Guide to the Human Genome
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Name: SIGLEC12 Sequence: fasta or formatted (477aa) NCBI GI: 16506826
Description:

sialic acid binding immunoglobulin-like lectin-like protein 1 isoform b precursor

Referenced in:

Lectin Families

Other entries for this name:
alt prot [595aa] sialic acid binding immunoglobulin-like lectin-like protein 1 iso...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         33           1
 C cysteine            2.1         10           1
 D aspartate           4.0         19           2
 E glutamate           5.0         24           2
 F phenylalanine       2.5         12           1
 G glycine             8.2         39           2
 H histidine           2.5         12           2
 I isoleucine          3.8         18           2
 K lysine              2.5         12           2
 L leucine             9.4         45           3
 M methionine          1.7          8           1
 N asparagine          3.4         16           2
 P proline             8.4         40           2
 Q glutamine           4.4         21           1
 R arginine            4.8         23           1
 S serine             11.1         53           2
 T threonine           7.3         35           2
 V valine              6.7         32           3
 W tryptophan          2.1         10           1
 Y tyrosine            3.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sialic acid binding immunoglobulin-like lectin-like ... 
SIGLEC12              0.948   sialic acid binding immunoglobulin-like lectin-like ...
SIGLEC7               0.637   sialic acid binding Ig-like lectin 7 isoform 1 
SIGLEC8               0.635   sialic acid binding Ig-like lectin 8 
SIGLEC9               0.603   sialic acid binding Ig-like lectin 9 
SIGLEC6               0.416   sialic acid binding Ig-like lectin 6 isoform 1 prec...
SIGLEC6               0.387   sialic acid binding Ig-like lectin 6 isoform 2 prec...
SIGLEC6               0.360   sialic acid binding Ig-like lectin 6 isoform 3 prec...
SIGLEC7               0.348   sialic acid binding Ig-like lectin 7 isoform 2 [Hom...
SIGLEC14              0.322   sialic acid binding Ig-like lectin 14 
SIGLEC5               0.301   sialic acid binding Ig-like lectin 5 
CD33                  0.279   CD33 antigen isoform 1 precursor 
SIGLEC10              0.258   sialic acid binding Ig-like lectin 10 
SIGLEC11              0.224   sialic acid binding Ig-like lectin 11 isoform 2 [Ho...
SIGLEC11              0.224   sialic acid binding Ig-like lectin 11 isoform 1 [Ho...
CD33                  0.130   CD33 antigen isoform 2 precursor 
MAG                   0.097   myelin associated glycoprotein isoform a precursor [...
MAG                   0.097   myelin associated glycoprotein isoform b precursor [...
SIGLEC1               0.074   sialoadhesin precursor 
CD22                  0.064   CD22 molecule 
IGSF9B                0.033   immunoglobulin superfamily, member 9B 
MYLK                  0.033   myosin light chain kinase isoform 3A 
MYLK                  0.033   myosin light chain kinase isoform 1 
HSPG2                 0.032   heparan sulfate proteoglycan 2 
SIGLEC15              0.031   sialic acid binding Ig-like lectin 15 
HMCN2                 0.031   PREDICTED: hemicentin 2 
CEACAM6               0.030   carcinoembryonic antigen-related cell adhesion molec...
PXDNL                 0.030   peroxidasin homolog-like 
CEACAM8               0.030   carcinoembryonic antigen-related cell adhesion molec...
TTN                   0.030   titin isoform N2-A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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