Guide to the Human Genome
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Name: SLC35E1 Sequence: fasta or formatted (410aa) NCBI GI: 164607128
Description:

solute carrier family 35, member E1

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         39           4
 C cysteine            1.5          6           1
 D aspartate           2.2          9           1
 E glutamate           1.2          5           1
 F phenylalanine       4.1         17           2
 G glycine             6.1         25           2
 H histidine           3.2         13           2
 I isoleucine          4.9         20           2
 K lysine              3.7         15           2
 L leucine            13.4         55           4
 M methionine          2.2          9           2
 N asparagine          4.1         17           2
 P proline             7.3         30           2
 Q glutamine           2.4         10           2
 R arginine            4.4         18           1
 S serine              9.8         40           3
 T threonine           4.6         19           2
 V valine              9.3         38           2
 W tryptophan          2.0          8           1
 Y tyrosine            4.1         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 35, member E1 
LOC728661             0.124   similar to solute carrier family 35, member E2 [Hom...
SLC35E4               0.051   solute carrier family 35, member E4 
SLC35E3               0.049   solute carrier family 35, member E2 
SLC35C1               0.034   GDP-fucose transporter 1 isoform a 
SLC35C1               0.034   GDP-fucose transporter 1 isoform b 
SLC35C1               0.034   GDP-fucose transporter 1 isoform b 
SLC35D1               0.030   solute carrier family 35 (UDP-glucuronic acid/UDP-N-...
SLC35B1               0.021   solute carrier family 35, member B1 
TAF4                  0.015   TBP-associated factor 4 
SLC35E2               0.014   solute carrier family 35, member E2 
ZIC5                  0.013   zinc finger protein of the cerebellum 5 
SYVN1                 0.011   synoviolin 1 isoform b 
SYVN1                 0.011   synoviolin 1 isoform a 
FUSSEL18              0.011   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.011   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.011   PREDICTED: functional smad suppressing element 18 [...
LOC100290551          0.011   PREDICTED: hypothetical protein XP_002346417 
LOC100287437          0.011   PREDICTED: hypothetical protein XP_002342117 
C2orf18               0.011   ANT2-binding protein 
MYO15A                0.010   myosin XV 
SETD1A                0.010   SET domain containing 1A 
AGAP2                 0.010   centaurin, gamma 1 isoform PIKE-L 
WAS                   0.010   Wiskott-Aldrich syndrome protein 
VASP                  0.010   vasodilator-stimulated phosphoprotein 
LOC390595             0.010   PREDICTED: similar to ubiquitin-associated protein ...
LOC390595             0.010   PREDICTED: similar to ubiquitin-associated protein ...
LOC390595             0.010   PREDICTED: hypothetical protein 
NRG2                  0.010   neuregulin 2 isoform 2 
NRG2                  0.010   neuregulin 2 isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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