Search of human proteins with 164519026

Search of human proteins with 164519026

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens]
         (653 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens]             1358   0.0  
gi|31543093 galactosidase, beta 1-like 2 [Homo sapiens]               744   0.0  
gi|40255043 galactosidase, beta 1-like [Homo sapiens]                 358   1e-98
gi|119372312 galactosidase, beta 1 isoform b [Homo sapiens]           344   1e-94
gi|119372308 galactosidase, beta 1 isoform a preproprotein [Homo...   344   1e-94
gi|208022658 galactosidase, beta 1 isoform c preproprotein [Homo...   171   2e-42
gi|19923345 RNA binding motif protein 12 [Homo sapiens]                32   1.8  
gi|23510462 RNA binding motif protein 12 [Homo sapiens]                32   1.8  
gi|116812620 hypothetical protein LOC147965 [Homo sapiens]             31   3.1  
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              31   4.1  
gi|226958414 isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...    30   9.1  
gi|110431348 deleted in colorectal carcinoma [Homo sapiens]            30   9.1  
gi|157694524 plexin D1 [Homo sapiens]                                  30   9.1  

>gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens]
          Length = 653

 Score = 1358 bits (3516), Expect = 0.0
 Identities = 653/653 (100%), Positives = 653/653 (100%)

Query: 1   MKSPPLLSPCLSWKRMAGIFFLPFISSGFAPRFKQEENFMLGRAHPSQPRFNWSHLTPLE 60
           MKSPPLLSPCLSWKRMAGIFFLPFISSGFAPRFKQEENFMLGRAHPSQPRFNWSHLTPLE
Sbjct: 1   MKSPPLLSPCLSWKRMAGIFFLPFISSGFAPRFKQEENFMLGRAHPSQPRFNWSHLTPLE 60

Query: 61  LKNRSVGLGTESTGRGKPHFTLEGHKFLIFGGSIHYFRVPREYWRDRLLKLKACGFNTVT 120
           LKNRSVGLGTESTGRGKPHFTLEGHKFLIFGGSIHYFRVPREYWRDRLLKLKACGFNTVT
Sbjct: 61  LKNRSVGLGTESTGRGKPHFTLEGHKFLIFGGSIHYFRVPREYWRDRLLKLKACGFNTVT 120

Query: 121 TYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPGRYICSEMDLGGLPSWLLQ 180
           TYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPGRYICSEMDLGGLPSWLLQ
Sbjct: 121 TYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPGRYICSEMDLGGLPSWLLQ 180

Query: 181 DPRLLLRTTNKSFIEAVEKYFDHLIPRVIPLQYRQAGPVIAVQVENEYGSFNKDKTYMPY 240
           DPRLLLRTTNKSFIEAVEKYFDHLIPRVIPLQYRQAGPVIAVQVENEYGSFNKDKTYMPY
Sbjct: 181 DPRLLLRTTNKSFIEAVEKYFDHLIPRVIPLQYRQAGPVIAVQVENEYGSFNKDKTYMPY 240

Query: 241 LHKALLRRGIVELLLTSDGEKHVLSGHTKGVLAAINLQKLHQDTFNQLHKVQRDKPLLIM 300
           LHKALLRRGIVELLLTSDGEKHVLSGHTKGVLAAINLQKLHQDTFNQLHKVQRDKPLLIM
Sbjct: 241 LHKALLRRGIVELLLTSDGEKHVLSGHTKGVLAAINLQKLHQDTFNQLHKVQRDKPLLIM 300

Query: 301 EYWVGWFDRWGDKHHVKDAKEVEHAVSEFIKYEISFNVYMFHGGTNFGFMNGATYFGKHS 360
           EYWVGWFDRWGDKHHVKDAKEVEHAVSEFIKYEISFNVYMFHGGTNFGFMNGATYFGKHS
Sbjct: 301 EYWVGWFDRWGDKHHVKDAKEVEHAVSEFIKYEISFNVYMFHGGTNFGFMNGATYFGKHS 360

Query: 361 GIVTSYDYDAVLTEAGDYTEKYLKLQKLFQSVSATPLPRVPKLPPKAVYPPVRPSLYLPL 420
           GIVTSYDYDAVLTEAGDYTEKYLKLQKLFQSVSATPLPRVPKLPPKAVYPPVRPSLYLPL
Sbjct: 361 GIVTSYDYDAVLTEAGDYTEKYLKLQKLFQSVSATPLPRVPKLPPKAVYPPVRPSLYLPL 420

Query: 421 WDALSYLNEPVRSRQPVNMENLPINNGSGQSYGLVLYEKSICSGGRLRAHAHDVAQVFLD 480
           WDALSYLNEPVRSRQPVNMENLPINNGSGQSYGLVLYEKSICSGGRLRAHAHDVAQVFLD
Sbjct: 421 WDALSYLNEPVRSRQPVNMENLPINNGSGQSYGLVLYEKSICSGGRLRAHAHDVAQVFLD 480

Query: 481 ETMIGILNENNKDLHIPELRDCRYLRILVENQGRVNFSWQIQNEQKGITGSVSINNSSLE 540
           ETMIGILNENNKDLHIPELRDCRYLRILVENQGRVNFSWQIQNEQKGITGSVSINNSSLE
Sbjct: 481 ETMIGILNENNKDLHIPELRDCRYLRILVENQGRVNFSWQIQNEQKGITGSVSINNSSLE 540

Query: 541 GFTIYSLEMKMSFFERLRSATWKPVPDSHQGPAFYCGTLKAGPSPKDTFLSLLNWNYGFV 600
           GFTIYSLEMKMSFFERLRSATWKPVPDSHQGPAFYCGTLKAGPSPKDTFLSLLNWNYGFV
Sbjct: 541 GFTIYSLEMKMSFFERLRSATWKPVPDSHQGPAFYCGTLKAGPSPKDTFLSLLNWNYGFV 600

Query: 601 FINGRNLGRYWNIGPQKTLYLPGVWLHPEDNEVILFEKMMSGSDIKSTDKPTL 653
           FINGRNLGRYWNIGPQKTLYLPGVWLHPEDNEVILFEKMMSGSDIKSTDKPTL
Sbjct: 601 FINGRNLGRYWNIGPQKTLYLPGVWLHPEDNEVILFEKMMSGSDIKSTDKPTL 653


>gi|31543093 galactosidase, beta 1-like 2 [Homo sapiens]
          Length = 636

 Score =  744 bits (1922), Expect = 0.0
 Identities = 365/608 (60%), Positives = 442/608 (72%), Gaps = 11/608 (1%)

Query: 50  RFNWSHLTPLELKNRSVGLGTESTGRGKPHFTLEGHKFLIFGGSIHYFRVPREYWRDRLL 109
           R +WS L PL L++R +GL  +       +F LE   F IFGGSIHYFRVPREYWRDRLL
Sbjct: 29  RLDWSTLVPLRLRHRQLGLQAKGW-----NFMLEDSTFWIFGGSIHYFRVPREYWRDRLL 83

Query: 110 KLKACGFNTVTTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPGRYICSEM 169
           K+KACG NT+TTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPG YICSEM
Sbjct: 84  KMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPGPYICSEM 143

Query: 170 DLGGLPSWLLQDPRLLLRTTNKSFIEAVEKYFDHLIPRVIPLQYRQAGPVIAVQVENEYG 229
           DLGGLPSWLLQDP + LRTT K F EAV+ YFDHL+ RV+PLQY++ GP+IAVQVENEYG
Sbjct: 144 DLGGLPSWLLQDPGMRLRTTYKGFTEAVDLYFDHLMSRVVPLQYKRGGPIIAVQVENEYG 203

Query: 230 SFNKDKTYMPYLHKALLRRGIVELLLTSDGEKHVLSGHTKGVLAAINLQKLHQ----DTF 285
           S+NKD  YMPY+ KAL  RGIVELLLTSD +  +  G  +GVLA INLQ  H+     TF
Sbjct: 204 SYNKDPAYMPYVKKALEDRGIVELLLTSDNKDGLSKGIVQGVLATINLQSTHELQLLTTF 263

Query: 286 NQLHKVQRDKPLLIMEYWVGWFDRWGDKHHVKDAKEVEHAVSEFIKYEISFNVYMFHGGT 345
             L  VQ  +P ++MEYW GWFD WG  H++ D+ EV   VS  +    S N+YMFHGGT
Sbjct: 264 --LFNVQGTQPKMVMEYWTGWFDSWGGPHNILDSSEVLKTVSAIVDAGSSINLYMFHGGT 321

Query: 346 NFGFMNGATYFGKHSGIVTSYDYDAVLTEAGDYTEKYLKLQKLFQSVSATPLPRVPKLPP 405
           NFGFMNGA +F  +   VTSYDYDAVLTEAGDYT KY+KL+  F S+S  PLP  P L P
Sbjct: 322 NFGFMNGAMHFHDYKSDVTSYDYDAVLTEAGDYTAKYMKLRDFFGSISGIPLPPPPDLLP 381

Query: 406 KAVYPPVRPSLYLPLWDALSYLNEPVRSRQPVNMENLPINNGSGQSYGLVLYEKSICSGG 465
           K  Y P+ P LYL LWDAL YL EP++S +P+NMENLP+N G+GQS+G +LYE SI S G
Sbjct: 382 KMPYEPLTPVLYLSLWDALKYLGEPIKSEKPINMENLPVNGGNGQSFGYILYETSITSSG 441

Query: 466 RLRAHAHDVAQVFLDETMIGILNENNKDLHIPELRDCRYLRILVENQGRVNFSWQIQNEQ 525
            L  H HD  QVF++   IG L+     + +P ++    LRILVEN+GRVN+   I +++
Sbjct: 442 ILSGHVHDRGQVFVNTVSIGFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQR 501

Query: 526 KGITGSVSINNSSLEGFTIYSLEMKMSFFERLRSATWKPVPDSHQGPAFYCGTLKAGPSP 585
           KG+ G++ +N+S L+ F IYSL+MK SFF+R     W  +P++   PAF+ G+L    +P
Sbjct: 502 KGLIGNLYLNDSPLKNFRIYSLDMKKSFFQRFGLDKWSSLPETPTLPAFFLGSLSISSTP 561

Query: 586 KDTFLSLLNWNYGFVFINGRNLGRYWNIGPQKTLYLPGVWLHPEDNEVILFEKMMSGSDI 645
            DTFL L  W  G VFING+NLGRYWNIGPQKTLYLPG WL    N+VI+FE+ M+G  +
Sbjct: 562 CDTFLKLEGWEKGVVFINGQNLGRYWNIGPQKTLYLPGPWLSSGINQVIVFEETMAGPAL 621

Query: 646 KSTDKPTL 653
           + T+ P L
Sbjct: 622 QFTETPHL 629


>gi|40255043 galactosidase, beta 1-like [Homo sapiens]
          Length = 654

 Score =  358 bits (918), Expect = 1e-98
 Identities = 227/606 (37%), Positives = 317/606 (52%), Gaps = 42/606 (6%)

Query: 75  RGKPHFTLEGHKFLIFGGSIHYFRVPREYWRDRLLKLKACGFNTVTTYVPWNLHEPERGK 134
           RG   F L+G  F    GS+HYFRVPR  W DRLLK++  G N +  YVPWN HEP+ G 
Sbjct: 34  RGHDRFLLDGAPFRYVSGSLHYFRVPRVLWADRLLKMRWSGLNAIQFYVPWNYHEPQPGV 93

Query: 135 FDFSGNLDLEAFVLMAAEIGLWVILRPGRYICSEMDLGGLPSWLLQDPRLLLRTTNKSFI 194
           ++F+G+ DL AF+  AA   L VILRPG YIC+E ++GGLPSWLL+ P + LRT++  F+
Sbjct: 94  YNFNGSRDLIAFLNEAALANLLVILRPGPYICAEWEMGGLPSWLLRKPEIHLRTSDPDFL 153

Query: 195 EAVEKYFDHLIPRVIPLQYRQAGPVIAVQVENEYGSFNK-DKTYMPY---LHKALLRRGI 250
            AV+ +F  L+P++ P  Y   G +I++QVENEYGS+   D +YM +   L +ALL   I
Sbjct: 154 AAVDSWFKVLLPKIYPWLYHNGGNIISIQVENEYGSYRACDFSYMRHLAGLFRALLGEKI 213

Query: 251 VELLLTSDGEKHVLSGHTKGVLAAINLQKLHQDT--FNQLHKVQRDKPLLIMEYWVGWFD 308
             LL T+DG + +  G  +G+   ++       T  F  L K +   PL+  EY+ GW D
Sbjct: 214 --LLFTTDGPEGLKCGSLRGLYTTVDFGPADNMTKIFTLLRKYEPHGPLVNSEYYTGWLD 271

Query: 309 RWGDKHHVKDAKEVEHAVSEFIKYEISFNVYMFHGGTNFGFMNGATYFGKHSGIVTSYDY 368
            WG  H  +    V   +   +K   S N+YMFHGGTNFG+ NGA   G+   I TSYDY
Sbjct: 272 YWGQNHSTRSVSAVTKGLENMLKLGASVNMYMFHGGTNFGYWNGADKKGRFLPITTSYDY 331

Query: 369 DAVLTEAGDYTEKYLKLQKLFQSVSATPLPRVPKLPPKAVYPPVRPSLYLPLWDALSYL- 427
           DA ++EAGD T K   L+ +       PL  +P   PK +  PV   L   L   L  L 
Sbjct: 332 DAPISEAGDPTPKLFALRDVISKFQEVPLGPLPPPSPKMMLGPVTLHLVGHLLAFLDLLC 391

Query: 428 -NEPVRSRQPVNMENLPINNGSGQSYGLVLYEKS------------ICSGGRLRAHAHDV 474
              P+ S  P+  E +       Q +G +LY               + + G      HD 
Sbjct: 392 PRGPIHSILPMTFEAVK------QDHGFMLYRTYMTHTIFEPTPFWVPNNG-----VHDR 440

Query: 475 AQVFLDETMIGILNENNKDLHIPELRDCRYLRILVENQGRVNFSWQIQNEQKGITGSVSI 534
           A V +D    G++  N +D      +    L ILVEN GR++F     ++ KG+     +
Sbjct: 441 AYVMVDGVFQGVVERNMRDKLFLTGKLGSKLDILVENMGRLSFG-SNSSDFKGLLKPPIL 499

Query: 535 NNSSLEGFTIYSLEMK--MSFFERLRSATWKPVPDSHQGPAFYCGTLKAGPSPKDTFLSL 592
             + L  + ++ L++   + ++  L+   W P P +  GP FY  T     S  DTFL L
Sbjct: 500 GQTILTQWMMFPLKIDNLVKWWFPLQLPKW-PYPQAPSGPTFYSKTFPILGSVGDTFLYL 558

Query: 593 LNWNYGFVFINGRNLGRYW-NIGPQKTLYLPGVWLHPED--NEVIL--FEKMMSGSDIKS 647
             W  G V+ING NLGRYW   GPQ+TLY+P   L P    N++ L   E +     ++ 
Sbjct: 559 PGWTKGQVWINGFNLGRYWTKQGPQQTLYVPRFLLFPRGALNKITLLELEDVPLQPQVQF 618

Query: 648 TDKPTL 653
            DKP L
Sbjct: 619 LDKPIL 624


>gi|119372312 galactosidase, beta 1 isoform b [Homo sapiens]
          Length = 647

 Score =  344 bits (883), Expect = 1e-94
 Identities = 215/574 (37%), Positives = 305/574 (53%), Gaps = 41/574 (7%)

Query: 80  FTLEGHKFLIFGGSIHYFRVPREYWRDRLLKLKACGFNTVTTYVPWNLHEPERGKFDFSG 139
           F  +G  F    GSIHY RVPR YW+DRLLK+K  G N + TYVPWN HEP  G++ FS 
Sbjct: 11  FLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSE 70

Query: 140 NLDLEAFVLMAAEIGLWVILRPGRYICSEMDLGGLPSWLLQDPRLLLRTTNKSFIEAVEK 199
           + D+E F+ +A E+GL VILRPG YIC+E ++GGLP+WLL+   +LLR+++  ++ AV+K
Sbjct: 71  DHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVDK 130

Query: 200 YFDHLIPRVIPLQYRQAGPVIAVQVENEYGS-FNKDKTYMPYLHKALLRR-GIVELLLTS 257
           +   L+P++ PL Y+  GPVI VQVENEYGS F  D  Y+ +L K      G   +L T+
Sbjct: 131 WLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFTT 190

Query: 258 DG--EKHVLSGHTKGVLAAINLQKLHQ--DTFNQLHKVQRDKPLLIMEYWVGWFDRWGDK 313
           DG  +  +  G  +G+   ++        D F    K +   PL+  E++ GW D WG  
Sbjct: 191 DGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQP 250

Query: 314 HHVKDAKEVEHAVSEFIKYEISFNVYMFHGGTNFGFMNGATYFGKHSGIVTSYDYDAVLT 373
           H     + V  ++ + +    S N+YMF GGTNF + NGA     ++   TSYDYDA L+
Sbjct: 251 HSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGAN--SPYAAQPTSYDYDAPLS 308

Query: 374 EAGDYTEKYLKLQKLFQSVSATPLPRVPKLPPKAVYPPVRPSLYLPLWDALSYL--NEPV 431
           EAGD TEKY  L+ + Q     P   +P   PK  Y  V       +  AL  L  + P+
Sbjct: 309 EAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPI 368

Query: 432 RSRQPVNMENLPINNGSGQSYGLVLYEKSI---CSGGRLRAH----AHDVAQVFLDETMI 484
           +S  P+    +       Q YG VLY  ++   CS     +      HD A V +D    
Sbjct: 369 KSLYPLTFIQVK------QHYGFVLYRTTLPQDCSNPAPLSSPLNGVHDRAYVAVDGIPQ 422

Query: 485 GILNENNKDLHIPELRDCRYLRILVENQGRVNFSWQIQNEQKGITGSVSINNSSLEGFTI 544
           G+L  NN        +    L +LVEN GRVN+   I N+ KG+  +++++++ L  +TI
Sbjct: 423 GVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYI-NDFKGLVSNLTLSSNILTDWTI 481

Query: 545 YSLEMKMSFFERL----------RSATWKPVPDSHQGPAFYCGTLKAGPS-----PKDTF 589
           + L+ + +    L              W     ++  PAFY G     PS     P+DTF
Sbjct: 482 FPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFYMGNFSI-PSGIPDLPQDTF 540

Query: 590 LSLLNWNYGFVFINGRNLGRYWNI-GPQKTLYLP 622
           +    W  G V+ING NLGRYW   GPQ TL++P
Sbjct: 541 IQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVP 574


>gi|119372308 galactosidase, beta 1 isoform a preproprotein [Homo
           sapiens]
          Length = 677

 Score =  344 bits (883), Expect = 1e-94
 Identities = 215/574 (37%), Positives = 305/574 (53%), Gaps = 41/574 (7%)

Query: 80  FTLEGHKFLIFGGSIHYFRVPREYWRDRLLKLKACGFNTVTTYVPWNLHEPERGKFDFSG 139
           F  +G  F    GSIHY RVPR YW+DRLLK+K  G N + TYVPWN HEP  G++ FS 
Sbjct: 41  FLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSE 100

Query: 140 NLDLEAFVLMAAEIGLWVILRPGRYICSEMDLGGLPSWLLQDPRLLLRTTNKSFIEAVEK 199
           + D+E F+ +A E+GL VILRPG YIC+E ++GGLP+WLL+   +LLR+++  ++ AV+K
Sbjct: 101 DHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVDK 160

Query: 200 YFDHLIPRVIPLQYRQAGPVIAVQVENEYGS-FNKDKTYMPYLHKALLRR-GIVELLLTS 257
           +   L+P++ PL Y+  GPVI VQVENEYGS F  D  Y+ +L K      G   +L T+
Sbjct: 161 WLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFTT 220

Query: 258 DG--EKHVLSGHTKGVLAAINLQKLHQ--DTFNQLHKVQRDKPLLIMEYWVGWFDRWGDK 313
           DG  +  +  G  +G+   ++        D F    K +   PL+  E++ GW D WG  
Sbjct: 221 DGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQP 280

Query: 314 HHVKDAKEVEHAVSEFIKYEISFNVYMFHGGTNFGFMNGATYFGKHSGIVTSYDYDAVLT 373
           H     + V  ++ + +    S N+YMF GGTNF + NGA     ++   TSYDYDA L+
Sbjct: 281 HSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGAN--SPYAAQPTSYDYDAPLS 338

Query: 374 EAGDYTEKYLKLQKLFQSVSATPLPRVPKLPPKAVYPPVRPSLYLPLWDALSYL--NEPV 431
           EAGD TEKY  L+ + Q     P   +P   PK  Y  V       +  AL  L  + P+
Sbjct: 339 EAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPI 398

Query: 432 RSRQPVNMENLPINNGSGQSYGLVLYEKSI---CSGGRLRAH----AHDVAQVFLDETMI 484
           +S  P+    +       Q YG VLY  ++   CS     +      HD A V +D    
Sbjct: 399 KSLYPLTFIQVK------QHYGFVLYRTTLPQDCSNPAPLSSPLNGVHDRAYVAVDGIPQ 452

Query: 485 GILNENNKDLHIPELRDCRYLRILVENQGRVNFSWQIQNEQKGITGSVSINNSSLEGFTI 544
           G+L  NN        +    L +LVEN GRVN+   I N+ KG+  +++++++ L  +TI
Sbjct: 453 GVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYI-NDFKGLVSNLTLSSNILTDWTI 511

Query: 545 YSLEMKMSFFERL----------RSATWKPVPDSHQGPAFYCGTLKAGPS-----PKDTF 589
           + L+ + +    L              W     ++  PAFY G     PS     P+DTF
Sbjct: 512 FPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFYMGNFSI-PSGIPDLPQDTF 570

Query: 590 LSLLNWNYGFVFINGRNLGRYWNI-GPQKTLYLP 622
           +    W  G V+ING NLGRYW   GPQ TL++P
Sbjct: 571 IQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVP 604


>gi|208022658 galactosidase, beta 1 isoform c preproprotein [Homo
           sapiens]
          Length = 546

 Score =  171 bits (433), Expect = 2e-42
 Identities = 121/365 (33%), Positives = 173/365 (47%), Gaps = 35/365 (9%)

Query: 283 DTFNQLHKVQRDKPLLIMEYWVGWFDRWGDKHHVKDAKEVEHAVSEFIKYEISFNVYMFH 342
           D F    K +   PL+  E++ GW D WG  H     + V  ++ + +    S N+YMF 
Sbjct: 119 DAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFI 178

Query: 343 GGTNFGFMNGATYFGKHSGIVTSYDYDAVLTEAGDYTEKYLKLQKLFQSVSATPLPRVPK 402
           GGTNF + NGA     ++   TSYDYDA L+EAGD TEKY  L+ + Q     P   +P 
Sbjct: 179 GGTNFAYWNGAN--SPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPP 236

Query: 403 LPPKAVYPPVRPSLYLPLWDALSYL--NEPVRSRQPVNMENLPINNGSGQSYGLVLYEKS 460
             PK  Y  V       +  AL  L  + P++S  P+    +       Q YG VLY  +
Sbjct: 237 STPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVK------QHYGFVLYRTT 290

Query: 461 I---CSGGRLRAH----AHDVAQVFLDETMIGILNENNKDLHIPELRDCRYLRILVENQG 513
           +   CS     +      HD A V +D    G+L  NN        +    L +LVEN G
Sbjct: 291 LPQDCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMG 350

Query: 514 RVNFSWQIQNEQKGITGSVSINNSSLEGFTIYSLEMKMSFFERL----------RSATWK 563
           RVN+   I N+ KG+  +++++++ L  +TI+ L+ + +    L              W 
Sbjct: 351 RVNYGAYI-NDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWA 409

Query: 564 PVPDSHQGPAFYCGTLKAGPS-----PKDTFLSLLNWNYGFVFINGRNLGRYWNI-GPQK 617
               ++  PAFY G     PS     P+DTF+    W  G V+ING NLGRYW   GPQ 
Sbjct: 410 HNSSNYTLPAFYMGNFSI-PSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQL 468

Query: 618 TLYLP 622
           TL++P
Sbjct: 469 TLFVP 473



 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 23/42 (54%), Positives = 27/42 (64%)

Query: 80  FTLEGHKFLIFGGSIHYFRVPREYWRDRLLKLKACGFNTVTT 121
           F  +G  F    GSIHY RVPR YW+DRLLK+K  G N + T
Sbjct: 41  FLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQT 82


>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
          Length = 932

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 9/59 (15%)

Query: 396 PLPRVPKLPPKAVYPPVRPSLYLPLWDALSYLNEPVRSRQPVNMENLPINNGSGQSYGL 454
           P+P VP +PP    PP+ P   LP    +  LN P  +  P  M      NGSG    L
Sbjct: 219 PVPPVPPIPPVPSVPPMTP---LPPMSGMPPLNPPPVAPLPAGM------NGSGAPMNL 268


>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
          Length = 932

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 9/59 (15%)

Query: 396 PLPRVPKLPPKAVYPPVRPSLYLPLWDALSYLNEPVRSRQPVNMENLPINNGSGQSYGL 454
           P+P VP +PP    PP+ P   LP    +  LN P  +  P  M      NGSG    L
Sbjct: 219 PVPPVPPIPPVPSVPPMTP---LPPMSGMPPLNPPPVAPLPAGM------NGSGAPMNL 268


>gi|116812620 hypothetical protein LOC147965 [Homo sapiens]
          Length = 349

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 387 KLFQSVSATPLPRVPKLPPKAVYPPVRPSLYLPLWDALSYLNEPVRSR 434
           +L Q + A      P LPP ++ P +  SL  P W+AL  L++ +R +
Sbjct: 177 QLLQELHAKISELQPSLPPGSLQPLLSCSLDAPRWEALESLSQSLRDQ 224


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 9/57 (15%)

Query: 391 SVSATPLPRVPKLPPKAVY-------PPVRPSLYLPLWDALSYLNEP--VRSRQPVN 438
           ++ A P P+ P  PPKA+Y       PP+ P  + P W  +    +P  ++ R P++
Sbjct: 686 TLGAVPAPQAPPPPPKALYPGALGRPPPMPPMNFDPRWMMIPPYVDPRLLQGRPPLD 742


>gi|226958414 isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo
           sapiens]
          Length = 396

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 18/139 (12%)

Query: 404 PPKAVYPPVRPSLYLPLWDALSYLNEPVRSRQPVNMENLPI--------NNGSGQSY--- 452
           PP A +   R    LP+ DA++ L+E  R      + NL +          GSG  Y   
Sbjct: 22  PPLAGFVSQRAHSLLPVDDAINGLSEEQRQEFWKQLGNLGVLGITAPVQYGGSGLGYLEH 81

Query: 453 GLVLYEKSICSGG-RLRAHAHDVAQVFLDETMIGILNENNKDLHIPELRDCRYLRILV-- 509
            LV+ E S  SG   L   AH    +     ++   NE  K+ ++P+L    Y+  L   
Sbjct: 82  VLVMEEISRASGAVGLSYGAHSNLCI---NQLVRNGNEAQKEKYLPKLISGEYIGALAMS 138

Query: 510 -ENQGRVNFSWQIQNEQKG 527
             N G    S +++ E+KG
Sbjct: 139 EPNAGSDVVSMKLKAEKKG 157


>gi|110431348 deleted in colorectal carcinoma [Homo sapiens]
          Length = 1447

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 614  GPQKTLYLPGVWLHPEDNEVILFEKMMSGSDIKSTDKP 651
            G QK L  P +W+H E+ E+   EK  SG+D    D P
Sbjct: 1143 GSQKDLRPPDLWIHHEEMEMKNIEK-PSGTDPAGRDSP 1179


>gi|157694524 plexin D1 [Homo sapiens]
          Length = 1925

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 277  LQKLHQDTFNQLHKVQRDKPLLIMEYWVGWFDRWGDKHHVKD 318
            LQK   D F  +  ++ DKP L ++Y+  + +   +K  + D
Sbjct: 1714 LQKFLDDLFKAILSIREDKPPLAVKYFFDFLEEQAEKRGISD 1755


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.139    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,039,979
Number of Sequences: 37866
Number of extensions: 1286914
Number of successful extensions: 3063
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3013
Number of HSP's gapped (non-prelim): 32
length of query: 653
length of database: 18,247,518
effective HSP length: 109
effective length of query: 544
effective length of database: 14,120,124
effective search space: 7681347456
effective search space used: 7681347456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.