Guide to the Human Genome
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Name: KIAA0195 Sequence: fasta or formatted (1356aa) NCBI GI: 157502197
Description:

hypothetical protein LOC9772

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         70           2
 C cysteine            3.3         45           2
 D aspartate           4.7         64           2
 E glutamate           5.7         77           3
 F phenylalanine       4.1         55           2
 G glycine             5.7         77           2
 H histidine           3.5         47           2
 I isoleucine          4.4         59           2
 K lysine              3.5         47           2
 L leucine            14.5        197           5
 M methionine          2.1         29           1
 N asparagine          2.9         40           2
 P proline             6.3         86           3
 Q glutamine           4.5         61           2
 R arginine            5.0         68           2
 S serine             10.4        141           3
 T threonine           4.8         65           3
 V valine              6.0         81           3
 W tryptophan          1.8         25           2
 Y tyrosine            1.6         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC9772 
ATP2C2                0.005   ATPase, Ca++ transporting, type 2C, member 2 
TMCO7                 0.005   transmembrane and coiled-coil domains 7 
LOC100292392          0.004   PREDICTED: hypothetical protein 
LOC100287377          0.004   PREDICTED: hypothetical protein 
LOC100287377          0.004   PREDICTED: hypothetical protein XP_002342514 
ATP2A3                0.004   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.004   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.004   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.004   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.004   ATPase, Ca++ transporting, ubiquitous isoform b [Hom...
ATP2A3                0.004   ATPase, Ca++ transporting, ubiquitous isoform d [Hom...
ATP2A3                0.004   ATPase, Ca++ transporting, ubiquitous isoform e [Hom...
ATP2B1                0.004   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.004   plasma membrane calcium ATPase 1 isoform 1b 
ATP2A1                0.004   ATPase, Ca++ transporting, fast twitch 1 isoform b [...
ATP2A1                0.004   ATPase, Ca++ transporting, fast twitch 1 isoform a [...
TNRC18                0.004   trinucleotide repeat containing 18 
SPARCL1               0.003   SPARC-like 1 
SPARCL1               0.003   SPARC-like 1 
DOCK7                 0.003   dedicator of cytokinesis 7 
BNC2                  0.003   basonuclin 2 
ATP2B4                0.003   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.003   plasma membrane calcium ATPase 4 isoform 4b 
ATP2B3                0.003   plasma membrane calcium ATPase 3 isoform 3b 
ZNF828                0.003   zinc finger protein 828 
ATP2B3                0.003   plasma membrane calcium ATPase 3 isoform 3a 
AP3B2                 0.003   adaptor-related protein complex 3, beta 2 subunit [H...
CR2                   0.003   complement component (3d/Epstein Barr virus) recepto...
CR2                   0.003   complement component (3d/Epstein Barr virus) recepto...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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