Guide to the Human Genome
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Name: BNC2 Sequence: fasta or formatted (1099aa) NCBI GI: 94721327
Description:

basonuclin 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         56           2
 C cysteine            2.3         25           2
 D aspartate           5.8         64           3
 E glutamate           7.0         77           3
 F phenylalanine       2.9         32           1
 G glycine             5.4         59           3
 H histidine           4.0         44           2
 I isoleucine          4.1         45           2
 K lysine              5.0         55           3
 L leucine             8.4         92           3
 M methionine          3.4         37           2
 N asparagine          4.9         54           2
 P proline             7.4         81           4
 Q glutamine           3.4         37           2
 R arginine            5.8         64           2
 S serine             11.5        126           4
 T threonine           5.6         62           3
 V valine              5.3         58           2
 W tryptophan          0.5          5           1
 Y tyrosine            2.4         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   basonuclin 2 
BNC1                  0.329   basonuclin 1 
PELP1                 0.012   proline, glutamic acid and leucine rich protein 1 [...
ZNF521                0.011   zinc finger protein 521 
MYT1L                 0.010   myelin transcription factor 1-like 
MNT                   0.009   MAX binding protein 
WNK2                  0.009   WNK lysine deficient protein kinase 2 
PRR12                 0.009   proline rich 12 
C9orf86               0.009   Rab-like GTP-binding protein 1 isoform 1 
FLJ22184              0.008   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.008   PREDICTED: hypothetical protein LOC80164 
E4F1                  0.008   p120E4F 
ARAP1                 0.008   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ZNF407                0.008   zinc finger protein 407 isoform 3 
ZNF407                0.008   zinc finger protein 407 isoform 2 
HDAC7                 0.008   histone deacetylase 7 isoform d 
SAP130                0.008   Sin3A-associated protein, 130kDa isoform b 
SAP130                0.008   Sin3A-associated protein, 130kDa isoform a 
SALL1                 0.008   sal-like 1 isoform b 
SALL1                 0.008   sal-like 1 isoform a 
ZNF407                0.008   zinc finger protein 407 isoform 1 
RERE                  0.008   atrophin-1 like protein isoform b 
RERE                  0.008   atrophin-1 like protein isoform a 
RERE                  0.008   atrophin-1 like protein isoform a 
ZNF423                0.008   zinc finger protein 423 
ACRC                  0.008   ACRC protein 
MYST4                 0.008   MYST histone acetyltransferase (monocytic leukemia)...
SF3A1                 0.007   splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom...
SF3A1                 0.007   splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo...
LOC100290519          0.007   PREDICTED: hypothetical protein XP_002346939 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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