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Search of human proteins with 157388937
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157388937 syntaxin 17 [Homo sapiens]
(302 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157388937 syntaxin 17 [Homo sapiens] 587 e-168
gi|170932494 syntaxin 7 [Homo sapiens] 49 4e-06
gi|28933465 syntaxin 12 [Homo sapiens] 49 7e-06
gi|71061468 centromere protein E [Homo sapiens] 41 0.001
gi|118498362 kinectin 1 isoform b [Homo sapiens] 40 0.003
gi|118498368 kinectin 1 isoform c [Homo sapiens] 40 0.003
gi|4759184 syntaxin 3 [Homo sapiens] 39 0.004
gi|33946313 ninein isoform 4 [Homo sapiens] 38 0.010
gi|33946321 ninein isoform 5 [Homo sapiens] 38 0.010
gi|148536869 ninein isoform 2 [Homo sapiens] 38 0.013
gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens] 37 0.028
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 36 0.037
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 36 0.037
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 36 0.037
gi|112420968 coiled-coil domain containing 158 [Homo sapiens] 36 0.048
gi|148536871 ninein isoform 1 [Homo sapiens] 35 0.081
gi|51479166 bicaudal D homolog 2 isoform 1 [Homo sapiens] 35 0.081
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 35 0.081
gi|21735417 bicaudal D homolog 2 isoform 2 [Homo sapiens] 35 0.081
gi|117414154 sodium channel associated protein 2 isoform b [Homo... 35 0.11
gi|117414162 sodium channel associated protein 2 isoform a [Homo... 35 0.11
gi|171184451 centrosome-associated protein 350 [Homo sapiens] 35 0.11
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 34 0.14
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 34 0.14
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 34 0.14
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 34 0.14
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 34 0.14
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 34 0.14
gi|8394376 syntaxin 18 [Homo sapiens] 34 0.14
gi|49258196 syntaxin 19 [Homo sapiens] 34 0.14
>gi|157388937 syntaxin 17 [Homo sapiens]
Length = 302
Score = 587 bits (1514), Expect = e-168
Identities = 302/302 (100%), Positives = 302/302 (100%)
Query: 1 MSEDEEKVKLRRLEPAIQKFIKIVIPTDLERLRKHQINIEKYQRCRIWDKLHEEHINAGR 60
MSEDEEKVKLRRLEPAIQKFIKIVIPTDLERLRKHQINIEKYQRCRIWDKLHEEHINAGR
Sbjct: 1 MSEDEEKVKLRRLEPAIQKFIKIVIPTDLERLRKHQINIEKYQRCRIWDKLHEEHINAGR 60
Query: 61 TVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLESVEELKKQF 120
TVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLESVEELKKQF
Sbjct: 61 TVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLESVEELKKQF 120
Query: 121 NDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAESWETLEADLI 180
NDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAESWETLEADLI
Sbjct: 121 NDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAESWETLEADLI 180
Query: 181 ELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKYKLAALPVAGALIG 240
ELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKYKLAALPVAGALIG
Sbjct: 181 ELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKYKLAALPVAGALIG 240
Query: 241 GMVGGPIGLLAGFKVAGIAAALGGGVLGFTGGKLIQRKKQKMMEKLTSSCPDLPSQTDKK 300
GMVGGPIGLLAGFKVAGIAAALGGGVLGFTGGKLIQRKKQKMMEKLTSSCPDLPSQTDKK
Sbjct: 241 GMVGGPIGLLAGFKVAGIAAALGGGVLGFTGGKLIQRKKQKMMEKLTSSCPDLPSQTDKK 300
Query: 301 CS 302
CS
Sbjct: 301 CS 302
>gi|170932494 syntaxin 7 [Homo sapiens]
Length = 261
Score = 49.3 bits (116), Expect = 4e-06
Identities = 42/212 (19%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 38 NIEKYQRCRIWDKLHEEHINAGRTVQQLRSNIREIEKLCLKVRKDDLVLLKRM----IDP 93
NI+K +C + + + + +LR +++ ++ ++ K+ +K P
Sbjct: 21 NIQKITQCSVEIQRTLNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTP 80
Query: 94 VKE-----EASAATAEFLQLHLESVEELKKQFNDEETLLQPPLTRSMTVGGAFHTTEAEA 148
++ + AEF L + +++++Q + E + S V G+F ++
Sbjct: 81 SEQRQRKIQKDRLVAEFTT-SLTNFQKVQRQAAEREKEFVARVRASSRVSGSFPEDSSKE 139
Query: 149 SSQSLTQIYALPEIP-QDQNAAE-----------SWETLEADLIELSQLVTDFSLLVNSQ 196
+ + P++ QD+ E S LEAD+++++++ D ++++ Q
Sbjct: 140 RNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQ 199
Query: 197 QEKIDSIADHVNSAAVNVEEGTKNLGKAAKYK 228
+ IDSI +V +A V+V++ + L +AA Y+
Sbjct: 200 GDVIDSIEANVENAEVHVQQANQQLSRAADYQ 231
>gi|28933465 syntaxin 12 [Homo sapiens]
Length = 276
Score = 48.5 bits (114), Expect = 7e-06
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 140 AFHTTEAEASSQSLTQIYALPEIPQDQNAAESWET----LEADLIELSQLVTDFSLLVNS 195
+F + E QS A+ E QD + ET LEAD+++++Q+ D +++++
Sbjct: 154 SFDSHEEWNQMQSQEDEVAITE--QDLELIKERETAIRQLEADILDVNQIFKDLAMMIHD 211
Query: 196 QQEKIDSIADHVNSAAVNVEEGTKNLGKAAKYK 228
Q + IDSI +V S+ V+VE T+ L +AA Y+
Sbjct: 212 QGDLIDSIEANVESSEVHVERATEQLQRAAYYQ 244
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 41.2 bits (95), Expect = 0.001
Identities = 37/181 (20%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 49 DKLHEEHINAGRTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQL 108
DKL + + +L+ I+E LK + L+ LK+ ++ +++ S
Sbjct: 1802 DKLSNMQKDLENSNAKLQEKIQE-----LKANEHQLITLKKDVNETQKKVS--------- 1847
Query: 109 HLESVEELKKQFNDEETLLQPPLTRSMTVGGAFHTTEAEASS-----QSLTQIYALPEIP 163
+E+LKKQ D+ L ++ + H E S +L ++ ++
Sbjct: 1848 ---EMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLE 1904
Query: 164 QDQNAAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGK 223
+DQ ET DL E+ Q + +L +E +D + + ++ + + + K+L K
Sbjct: 1905 RDQLKESLQETKARDL-EIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDK 1963
Query: 224 A 224
+
Sbjct: 1964 S 1964
Score = 30.4 bits (67), Expect = 2.0
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 12/159 (7%)
Query: 70 REIEKLCLKVRKDDLVL--LKRMIDPVKEEASAATAEFLQLHLESVEELKKQFNDEETLL 127
+EI L + +K D L LK + +E T E +Q L +E+LK+Q + ++ L
Sbjct: 845 QEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTRE-VQERLNEMEQLKEQLENRDSTL 903
Query: 128 QPPLTRSMTVGGAFHTTEAEASS-----QSLTQIYALPEIPQDQNAAESWETLEADLIEL 182
Q + T E + L Q+ +I +DQ ++ +T+ ++
Sbjct: 904 QTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQ 963
Query: 183 SQLVTDFSLLVNSQQEKIDSIADHVN---SAAVNVEEGT 218
QL L QE I+++ ++ S +++EE T
Sbjct: 964 EQLRNALESL-KQHQETINTLKSKISEEVSRNLHMEENT 1001
Score = 29.3 bits (64), Expect = 4.5
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 50 KLHEEHINAGRTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLH 109
++ E + + +Q+ ++ + K KDDL L+ ++ ++ E + H
Sbjct: 1418 RIEIEMLGLSKRLQESHDEMKSVAK-----EKDDLQRLQEVLQSESDQLKENIKEIVAKH 1472
Query: 110 LESVEELK 117
LE+ EELK
Sbjct: 1473 LETEEELK 1480
>gi|118498362 kinectin 1 isoform b [Homo sapiens]
Length = 1306
Score = 39.7 bits (91), Expect = 0.003
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 1 MSEDEEKVKLRRLEPAIQKFIKIVIPTDLERLRKHQINIEKYQRCRIWD-KLHEEHINAG 59
+ E +E L +LE +K+ ++ T+ L+K Q ++E+ + W K+ E H
Sbjct: 1099 LKEADEMHTLLQLE--CEKYKSVLAETE-GILQKLQRSVEQEENK--WKVKVDESH---- 1149
Query: 60 RTVQQLRSNIREIEKLCLKVRKD--DLVLLKRMIDPVKEEASAATAEFLQLHLESVEELK 117
+T++Q++S+ E+ ++R + D+ L+R + ++ E A E ++ V ELK
Sbjct: 1150 KTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMELEKAEME-RSTYVTEVRELK 1208
Query: 118 KQFNDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAESWET--- 174
Q N+ T L+ V G H + + A + +N+ S ET
Sbjct: 1209 AQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVKAAGDTTVIENSDVSPETESS 1268
Query: 175 -LEADLIELSQLVTDFSLLVNSQQEKIDSIADH 206
E + L+Q VT L+ + +++ +H
Sbjct: 1269 EKETMSVSLNQTVTQLQQLLQAVNQQLTKEKEH 1301
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 39.7 bits (91), Expect = 0.003
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 1 MSEDEEKVKLRRLEPAIQKFIKIVIPTDLERLRKHQINIEKYQRCRIWD-KLHEEHINAG 59
+ E +E L +LE +K+ ++ T+ L+K Q ++E+ + W K+ E H
Sbjct: 1093 LKEADEMHTLLQLE--CEKYKSVLAETE-GILQKLQRSVEQEENK--WKVKVDESH---- 1143
Query: 60 RTVQQLRSNIREIEKLCLKVRKD--DLVLLKRMIDPVKEEASAATAEFLQLHLESVEELK 117
+T++Q++S+ E+ ++R + D+ L+R + ++ E A E ++ V ELK
Sbjct: 1144 KTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMELEKAEME-RSTYVTEVRELK 1202
Query: 118 KQFNDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAESWET--- 174
Q N+ T L+ V G H + + A + +N+ S ET
Sbjct: 1203 AQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVKAAGDTTVIENSDVSPETESS 1262
Query: 175 -LEADLIELSQLVTDFSLLVNSQQEKIDSIADH 206
E + L+Q VT L+ + +++ +H
Sbjct: 1263 EKETMSVSLNQTVTQLQQLLQAVNQQLTKEKEH 1295
>gi|4759184 syntaxin 3 [Homo sapiens]
Length = 289
Score = 39.3 bits (90), Expect = 0.004
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 28/211 (13%)
Query: 57 NAGRTVQQLRSNIREIE---KLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLESV 113
N ++ + +I E E L++RK +L R V + + A +F + +
Sbjct: 90 NVRNKLKSMEKHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRI 149
Query: 114 EEL-----KKQFNDE-ETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQN 167
+ KK ++E E +L+ T G +++ S Q+L++I +
Sbjct: 150 QRQLEITGKKTTDEELEEMLESGNPAIFTSG----IIDSQISKQALSEI---------EG 196
Query: 168 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY 227
+ LE+ + EL + D ++LV +Q E +D+I +V +VE+ KA KY
Sbjct: 197 RHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKARDETKKAVKY 256
Query: 228 ------KLAALPVAGALIGGMVGGPIGLLAG 252
KL + V ++ G++ IGL G
Sbjct: 257 QSQARKKLIIIIVLVVVLLGILALIIGLSVG 287
>gi|33946313 ninein isoform 4 [Homo sapiens]
Length = 2096
Score = 38.1 bits (87), Expect = 0.010
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 11/191 (5%)
Query: 52 HEEHINAGRTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLE 111
H++H+N T+ N E EKL LK D + + + ++ E +HLE
Sbjct: 1894 HQKHLNPSGTM-----NPTEQEKLSLKRECDQFQKEQSPANRKVSQMNSLEQELETIHLE 1948
Query: 112 SVEELKKQFNDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAES 171
+ KKQ +E L++ RS A + A L Q A P +P++Q
Sbjct: 1949 NEGLKKKQVKLDEQLMEMQHLRST----ATPSPSPHAWDLQLLQQQACPMVPREQFLQLQ 2004
Query: 172 WETLEADLI--ELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKYKL 229
+ L+A+ I L + + + + N+ Q + + + + VE+ K + + + K+
Sbjct: 2005 RQLLQAERINQHLQEELENRTSETNTPQGNQEQLVTVMEERMIEVEQKLKLVKRLLQEKV 2064
Query: 230 AALPVAGALIG 240
L +L G
Sbjct: 2065 NQLKEQVSLPG 2075
>gi|33946321 ninein isoform 5 [Homo sapiens]
Length = 2090
Score = 38.1 bits (87), Expect = 0.010
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 11/191 (5%)
Query: 52 HEEHINAGRTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLE 111
H++H+N T+ N E EKL LK D + + + ++ E +HLE
Sbjct: 1888 HQKHLNPSGTM-----NPTEQEKLSLKRECDQFQKEQSPANRKVSQMNSLEQELETIHLE 1942
Query: 112 SVEELKKQFNDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAES 171
+ KKQ +E L++ RS A + A L Q A P +P++Q
Sbjct: 1943 NEGLKKKQVKLDEQLMEMQHLRST----ATPSPSPHAWDLQLLQQQACPMVPREQFLQLQ 1998
Query: 172 WETLEADLI--ELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKYKL 229
+ L+A+ I L + + + + N+ Q + + + + VE+ K + + + K+
Sbjct: 1999 RQLLQAERINQHLQEELENRTSETNTPQGNQEQLVTVMEERMIEVEQKLKLVKRLLQEKV 2058
Query: 230 AALPVAGALIG 240
L +L G
Sbjct: 2059 NQLKEQVSLPG 2069
>gi|148536869 ninein isoform 2 [Homo sapiens]
Length = 2133
Score = 37.7 bits (86), Expect = 0.013
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 11/183 (6%)
Query: 52 HEEHINAGRTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLE 111
H++H+N T+ N E EKL LK D + + + ++ E +HLE
Sbjct: 1888 HQKHLNPSGTM-----NPTEQEKLSLKRECDQFQKEQSPANRKVSQMNSLEQELETIHLE 1942
Query: 112 SVEELKKQFNDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAES 171
+ KKQ +E L++ RS A + A L Q A P +P++Q
Sbjct: 1943 NEGLKKKQVKLDEQLMEMQHLRST----ATPSPSPHAWDLQLLQQQACPMVPREQFLQLQ 1998
Query: 172 WETLEADLI--ELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKYKL 229
+ L+A+ I L + + + + N+ Q + + + + VE+ K + + + K+
Sbjct: 1999 RQLLQAERINQHLQEELENRTSETNTPQGNQEQLVTVMEERMIEVEQKLKLVKRLLQEKV 2058
Query: 230 AAL 232
L
Sbjct: 2059 NQL 2061
>gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]
Length = 1233
Score = 36.6 bits (83), Expect = 0.028
Identities = 51/250 (20%), Positives = 109/250 (43%), Gaps = 37/250 (14%)
Query: 7 KVKLRRLEPAIQKFIKIVIPTDLERLRKH------QINIEKYQRCRIWDKLHEEHINAGR 60
K ++ R + +Q F ++E+L K +I +K + ++ D+L E+ G+
Sbjct: 213 KDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGK 272
Query: 61 TV---QQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKE-EASAATAEFLQLHLE----- 111
+ QQ+ I+E + + R + + +K+ EA+ + + Q H +
Sbjct: 273 MMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRKGD 332
Query: 112 ---------SVEELKKQFND---EETLLQP-PLTRSMTVGGAFHTTEAEASSQSLTQIYA 158
SVE+ +++F + EE+ Q LT +H + EAS ++ T
Sbjct: 333 MDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQE 392
Query: 159 LPEIPQDQNAAESWETLEADLIELSQLVTDFSLL-----VNSQQEKIDSIADHVNSAAVN 213
L + +DQ A + DL E ++ T+ + + Q++I+ + +++ ++ +
Sbjct: 393 LEKFNRDQKADQD----RLDLEERKKVETEAKIKQKLREIEENQKRIEKLEEYITTSKQS 448
Query: 214 VEEGTKNLGK 223
+EE K G+
Sbjct: 449 LEEQKKLEGE 458
Score = 30.0 bits (66), Expect = 2.6
Identities = 52/265 (19%), Positives = 110/265 (41%), Gaps = 46/265 (17%)
Query: 4 DEEKVKL------RRLEPAIQKFIKIVIPTDLER--LRKHQINIEKYQRCRIWD-----K 50
+EEKVK +RLE QK ++ I D E+ L++ Q + +++ D K
Sbjct: 793 EEEKVKRQNEIAKKRLEFENQK-TRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEK 851
Query: 51 LHEEHINAGRTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEF--LQL 108
L +E + + + + +++++ L +K ++ ++ ++++ A E LQ
Sbjct: 852 LKKEEQRHMKIIDETMAQLQDLKNQHL-AKKSEVNDKNHEMEEIRKKLGGANKEMTHLQK 910
Query: 109 HLESVE-ELKKQFNDEETLLQP--------PLTRSMTVG-----GAFHTTEAEASSQSLT 154
+ ++E +L+++ +D LLQ PL++ G+ ++ + SQ ++
Sbjct: 911 EVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGEDSVSGSQRIS 970
Query: 155 QIYA---------------LPEIPQDQNAAESWETLEADLIELSQLVTDFSLLVNSQQEK 199
IYA L + ++ + TL+ L E ++ + EK
Sbjct: 971 SIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAMEK 1030
Query: 200 IDSIADHVNSAAVNVEEGTKNLGKA 224
++S+ D + E K KA
Sbjct: 1031 LESVRDKFQETSDEFEAARKRAKKA 1055
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 36.2 bits (82), Expect = 0.037
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 16/100 (16%)
Query: 60 RTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATA--EFLQLHLESVEELK 117
R QLR ++EK L+V++ LKR ++ +EEAS A A LQ LE V E
Sbjct: 1888 RVADQLRD---QLEKGNLRVKQ-----LKRQLEEAEEEASRAQAGRRRLQRELEDVTESA 1939
Query: 118 KQFNDEETLLQPPLTR------SMTVGGAFHTTEAEASSQ 151
+ N E T L+ L R + TV F E AS +
Sbjct: 1940 ESMNREVTTLRNRLRRGPLTFTTRTVRQVFRLEEGVASDE 1979
Score = 31.2 bits (69), Expect = 1.2
Identities = 41/167 (24%), Positives = 61/167 (36%), Gaps = 21/167 (12%)
Query: 61 TVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLESVEELKKQF 120
T+ + +R+ EK + +L LKR +D E E Q EEL+ Q
Sbjct: 1060 TIADMEDRLRKEEK-----GRQELEKLKRRLDGESSELQEQMVEQQQ----RAEELRAQL 1110
Query: 121 NDEETLLQPPLTRSMTVGGA--------FHTTEAEASSQSLTQIYALPEIPQDQNAAESW 172
+E LQ L R+ GGA A A +Q + + ++ +
Sbjct: 1111 GRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERVARTKAEKQRRDLG 1170
Query: 173 ETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTK 219
E LEA EL + N+QQE V +EE T+
Sbjct: 1171 EELEALRGELEDTLDS----TNAQQELRSKREQEVTELKKTLEEETR 1213
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 36.2 bits (82), Expect = 0.037
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 16/100 (16%)
Query: 60 RTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATA--EFLQLHLESVEELK 117
R QLR ++EK L+V++ LKR ++ +EEAS A A LQ LE V E
Sbjct: 1880 RVADQLRD---QLEKGNLRVKQ-----LKRQLEEAEEEASRAQAGRRRLQRELEDVTESA 1931
Query: 118 KQFNDEETLLQPPLTR------SMTVGGAFHTTEAEASSQ 151
+ N E T L+ L R + TV F E AS +
Sbjct: 1932 ESMNREVTTLRNRLRRGPLTFTTRTVRQVFRLEEGVASDE 1971
Score = 31.2 bits (69), Expect = 1.2
Identities = 41/167 (24%), Positives = 61/167 (36%), Gaps = 21/167 (12%)
Query: 61 TVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLESVEELKKQF 120
T+ + +R+ EK + +L LKR +D E E Q EEL+ Q
Sbjct: 1052 TIADMEDRLRKEEK-----GRQELEKLKRRLDGESSELQEQMVEQQQ----RAEELRAQL 1102
Query: 121 NDEETLLQPPLTRSMTVGGA--------FHTTEAEASSQSLTQIYALPEIPQDQNAAESW 172
+E LQ L R+ GGA A A +Q + + ++ +
Sbjct: 1103 GRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERVARTKAEKQRRDLG 1162
Query: 173 ETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTK 219
E LEA EL + N+QQE V +EE T+
Sbjct: 1163 EELEALRGELEDTLDS----TNAQQELRSKREQEVTELKKTLEEETR 1205
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 36.2 bits (82), Expect = 0.037
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 16/100 (16%)
Query: 60 RTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATA--EFLQLHLESVEELK 117
R QLR ++EK L+V++ LKR ++ +EEAS A A LQ LE V E
Sbjct: 1921 RVADQLRD---QLEKGNLRVKQ-----LKRQLEEAEEEASRAQAGRRRLQRELEDVTESA 1972
Query: 118 KQFNDEETLLQPPLTR------SMTVGGAFHTTEAEASSQ 151
+ N E T L+ L R + TV F E AS +
Sbjct: 1973 ESMNREVTTLRNRLRRGPLTFTTRTVRQVFRLEEGVASDE 2012
Score = 31.2 bits (69), Expect = 1.2
Identities = 41/167 (24%), Positives = 61/167 (36%), Gaps = 21/167 (12%)
Query: 61 TVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLESVEELKKQF 120
T+ + +R+ EK + +L LKR +D E E Q EEL+ Q
Sbjct: 1093 TIADMEDRLRKEEK-----GRQELEKLKRRLDGESSELQEQMVEQQQ----RAEELRAQL 1143
Query: 121 NDEETLLQPPLTRSMTVGGA--------FHTTEAEASSQSLTQIYALPEIPQDQNAAESW 172
+E LQ L R+ GGA A A +Q + + ++ +
Sbjct: 1144 GRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERVARTKAEKQRRDLG 1203
Query: 173 ETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTK 219
E LEA EL + N+QQE V +EE T+
Sbjct: 1204 EELEALRGELEDTLDS----TNAQQELRSKREQEVTELKKTLEEETR 1246
>gi|112420968 coiled-coil domain containing 158 [Homo sapiens]
Length = 1113
Score = 35.8 bits (81), Expect = 0.048
Identities = 38/210 (18%), Positives = 86/210 (40%), Gaps = 21/210 (10%)
Query: 13 LEPAIQKFIKIVIPTDLERLRKHQINIEKYQRCRIWDK----------LHEEHINAGRTV 62
L+ +QK + DL + R+ ++++EK Q R+WD+ L E N V
Sbjct: 375 LDDQLQKLL-----ADLHK-REKELSLEKEQNKRLWDRDTGNSITIDHLRRELDNRNMEV 428
Query: 63 QQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEAS-----AATAEFLQLHLESVEELK 117
Q+L + ++ ++ C + + ++ + +++ +S +T E L+ +E + K
Sbjct: 429 QRLEALLKALKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKK 488
Query: 118 KQFNDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAESWETLEA 177
E + T A T AE + L E+ +N + ++
Sbjct: 489 MTLESSERTISDLTTSLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQT 548
Query: 178 DLIELSQLVTDFSLLVNSQQEKIDSIADHV 207
+ L +T+ ++ +++I+++ V
Sbjct: 549 ECEALKLQMTEKDKVIEILRQQIENMTQLV 578
>gi|148536871 ninein isoform 1 [Homo sapiens]
Length = 2046
Score = 35.0 bits (79), Expect = 0.081
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Query: 52 HEEHINAGRTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLE 111
H++H+N T+ N E EKL LK D + + + ++ E +HLE
Sbjct: 1888 HQKHLNPSGTM-----NPTEQEKLSLKRECDQFQKEQSPANRKVSQMNSLEQELETIHLE 1942
Query: 112 SVEELKKQFNDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAES 171
+ KKQ +E L++ RS A + A L Q A P +P++Q
Sbjct: 1943 NEGLKKKQVKLDEQLMEMQHLRST----ATPSPSPHAWDLQLLQQQACPMVPREQFLQLQ 1998
Query: 172 WETLEADLI 180
+ L+A+ I
Sbjct: 1999 RQLLQAERI 2007
>gi|51479166 bicaudal D homolog 2 isoform 1 [Homo sapiens]
Length = 855
Score = 35.0 bits (79), Expect = 0.081
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 12 RLEPAIQKFIKIVIPTDLERLR-KHQINIEKYQRCRI---WDKLHEEHINAGRTVQQLRS 67
RL Q+ +I +++R R + I K++ R+ + +L EE+I+ + V LR
Sbjct: 141 RLASVAQELKEINQNVEIQRGRLRDDIKEYKFREARLLQDYSELEEENISLQKQVSVLRQ 200
Query: 68 NIREIEKLCLKVRK--DDLVLLKRMIDPVKEEASAATAEFLQLHLESVEELKKQFNDEET 125
N E E L ++++ ++ L + E + E + LE E K +++
Sbjct: 201 NQVEFEGLKHEIKRLEEETEYLNSQL-----EDAIRLKEISERQLEEALETLKTEREQKN 255
Query: 126 LLQPPLTRSMTVGGAFHTTEAEASSQSL 153
L+ L+ M++ +F+T+ S L
Sbjct: 256 SLRKELSHYMSINDSFYTSHLHVSLDGL 283
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 35.0 bits (79), Expect = 0.081
Identities = 44/221 (19%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 3 EDEEKVKLRRLEPAIQKFIKIVIPTDLERLRKHQINIEKYQRCRIWDKLHEEHINAGRTV 62
E+ +V LR++ + I+ D+ +L H++ K Q + +L + +
Sbjct: 1681 EENLQVVLRQMSKHKTELKNIL---DMLQLENHELQGLKLQHDQRVSELEKTQVAVLEEK 1737
Query: 63 QQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEF--LQLHLESVEELKKQF 120
+L N+++I + +K ++ K++++ K E TAE LQ +E + + K+
Sbjct: 1738 LELE-NLQQISQQ----QKGEIEWQKQLLERDKREIERMTAESRALQSCVECLSKEKEDL 1792
Query: 121 NDEETLLQPPLTRSMTV-GGAFHTTEAEASSQSLTQIYALPEIPQDQNAAESWETLEADL 179
++ + + L ++ V A ++ E S+ ++ + +L D+
Sbjct: 1793 QEKCDIWEKKLAQTKRVLAAAEENSKMEQSNLEKLELNVRKLQQELDQLNRDKLSLHNDI 1852
Query: 180 IELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKN 220
+ Q + + VNS QE++ ++ DH+N A ++ TK+
Sbjct: 1853 SAMQQQLQEKREAVNSLQEELANVQDHLNLAKQDLLHTTKH 1893
>gi|21735417 bicaudal D homolog 2 isoform 2 [Homo sapiens]
Length = 824
Score = 35.0 bits (79), Expect = 0.081
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 12 RLEPAIQKFIKIVIPTDLERLR-KHQINIEKYQRCRI---WDKLHEEHINAGRTVQQLRS 67
RL Q+ +I +++R R + I K++ R+ + +L EE+I+ + V LR
Sbjct: 141 RLASVAQELKEINQNVEIQRGRLRDDIKEYKFREARLLQDYSELEEENISLQKQVSVLRQ 200
Query: 68 NIREIEKLCLKVRK--DDLVLLKRMIDPVKEEASAATAEFLQLHLESVEELKKQFNDEET 125
N E E L ++++ ++ L + E + E + LE E K +++
Sbjct: 201 NQVEFEGLKHEIKRLEEETEYLNSQL-----EDAIRLKEISERQLEEALETLKTEREQKN 255
Query: 126 LLQPPLTRSMTVGGAFHTTEAEASSQSL 153
L+ L+ M++ +F+T+ S L
Sbjct: 256 SLRKELSHYMSINDSFYTSHLHVSLDGL 283
>gi|117414154 sodium channel associated protein 2 isoform b [Homo
sapiens]
Length = 939
Score = 34.7 bits (78), Expect = 0.11
Identities = 47/223 (21%), Positives = 101/223 (45%), Gaps = 38/223 (17%)
Query: 4 DEEKVKLRRLEPAIQK---FIKIVIP--TDLERLRKHQINIEKYQRCRIWDKLHEEHINA 58
D++ +R+L+ +Q+ IK + T++E+ + Q++ + Q + +KL +
Sbjct: 727 DDQTETIRKLKDCLQEKDEHIKRLQEKITEIEKCTQEQLDEKSSQLDEVLEKLERHNERK 786
Query: 59 GRTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLES-VEELK 117
+ QQL+ E+E ++RK L ++ D + L HLE+ V+E+K
Sbjct: 787 EKLKQQLKGKEVELE----EIRKAYSTLNRKWHDKGE----------LLCHLETQVKEVK 832
Query: 118 KQFNDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAESWETLEA 177
++F ++E L+ +S+ E ++ +++++ + + Q A +EA
Sbjct: 833 EKFENKEKKLKAERDKSI-----------ELQKNAMEKLHSMDDAFKRQVDA----IVEA 877
Query: 178 DLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKN 220
E++QL + ++S K+ I + +EE KN
Sbjct: 878 HQAEIAQLANEKQKCIDSANLKVHQIEKEMREL---LEETCKN 917
>gi|117414162 sodium channel associated protein 2 isoform a [Homo
sapiens]
Length = 1032
Score = 34.7 bits (78), Expect = 0.11
Identities = 47/223 (21%), Positives = 101/223 (45%), Gaps = 38/223 (17%)
Query: 4 DEEKVKLRRLEPAIQK---FIKIVIP--TDLERLRKHQINIEKYQRCRIWDKLHEEHINA 58
D++ +R+L+ +Q+ IK + T++E+ + Q++ + Q + +KL +
Sbjct: 820 DDQTETIRKLKDCLQEKDEHIKRLQEKITEIEKCTQEQLDEKSSQLDEVLEKLERHNERK 879
Query: 59 GRTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLES-VEELK 117
+ QQL+ E+E ++RK L ++ D + L HLE+ V+E+K
Sbjct: 880 EKLKQQLKGKEVELE----EIRKAYSTLNRKWHDKGE----------LLCHLETQVKEVK 925
Query: 118 KQFNDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAESWETLEA 177
++F ++E L+ +S+ E ++ +++++ + + Q A +EA
Sbjct: 926 EKFENKEKKLKAERDKSI-----------ELQKNAMEKLHSMDDAFKRQVDA----IVEA 970
Query: 178 DLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKN 220
E++QL + ++S K+ I + +EE KN
Sbjct: 971 HQAEIAQLANEKQKCIDSANLKVHQIEKEMREL---LEETCKN 1010
>gi|171184451 centrosome-associated protein 350 [Homo sapiens]
Length = 3117
Score = 34.7 bits (78), Expect = 0.11
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 25/192 (13%)
Query: 39 IEKYQRCRIWDKLHEEHINAGRTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEA 98
I+ +Q C W +E ++ T + S+ +IE ++ KD+L K +++ +K+E
Sbjct: 2022 IKSHQHCYSWS---DESLSM--TQSETTSDQSDIEGR-IRALKDELRKRKSVVNQLKKEQ 2075
Query: 99 SAATAEFLQLHLESVEELKKQFNDEETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYA 158
E L+ S L KQ + ++ TEAE S T A
Sbjct: 2076 KKRQKERLKAQEAS---LIKQLESYDEFIKK--------------TEAELSQDLETSPTA 2118
Query: 159 LPEIPQDQNAAESWETLEADLIELSQLVTDFSLLVNSQQEK--IDSIADHVNSAAVNVEE 216
P+I +A+E + + S+ ++ L S++ + ++SIA+HV+++ E
Sbjct: 2119 KPQIKTLSSASEKPKIKPLTPLHRSETAKNWKSLTESERSRGSLESIAEHVDASLSGSER 2178
Query: 217 GTKNLGKAAKYK 228
+A K
Sbjct: 2179 SVSERSLSAYAK 2190
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 34.3 bits (77), Expect = 0.14
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 51 LHEEHINAGRTVQQLRSNIR-EIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLH 109
L E++ A + +L+ ++ ++ + +D + RMID + ++ S E QL+
Sbjct: 600 LFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELNKQVS----ELSQLY 655
Query: 110 LESVEEL-----KKQFND--EETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIY-ALPE 161
E+ EL +K D E + + + M + +A S+ +Q L E
Sbjct: 656 KEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNE 715
Query: 162 IPQDQNAAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNL 221
+ Q + ++ + + E Q++T +EKI ++ +H+ S V V + K L
Sbjct: 716 LTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQL 775
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 34.3 bits (77), Expect = 0.14
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 51 LHEEHINAGRTVQQLRSNIR-EIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLH 109
L E++ A + +L+ ++ ++ + +D + RMID + ++ S E QL+
Sbjct: 589 LFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELNKQVS----ELSQLY 644
Query: 110 LESVEEL-----KKQFND--EETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIY-ALPE 161
E+ EL +K D E + + + M + +A S+ +Q L E
Sbjct: 645 KEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNE 704
Query: 162 IPQDQNAAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNL 221
+ Q + ++ + + E Q++T +EKI ++ +H+ S V V + K L
Sbjct: 705 LTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQL 764
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 34.3 bits (77), Expect = 0.14
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 51 LHEEHINAGRTVQQLRSNIR-EIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLH 109
L E++ A + +L+ ++ ++ + +D + RMID + ++ S E QL+
Sbjct: 568 LFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELNKQVS----ELSQLY 623
Query: 110 LESVEEL-----KKQFND--EETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIY-ALPE 161
E+ EL +K D E + + + M + +A S+ +Q L E
Sbjct: 624 KEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNE 683
Query: 162 IPQDQNAAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNL 221
+ Q + ++ + + E Q++T +EKI ++ +H+ S V V + K L
Sbjct: 684 LTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQL 743
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 34.3 bits (77), Expect = 0.14
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 51 LHEEHINAGRTVQQLRSNIR-EIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLH 109
L E++ A + +L+ ++ ++ + +D + RMID + ++ S E QL+
Sbjct: 597 LFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELNKQVS----ELSQLY 652
Query: 110 LESVEEL-----KKQFND--EETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIY-ALPE 161
E+ EL +K D E + + + M + +A S+ +Q L E
Sbjct: 653 KEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNE 712
Query: 162 IPQDQNAAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNL 221
+ Q + ++ + + E Q++T +EKI ++ +H+ S V V + K L
Sbjct: 713 LTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQL 772
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 34.3 bits (77), Expect = 0.14
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 51 LHEEHINAGRTVQQLRSNIR-EIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLH 109
L E++ A + +L+ ++ ++ + +D + RMID + ++ S E QL+
Sbjct: 597 LFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELNKQVS----ELSQLY 652
Query: 110 LESVEEL-----KKQFND--EETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIY-ALPE 161
E+ EL +K D E + + + M + +A S+ +Q L E
Sbjct: 653 KEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNE 712
Query: 162 IPQDQNAAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNL 221
+ Q + ++ + + E Q++T +EKI ++ +H+ S V V + K L
Sbjct: 713 LTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQL 772
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 34.3 bits (77), Expect = 0.14
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 51 LHEEHINAGRTVQQLRSNIR-EIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLH 109
L E++ A + +L+ ++ ++ + +D + RMID + ++ S E QL+
Sbjct: 597 LFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELNKQVS----ELSQLY 652
Query: 110 LESVEEL-----KKQFND--EETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIY-ALPE 161
E+ EL +K D E + + + M + +A S+ +Q L E
Sbjct: 653 KEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNE 712
Query: 162 IPQDQNAAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNL 221
+ Q + ++ + + E Q++T +EKI ++ +H+ S V V + K L
Sbjct: 713 LTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQL 772
>gi|8394376 syntaxin 18 [Homo sapiens]
Length = 335
Score = 34.3 bits (77), Expect = 0.14
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 175 LEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAK 226
+E ++E+S+L F+ V Q+ +IDSI V A N++EG +++ +A K
Sbjct: 256 IEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIK 307
>gi|49258196 syntaxin 19 [Homo sapiens]
Length = 294
Score = 34.3 bits (77), Expect = 0.14
Identities = 21/54 (38%), Positives = 26/54 (48%)
Query: 175 LEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKYK 228
LE + +L L SLLV Q E I++I VNS V + G A KYK
Sbjct: 222 LENQIKDLRDLFIQISLLVEEQGESINNIEMTVNSTKEYVNNTKEKFGLAVKYK 275
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,604,350
Number of Sequences: 37866
Number of extensions: 436394
Number of successful extensions: 1531
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 1469
Number of HSP's gapped (non-prelim): 152
length of query: 302
length of database: 18,247,518
effective HSP length: 102
effective length of query: 200
effective length of database: 14,385,186
effective search space: 2877037200
effective search space used: 2877037200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.