Search of human proteins with 156631005

Search of human proteins with 156631005

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156631005 proteasome 26S non-ATPase subunit 8 [Homo sapiens]
         (350 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156631005 proteasome 26S non-ATPase subunit 8 [Homo sapiens]       696   0.0  
gi|239745993 PREDICTED: hypothetical protein LOC441806 [Homo sap...   148   6e-36
gi|169212891 PREDICTED: similar to hCG1644617 [Homo sapiens]          146   3e-35
gi|239751495 PREDICTED: similar to hCG1644617 [Homo sapiens]          146   3e-35
gi|4885455 SH2B adaptor protein 3 [Homo sapiens]                       33   0.29 
gi|47578097 UCH interacting protein 1 isoform b [Homo sapiens]         32   1.1  
gi|66346717 UCH interacting protein 1 isoform a [Homo sapiens]         32   1.1  
gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens]      32   1.1  
gi|157738629 kinesin family member 13A isoform d [Homo sapiens]        31   1.9  
gi|157738627 kinesin family member 13A isoform c [Homo sapiens]        31   1.9  
gi|157738625 kinesin family member 13A isoform b [Homo sapiens]        31   1.9  
gi|157738621 kinesin family member 13A isoform a [Homo sapiens]        31   1.9  
gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]            30   2.5  
gi|113417039 PREDICTED: hypothetical protein [Homo sapiens]            30   2.5  
gi|113416520 PREDICTED: hypothetical protein [Homo sapiens]            30   2.5  
gi|29337296 melanoma antigen family D, 4B isoform 2 [Homo sapiens]     30   2.5  
gi|29337294 melanoma antigen family D, 4B isoform 1 [Homo sapiens]     30   2.5  
gi|29337292 melanoma antigen family D, 4B isoform 1 [Homo sapiens]     30   2.5  
gi|62241026 doublesex and mab-3 related transcription factor 1 [...    30   2.5  
gi|149274614 melanoma antigen family D, 4 [Homo sapiens]               30   2.5  
gi|12056463 coagulation factor VIII-associated protein [Homo sap...    30   3.2  
gi|56090586 coagulation factor VIII-associated (intronic transcr...    30   3.2  
gi|56090588 coagulation factor VIII-associated (intronic transcr...    30   3.2  
gi|197313654 TBCC domain containing 1 [Homo sapiens]                   30   4.2  
gi|8922517 TBCC domain containing 1 [Homo sapiens]                     30   4.2  
gi|239757091 PREDICTED: hypothetical protein [Homo sapiens]            29   5.5  
gi|239751597 PREDICTED: hypothetical protein XP_002347925 [Homo ...    29   5.5  
gi|169210434 PREDICTED: hypothetical protein [Homo sapiens]            29   5.5  
gi|239746112 PREDICTED: hypothetical protein XP_002344192 [Homo ...    29   5.5  
gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]            28   9.4  

>gi|156631005 proteasome 26S non-ATPase subunit 8 [Homo sapiens]
          Length = 350

 Score =  696 bits (1797), Expect = 0.0
 Identities = 350/350 (100%), Positives = 350/350 (100%)

Query: 1   MFIKGRAPRAPPRERRRATRGGLRQVVAPPRALGSTSRPHFRRASVCRRRCRKSGGLLAA 60
           MFIKGRAPRAPPRERRRATRGGLRQVVAPPRALGSTSRPHFRRASVCRRRCRKSGGLLAA
Sbjct: 1   MFIKGRAPRAPPRERRRATRGGLRQVVAPPRALGSTSRPHFRRASVCRRRCRKSGGLLAA 60

Query: 61  SRKMAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNRKSPNLSKCGEELGRLK 120
           SRKMAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNRKSPNLSKCGEELGRLK
Sbjct: 61  SRKMAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNRKSPNLSKCGEELGRLK 120

Query: 121 LVLLELNFLPTTGTKLTKQQLILARDILEIGAQWSILRKDIPSFERYMAQLKCYYFDYKE 180
           LVLLELNFLPTTGTKLTKQQLILARDILEIGAQWSILRKDIPSFERYMAQLKCYYFDYKE
Sbjct: 121 LVLLELNFLPTTGTKLTKQQLILARDILEIGAQWSILRKDIPSFERYMAQLKCYYFDYKE 180

Query: 181 QLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGS 240
           QLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGS
Sbjct: 181 QLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGS 240

Query: 241 YNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMT 300
           YNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMT
Sbjct: 241 YNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMT 300

Query: 301 DYAKKRGWVLGPNNYYSFASQQQKPEDTTIPSTELAKQVIEYARQLEMIV 350
           DYAKKRGWVLGPNNYYSFASQQQKPEDTTIPSTELAKQVIEYARQLEMIV
Sbjct: 301 DYAKKRGWVLGPNNYYSFASQQQKPEDTTIPSTELAKQVIEYARQLEMIV 350


>gi|239745993 PREDICTED: hypothetical protein LOC441806 [Homo
           sapiens]
          Length = 95

 Score =  148 bits (374), Expect = 6e-36
 Identities = 77/95 (81%), Positives = 81/95 (85%), Gaps = 1/95 (1%)

Query: 211 ELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDE 270
           ELE LPA D QTN YIK PVSLE YLMEG YNKVFLAKGNIPA+SYT FI ILLDTIRDE
Sbjct: 2   ELEWLPATDTQTNAYIKRPVSLEPYLMEGGYNKVFLAKGNIPAKSYT-FIHILLDTIRDE 60

Query: 271 IAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKK 305
           +AGCIEKAYEKILFT+AT ILF NTPK+M D  KK
Sbjct: 61  MAGCIEKAYEKILFTKATWILFLNTPKQMMDNTKK 95


>gi|169212891 PREDICTED: similar to hCG1644617 [Homo sapiens]
          Length = 95

 Score =  146 bits (368), Expect = 3e-35
 Identities = 76/95 (80%), Positives = 80/95 (84%), Gaps = 1/95 (1%)

Query: 211 ELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDE 270
           ELE LPA D QTN YIK PVSLE YL EG YNKVFLAKGNIPA+SYT FI ILLDTIRDE
Sbjct: 2   ELEWLPATDTQTNAYIKRPVSLEPYLKEGGYNKVFLAKGNIPAKSYT-FIHILLDTIRDE 60

Query: 271 IAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKK 305
           +AGCIEKAYEKILFT+AT ILF NTPK+M D  KK
Sbjct: 61  MAGCIEKAYEKILFTKATWILFLNTPKQMMDNTKK 95


>gi|239751495 PREDICTED: similar to hCG1644617 [Homo sapiens]
          Length = 95

 Score =  146 bits (368), Expect = 3e-35
 Identities = 76/95 (80%), Positives = 80/95 (84%), Gaps = 1/95 (1%)

Query: 211 ELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDE 270
           ELE LPA D QTN YIK PVSLE YL EG YNKVFLAKGNIPA+SYT FI ILLDTIRDE
Sbjct: 2   ELEWLPATDTQTNAYIKRPVSLEPYLKEGGYNKVFLAKGNIPAKSYT-FIHILLDTIRDE 60

Query: 271 IAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKK 305
           +AGCIEKAYEKILFT+AT ILF NTPK+M D  KK
Sbjct: 61  MAGCIEKAYEKILFTKATWILFLNTPKQMMDNTKK 95


>gi|4885455 SH2B adaptor protein 3 [Homo sapiens]
          Length = 575

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 10/78 (12%)

Query: 5   GRAPRAPPRERRRATRGGLRQVVAPPRALGSTSRPHFRRA--SVCRRRCRKSGGLLAASR 62
           G  P AP   + R++     + +APPR  G  S  HFRR+   + RRR   S G L A+ 
Sbjct: 107 GPGPAAPGLPKARSS-----EELAPPRPPGPCSFQHFRRSLRHIFRRR---SAGELPAAH 158

Query: 63  KMAAAAVNGAAGFSSSGP 80
             AA    G A  + + P
Sbjct: 159 TAAAPGTPGEAAETPARP 176


>gi|47578097 UCH interacting protein 1 isoform b [Homo sapiens]
          Length = 427

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 21/57 (36%), Positives = 27/57 (47%)

Query: 218 KDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGC 274
           K + T V I+    L   LM  + +   L KG   A+    F+D LLDTIR    GC
Sbjct: 98  KGVPTEVKIQEMTKLGHELMLCAPDDQELLKGCACAQKQLHFMDQLLDTIRSLTIGC 154


>gi|66346717 UCH interacting protein 1 isoform a [Homo sapiens]
          Length = 368

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 21/57 (36%), Positives = 27/57 (47%)

Query: 218 KDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGC 274
           K + T V I+    L   LM  + +   L KG   A+    F+D LLDTIR    GC
Sbjct: 98  KGVPTEVKIQEMTKLGHELMLCAPDDQELLKGCACAQKQLHFMDQLLDTIRSLTIGC 154


>gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens]
          Length = 757

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 89  QAATGMYEQLKGEWNRKSPNLSKCGEELGRLKLVLLELNF---LPTTGTKLTKQQLILAR 145
           QA   +YE+L+ E +      ++   E    + VL    +   +PTT  +  KQ + LAR
Sbjct: 524 QARLDIYEKLEKELDEIIMQTAEIENE-DEAERVLFSYGYGANVPTTAKRRLKQSVHLAR 582

Query: 146 DILEIGAQWSILRKDIPSFERYMAQL 171
            +L++  Q S++ KD+   +  + QL
Sbjct: 583 RVLQLEKQNSLILKDLEHRKDQVTQL 608


>gi|157738629 kinesin family member 13A isoform d [Homo sapiens]
          Length = 1749

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 22/133 (16%)

Query: 77  SSGP--AATSGAVLQAATGMYEQLKGEWNRKSPNLSKCGEELGRLKLVLLELNFLPTTGT 134
           SSGP   A S    Q     + + + E  R+S  L+K  E+L +   ++ E NFL    +
Sbjct: 643 SSGPDRLAYSSQTAQQKVTQWAEERDELFRQS--LAKLREQLVKANTLVREANFLAEEMS 700

Query: 135 KLTKQQLILARDILEIGAQ-----------WSILRK-------DIPSFERYMAQLKCYYF 176
           KLT  Q+ L      + A              + RK        I   E  +  ++  Y 
Sbjct: 701 KLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLIDMRDLYQ 760

Query: 177 DYKEQLPESAYMH 189
           ++KE++PE+  ++
Sbjct: 761 EWKEKVPEAKRLY 773


>gi|157738627 kinesin family member 13A isoform c [Homo sapiens]
          Length = 1757

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 22/133 (16%)

Query: 77  SSGP--AATSGAVLQAATGMYEQLKGEWNRKSPNLSKCGEELGRLKLVLLELNFLPTTGT 134
           SSGP   A S    Q     + + + E  R+S  L+K  E+L +   ++ E NFL    +
Sbjct: 643 SSGPDRLAYSSQTAQQKVTQWAEERDELFRQS--LAKLREQLVKANTLVREANFLAEEMS 700

Query: 135 KLTKQQLILARDILEIGAQ-----------WSILRK-------DIPSFERYMAQLKCYYF 176
           KLT  Q+ L      + A              + RK        I   E  +  ++  Y 
Sbjct: 701 KLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLIDMRDLYQ 760

Query: 177 DYKEQLPESAYMH 189
           ++KE++PE+  ++
Sbjct: 761 EWKEKVPEAKRLY 773


>gi|157738625 kinesin family member 13A isoform b [Homo sapiens]
          Length = 1770

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 22/133 (16%)

Query: 77  SSGP--AATSGAVLQAATGMYEQLKGEWNRKSPNLSKCGEELGRLKLVLLELNFLPTTGT 134
           SSGP   A S    Q     + + + E  R+S  L+K  E+L +   ++ E NFL    +
Sbjct: 643 SSGPDRLAYSSQTAQQKVTQWAEERDELFRQS--LAKLREQLVKANTLVREANFLAEEMS 700

Query: 135 KLTKQQLILARDILEIGAQ-----------WSILRK-------DIPSFERYMAQLKCYYF 176
           KLT  Q+ L      + A              + RK        I   E  +  ++  Y 
Sbjct: 701 KLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLIDMRDLYQ 760

Query: 177 DYKEQLPESAYMH 189
           ++KE++PE+  ++
Sbjct: 761 EWKEKVPEAKRLY 773


>gi|157738621 kinesin family member 13A isoform a [Homo sapiens]
          Length = 1805

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 22/133 (16%)

Query: 77  SSGP--AATSGAVLQAATGMYEQLKGEWNRKSPNLSKCGEELGRLKLVLLELNFLPTTGT 134
           SSGP   A S    Q     + + + E  R+S  L+K  E+L +   ++ E NFL    +
Sbjct: 643 SSGPDRLAYSSQTAQQKVTQWAEERDELFRQS--LAKLREQLVKANTLVREANFLAEEMS 700

Query: 135 KLTKQQLILARDILEIGAQ-----------WSILRK-------DIPSFERYMAQLKCYYF 176
           KLT  Q+ L      + A              + RK        I   E  +  ++  Y 
Sbjct: 701 KLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLIDMRDLYQ 760

Query: 177 DYKEQLPESAYMH 189
           ++KE++PE+  ++
Sbjct: 761 EWKEKVPEAKRLY 773


>gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 34/109 (31%), Positives = 43/109 (39%), Gaps = 14/109 (12%)

Query: 6   RAPRAPPR--ERRRATRGGLR-QVVAPPRALGSTSRPHFRRASVCR-----RRCR--KSG 55
           R    PPR  +R+ A+R G     V  PRA GSTSR     A   R     R CR     
Sbjct: 16  RPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGR 75

Query: 56  GLLAASRKMAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNR 104
           G  +A+     +   G       G A+  G   +A TG     K +W R
Sbjct: 76  GYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGE----KRKWER 120


>gi|113417039 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 34/109 (31%), Positives = 43/109 (39%), Gaps = 14/109 (12%)

Query: 6   RAPRAPPR--ERRRATRGGLR-QVVAPPRALGSTSRPHFRRASVCR-----RRCR--KSG 55
           R    PPR  +R+ A+R G     V  PRA GSTSR     A   R     R CR     
Sbjct: 16  RPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGR 75

Query: 56  GLLAASRKMAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNR 104
           G  +A+     +   G       G A+  G   +A TG     K +W R
Sbjct: 76  GYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGE----KRKWER 120


>gi|113416520 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 34/109 (31%), Positives = 43/109 (39%), Gaps = 14/109 (12%)

Query: 6   RAPRAPPR--ERRRATRGGLR-QVVAPPRALGSTSRPHFRRASVCR-----RRCR--KSG 55
           R    PPR  +R+ A+R G     V  PRA GSTSR     A   R     R CR     
Sbjct: 16  RPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGR 75

Query: 56  GLLAASRKMAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNR 104
           G  +A+     +   G       G A+  G   +A TG     K +W R
Sbjct: 76  GYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGE----KRKWER 120


>gi|29337296 melanoma antigen family D, 4B isoform 2 [Homo sapiens]
          Length = 739

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 13/108 (12%)

Query: 8   PRAPPRERRRATRGGLRQVVAPPRALGSTSRPHFRRASVCRRRCRKSGGLLAASR----- 62
           P+ P   +  AT G       P  A G       R  +  R +  KSG  LA +R     
Sbjct: 252 PKRPAPAQEAATEG-------PSAASGVPQTGPGREVAATRPKTTKSGKALAKTRWVEPQ 304

Query: 63  -KMAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNRKSPNL 109
             +AAAA       S   P   + A  Q +   + ++ G+  +KS +L
Sbjct: 305 NVVAAAAAKAKMATSIPEPEGAAAATAQHSAEPWARMGGKRTKKSKHL 352


>gi|29337294 melanoma antigen family D, 4B isoform 1 [Homo sapiens]
          Length = 741

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 13/108 (12%)

Query: 8   PRAPPRERRRATRGGLRQVVAPPRALGSTSRPHFRRASVCRRRCRKSGGLLAASR----- 62
           P+ P   +  AT G       P  A G       R  +  R +  KSG  LA +R     
Sbjct: 252 PKRPAPAQEAATEG-------PSAASGVPQTGPGREVAATRPKTTKSGKALAKTRWVEPQ 304

Query: 63  -KMAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNRKSPNL 109
             +AAAA       S   P   + A  Q +   + ++ G+  +KS +L
Sbjct: 305 NVVAAAAAKAKMATSIPEPEGAAAATAQHSAEPWARMGGKRTKKSKHL 352


>gi|29337292 melanoma antigen family D, 4B isoform 1 [Homo sapiens]
          Length = 741

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 13/108 (12%)

Query: 8   PRAPPRERRRATRGGLRQVVAPPRALGSTSRPHFRRASVCRRRCRKSGGLLAASR----- 62
           P+ P   +  AT G       P  A G       R  +  R +  KSG  LA +R     
Sbjct: 252 PKRPAPAQEAATEG-------PSAASGVPQTGPGREVAATRPKTTKSGKALAKTRWVEPQ 304

Query: 63  -KMAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNRKSPNL 109
             +AAAA       S   P   + A  Q +   + ++ G+  +KS +L
Sbjct: 305 NVVAAAAAKAKMATSIPEPEGAAAATAQHSAEPWARMGGKRTKKSKHL 352


>gi|62241026 doublesex and mab-3 related transcription factor 1
           [Homo sapiens]
          Length = 373

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 10/60 (16%)

Query: 53  KSGGLLAASRKMAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNRKSPNLSKC 112
           ++GG   AS  +  AA   +AG SS G  + SGA             G  ++KSP L KC
Sbjct: 27  RAGGFGKASGALVGAASGSSAGGSSRGGGSGSGA----------SDLGAGSKKSPRLPKC 76


>gi|149274614 melanoma antigen family D, 4 [Homo sapiens]
          Length = 739

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 13/108 (12%)

Query: 8   PRAPPRERRRATRGGLRQVVAPPRALGSTSRPHFRRASVCRRRCRKSGGLLAASR----- 62
           P+ P   +  AT G       P  A G       R  +  R +  KSG  LA +R     
Sbjct: 252 PKRPAPAQEAATEG-------PSAASGVPQTGPGREVAATRPKTTKSGKALAKTRWVEPQ 304

Query: 63  -KMAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNRKSPNL 109
             +AAAA       S   P   + A  Q +   + ++ G+  +KS +L
Sbjct: 305 NVVAAAAAKAKMATSIPEPEGAAAATAQHSAEPWARMGGKRTKKSKHL 352


>gi|12056463 coagulation factor VIII-associated protein [Homo
           sapiens]
          Length = 371

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 64  MAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNRKSPNLSKCGEELGRLKLVL 123
           MAAAA     G +  GP A  G  L     +  +LK  + RK PN+++ GE+ G+L   L
Sbjct: 1   MAAAAAGLGGGGAGPGPEA--GDFLARYRLVSNKLKKRFLRK-PNVAEAGEQFGQLGREL 57

Query: 124 LELNFLP 130
                LP
Sbjct: 58  RAQECLP 64


>gi|56090586 coagulation factor VIII-associated (intronic
           transcript) 3 [Homo sapiens]
          Length = 371

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 64  MAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNRKSPNLSKCGEELGRLKLVL 123
           MAAAA     G +  GP A  G  L     +  +LK  + RK PN+++ GE+ G+L   L
Sbjct: 1   MAAAAAGLGGGGAGPGPEA--GDFLARYRLVSNKLKKRFLRK-PNVAEAGEQFGQLGREL 57

Query: 124 LELNFLP 130
                LP
Sbjct: 58  RAQECLP 64


>gi|56090588 coagulation factor VIII-associated (intronic
           transcript) 2 [Homo sapiens]
          Length = 371

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 64  MAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNRKSPNLSKCGEELGRLKLVL 123
           MAAAA     G +  GP A  G  L     +  +LK  + RK PN+++ GE+ G+L   L
Sbjct: 1   MAAAAAGLGGGGAGPGPEA--GDFLARYRLVSNKLKKRFLRK-PNVAEAGEQFGQLGREL 57

Query: 124 LELNFLP 130
                LP
Sbjct: 58  RAQECLP 64


>gi|197313654 TBCC domain containing 1 [Homo sapiens]
          Length = 557

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 252 PAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKK---MTDYAKKRGW 308
           P E Y F I   ++    EI G +   Y+K L     +I  +    K   +T   +K+  
Sbjct: 463 PCEFYVFIIPFEMEGDTTEIPGGLPSVYQKALGQREQKIQIWQKTVKEAHLTKDQRKQFQ 522

Query: 309 VLGPNNYYSFA--SQQQKPEDTTIPSTELAKQ 338
           VL  N +Y +   +  ++  D+ +P    +KQ
Sbjct: 523 VLVENKFYEWLINTGHRQQLDSLVPPAAGSKQ 554


>gi|8922517 TBCC domain containing 1 [Homo sapiens]
          Length = 557

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 252 PAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKK---MTDYAKKRGW 308
           P E Y F I   ++    EI G +   Y+K L     +I  +    K   +T   +K+  
Sbjct: 463 PCEFYVFIIPFEMEGDTTEIPGGLPSVYQKALGQREQKIQIWQKTVKEAHLTKDQRKQFQ 522

Query: 309 VLGPNNYYSFA--SQQQKPEDTTIPSTELAKQ 338
           VL  N +Y +   +  ++  D+ +P    +KQ
Sbjct: 523 VLVENKFYEWLINTGHRQQLDSLVPPAAGSKQ 554


>gi|239757091 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 194

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 16/84 (19%)

Query: 28  APPRALGSTSRPHFRRASVCRRRCRKSGGLLAASRKMAAAAVNGAAGFSSSGPAATSGAV 87
           APP A  STSR H R A        + GGL    R + A  + G AG  S GP A S   
Sbjct: 57  APPGAAKSTSRVHCRAA--------EGGGL----RPVPAVPLPGPAG-RSGGPGAWSA-- 101

Query: 88  LQAATGMYEQLKGEWNRKSPNLSK 111
            Q   G      G   RK+  L++
Sbjct: 102 -QKHGGHLSGRAGGTGRKTEGLAR 124


>gi|239751597 PREDICTED: hypothetical protein XP_002347925 [Homo
           sapiens]
          Length = 194

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 16/84 (19%)

Query: 28  APPRALGSTSRPHFRRASVCRRRCRKSGGLLAASRKMAAAAVNGAAGFSSSGPAATSGAV 87
           APP A  STSR H R A        + GGL    R + A  + G AG  S GP A S   
Sbjct: 57  APPGAAKSTSRVHCRAA--------EGGGL----RPVPAVPLPGPAG-RSGGPGAWSA-- 101

Query: 88  LQAATGMYEQLKGEWNRKSPNLSK 111
            Q   G      G   RK+  L++
Sbjct: 102 -QKHGGHLSGRAGGTGRKTEGLAR 124


>gi|169210434 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 301

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 29  PPRALGSTSRPHFRRASVCRRRCRKSGGLLAASRKMA--AAAVNGAAGFSSSGPAATSG- 85
           P RA G   RP  R  S   +R R++G   A +R  A  A   +G    + +   A  G 
Sbjct: 36  PSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKGR 95

Query: 86  ----AVLQAATGMYEQLKGEWNRKSP 107
                V+QA T   +  KGE  R+ P
Sbjct: 96  GAGKLVIQARTRAQKGGKGEETRRGP 121


>gi|239746112 PREDICTED: hypothetical protein XP_002344192 [Homo
           sapiens]
          Length = 194

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 16/84 (19%)

Query: 28  APPRALGSTSRPHFRRASVCRRRCRKSGGLLAASRKMAAAAVNGAAGFSSSGPAATSGAV 87
           APP A  STSR H R A        + GGL    R + A  + G AG  S GP A S   
Sbjct: 57  APPGAAKSTSRVHCRAA--------EGGGL----RPVPAVPLPGPAG-RSGGPGAWSA-- 101

Query: 88  LQAATGMYEQLKGEWNRKSPNLSK 111
            Q   G      G   RK+  L++
Sbjct: 102 -QKHGGHLSGRAGGTGRKTEGLAR 124


>gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 707

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 10  APPRERRRATRGGLRQVVAPPRALGSTSRPHFRRASVCRRR--CRKSGG 56
           APP  R    RG L + +AP R+ GS  +P   R+   RR   C   GG
Sbjct: 58  APPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGG 106


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,020,717
Number of Sequences: 37866
Number of extensions: 560292
Number of successful extensions: 1879
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1857
Number of HSP's gapped (non-prelim): 39
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.