GRIN1 659

Name: GRIN1	Sequence: fasta or formatted (901aa)		NCBI GI: 11038635
Description: NMDA receptor 1 isoform NR1-2 precursor		Referenced in: Glutamate
Other entries for this name: alt prot [938aa] NMDA receptor 1 isoform NR1-3 precursor alt prot [885aa] NMDA receptor 1 isoform NR1-1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 68 3 C cysteine 1.3 12 2 D aspartate 4.2 38 2 E glutamate 6.4 58 5 F phenylalanine 4.3 39 2 G glycine 6.5 59 3 H histidine 2.4 22 1 I isoleucine 5.8 52 2 K lysine 5.3 48 2 L leucine 9.0 81 2 M methionine 3.2 29 2 N asparagine 4.9 44 2 P proline 4.1 37 2 Q glutamine 3.8 34 1 R arginine 6.1 55 2 S serine 7.4 67 2 T threonine 5.5 50 2 V valine 7.4 67 2 W tryptophan 1.7 15 1 Y tyrosine 2.9 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NMDA receptor 1 isoform NR1-2 precursor GRIN1 0.989 NMDA receptor 1 isoform NR1-3 precursor GRIN1 0.958 NMDA receptor 1 isoform NR1-1 precursor GRIN2B 0.161 N-methyl-D-aspartate receptor subunit 2B precursor ... GRIN2A 0.153 N-methyl-D-aspartate receptor subunit 2A isoform 2 ... GRIN2A 0.153 N-methyl-D-aspartate receptor subunit 2A isoform 1 ... GRIN2A 0.153 N-methyl-D-aspartate receptor subunit 2A isoform 1 pr... GRIN2C 0.137 N-methyl-D-aspartate receptor subunit 2C precursor [... GRIN2D 0.134 N-methyl-D-aspartate receptor subunit 2D precursor ... GRIK1 0.132 glutamate receptor, ionotropic, kainate 1 isoform 2 ... GRIK2 0.130 glutamate receptor, ionotropic, kainate 2 isoform 1 ... GRIK1 0.129 glutamate receptor, ionotropic, kainate 1 isoform 1 p... GRIK2 0.128 glutamate receptor, ionotropic, kainate 2 isoform 2 ... GRIN3A 0.127 glutamate receptor, ionotropic, N-methyl-D-aspartat... GRIA1 0.123 glutamate receptor, ionotropic, AMPA 1 isoform 1 [H... GRIK3 0.123 glutamate receptor, ionotropic, kainate 3 precursor ... GRIA1 0.123 glutamate receptor, ionotropic, AMPA 1 isoform 2 [H... GRIN3B 0.121 glutamate receptor, ionotropic, N-methyl-D-aspartate... GRIK5 0.121 glutamate receptor KA2 precursor GRIK4 0.120 glutamate receptor KA1 precursor GRIA2 0.118 glutamate receptor, ionotropic, AMPA 2 isoform 2 pr... GRIA2 0.118 glutamate receptor, ionotropic, AMPA 2 isoform 3 [H... GRIA2 0.118 glutamate receptor, ionotropic, AMPA 2 isoform 1 pre... GRIA3 0.111 glutamate receptor, ionotrophic, AMPA 3 isoform 2 p... GRIA3 0.111 glutamate receptor, ionotrophic, AMPA 3 isoform 1 p... GRIA4 0.109 glutamate receptor, ionotrophic, AMPA 4 isoform 1 p... GRIA4 0.108 glutamate receptor, ionotrophic, AMPA 4 isoform 2 p... GRID1 0.099 glutamate receptor, ionotropic, delta 1 precursor [H... GRID2 0.097 glutamate receptor, ionotropic, delta 2 CASR 0.020 calcium-sensing receptor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.