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Search of human proteins with 156151413
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156151413 MUS81 endonuclease homolog [Homo sapiens]
(551 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156151413 MUS81 endonuclease homolog [Homo sapiens] 1112 0.0
gi|22748969 essential meiotic endonuclease 1 homolog 1 [Homo sap... 50 7e-06
gi|58197552 essential meiotic endonuclease 1 homolog 2 [Homo sap... 38 0.028
gi|239753043 PREDICTED: hypothetical protein [Homo sapiens] 33 0.52
gi|75750484 cardiomyopathy associated 4 isoform 2 [Homo sapiens] 33 0.89
gi|27477061 cardiomyopathy associated 4 isoform 1 [Homo sapiens] 33 0.89
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma... 32 1.2
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma... 32 1.2
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma... 32 1.2
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 32 1.2
gi|122937345 myosin VB [Homo sapiens] 32 2.0
gi|31543392 peroxisome proliferator-activated receptor gamma, co... 32 2.0
gi|5031805 insulin receptor substrate 1 [Homo sapiens] 31 2.6
gi|169172508 PREDICTED: hypothetical protein [Homo sapiens] 31 2.6
gi|169173078 PREDICTED: hypothetical protein [Homo sapiens] 31 2.6
gi|66529407 tensin [Homo sapiens] 31 2.6
gi|156151396 heterogeneous nuclear ribonucleoprotein R isoform 3... 31 2.6
gi|156151394 heterogeneous nuclear ribonucleoprotein R isoform 1... 31 2.6
gi|156151392 heterogeneous nuclear ribonucleoprotein R isoform 4... 31 2.6
gi|5031755 heterogeneous nuclear ribonucleoprotein R isoform 2 [... 31 2.6
gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo sapi... 31 3.4
gi|239747741 PREDICTED: hypothetical protein XP_002348258 [Homo ... 31 3.4
gi|239741607 PREDICTED: hypothetical protein XP_002342248 [Homo ... 31 3.4
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 30 4.4
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 30 4.4
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 30 4.4
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 30 4.4
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ... 30 5.7
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 30 5.7
gi|239750438 PREDICTED: hypothetical protein [Homo sapiens] 30 5.7
>gi|156151413 MUS81 endonuclease homolog [Homo sapiens]
Length = 551
Score = 1112 bits (2876), Expect = 0.0
Identities = 551/551 (100%), Positives = 551/551 (100%)
Query: 1 MAAPVRLGRKRPLPACPNPLFVRWLTEWRDEATRSRRRTRFVFQKALRSLRRYPLPLRSG 60
MAAPVRLGRKRPLPACPNPLFVRWLTEWRDEATRSRRRTRFVFQKALRSLRRYPLPLRSG
Sbjct: 1 MAAPVRLGRKRPLPACPNPLFVRWLTEWRDEATRSRRRTRFVFQKALRSLRRYPLPLRSG 60
Query: 61 KEAKILQHFGDGLCRMLDERLQRHRTSGGDHAPDSPSGENSPAPQGRLAEVQDSSMPVPA 120
KEAKILQHFGDGLCRMLDERLQRHRTSGGDHAPDSPSGENSPAPQGRLAEVQDSSMPVPA
Sbjct: 61 KEAKILQHFGDGLCRMLDERLQRHRTSGGDHAPDSPSGENSPAPQGRLAEVQDSSMPVPA 120
Query: 121 QPKAGGSGSYWPARHSGARVILLVLYREHLNPNGHHFLTKEELLQRCAQKSPRVAPGSAR 180
QPKAGGSGSYWPARHSGARVILLVLYREHLNPNGHHFLTKEELLQRCAQKSPRVAPGSAR
Sbjct: 121 QPKAGGSGSYWPARHSGARVILLVLYREHLNPNGHHFLTKEELLQRCAQKSPRVAPGSAR 180
Query: 181 PWPALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLAESEGLSLLNVGIGPKEPPGEETA 240
PWPALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLAESEGLSLLNVGIGPKEPPGEETA
Sbjct: 181 PWPALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLAESEGLSLLNVGIGPKEPPGEETA 240
Query: 241 VPGAASAELASEAGVQQQPLELRPGEYRVLLCVDIGETRGGGHRPELLRELQRLHVTHTV 300
VPGAASAELASEAGVQQQPLELRPGEYRVLLCVDIGETRGGGHRPELLRELQRLHVTHTV
Sbjct: 241 VPGAASAELASEAGVQQQPLELRPGEYRVLLCVDIGETRGGGHRPELLRELQRLHVTHTV 300
Query: 301 RKLHVGDFVWVAQETNPRDPANPGELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCG 360
RKLHVGDFVWVAQETNPRDPANPGELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCG
Sbjct: 301 RKLHVGDFVWVAQETNPRDPANPGELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCG 360
Query: 361 LERRVYLVEEHGSVHNLSLPESTLLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQ 420
LERRVYLVEEHGSVHNLSLPESTLLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQ
Sbjct: 361 LERRVYLVEEHGSVHNLSLPESTLLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQ 420
Query: 421 RLYQGHTLRSRPWGTPGNPESGAMTSPNPLCSLLTFSDFNAGAIKNKAQSVREVFARQLM 480
RLYQGHTLRSRPWGTPGNPESGAMTSPNPLCSLLTFSDFNAGAIKNKAQSVREVFARQLM
Sbjct: 421 RLYQGHTLRSRPWGTPGNPESGAMTSPNPLCSLLTFSDFNAGAIKNKAQSVREVFARQLM 480
Query: 481 QVRGVSGEKAAALVDRYSTPASLLAAYDACATPKEQETLLSTIKCGRLQRNLGPALSRTL 540
QVRGVSGEKAAALVDRYSTPASLLAAYDACATPKEQETLLSTIKCGRLQRNLGPALSRTL
Sbjct: 481 QVRGVSGEKAAALVDRYSTPASLLAAYDACATPKEQETLLSTIKCGRLQRNLGPALSRTL 540
Query: 541 SQLYCSYGPLT 551
SQLYCSYGPLT
Sbjct: 541 SQLYCSYGPLT 551
>gi|22748969 essential meiotic endonuclease 1 homolog 1 [Homo
sapiens]
Length = 570
Score = 49.7 bits (117), Expect = 7e-06
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 474 VFARQLMQVRGVSGEKAAALVDRYSTPASLLAAYDACATPKEQETLLSTIKCGR------ 527
V+ RQ+ Q+ VS E A+A+V+ Y +P L+ AY C + KE++ LL+ I+ R
Sbjct: 481 VWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRGEGVTS 540
Query: 528 LQRNLGPALSRTL 540
R +GP LSR +
Sbjct: 541 TSRRIGPELSRRI 553
>gi|58197552 essential meiotic endonuclease 1 homolog 2 [Homo
sapiens]
Length = 444
Score = 37.7 bits (86), Expect = 0.028
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 471 VREVFARQLMQVRGVSGEKAAALVDRYSTPASLLAAYDACATPKEQETLLSTIKC----G 526
++ + RQ+ Q VS A A+V + +P L A +AC+T +E+ LL+ + G
Sbjct: 354 LQAAWRRQIRQFSRVSPAVADAVVTAFPSPRLLQQALEACSTERERMGLLADLPVPPSEG 413
Query: 527 RLQRNLGPALSRTLSQLYCSYGP 549
R +GP LSR + + P
Sbjct: 414 GRPRRVGPDLSRRICLFLTTANP 436
>gi|239753043 PREDICTED: hypothetical protein [Homo sapiens]
Length = 451
Score = 33.5 bits (75), Expect = 0.52
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 62 EAKILQHFGDGLCRMLDERLQRHRTSGGDHAPD-----SPSGENSPAPQGRLAEVQDSSM 116
+ ++ + +GL R + + L SGG + PD +P +PAPQG + + ++
Sbjct: 359 DIELYSQYLEGLRRFISQELPASSPSGGTNRPDLSNKAAPGPHPAPAPQGLHVDPR-AAQ 417
Query: 117 PVPAQPKAGGSGSYWPARHS 136
P QP+ G + A HS
Sbjct: 418 GTPLQPRGCGRCTGNRATHS 437
>gi|75750484 cardiomyopathy associated 4 isoform 2 [Homo sapiens]
Length = 929
Score = 32.7 bits (73), Expect = 0.89
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Query: 187 SLLHRNLVLRTHQPARYSLTPEGLELAQKLAESEGLSLLNVGIGPKEPPGEETAV 241
S+ HR LV+ Y+L ELA+KL ESE L +L V +G +EP ++ V
Sbjct: 861 SVQHRGLVIA------YNLLAADAELAKKLVESELLEILTV-VGKQEPDEKKAEV 908
>gi|27477061 cardiomyopathy associated 4 isoform 1 [Homo sapiens]
Length = 931
Score = 32.7 bits (73), Expect = 0.89
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Query: 187 SLLHRNLVLRTHQPARYSLTPEGLELAQKLAESEGLSLLNVGIGPKEPPGEETAV 241
S+ HR LV+ Y+L ELA+KL ESE L +L V +G +EP ++ V
Sbjct: 863 SVQHRGLVIA------YNLLAADAELAKKLVESELLEILTV-VGKQEPDEKKAEV 910
>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 32.3 bits (72), Expect = 1.2
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 158 LTKEELLQRCAQKSPRVAPGSARPWPALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLA 217
L + E Q AQ+S + G +P P R L + + +R S TP+ +
Sbjct: 3189 LRQNETPQPAAQRSGHLYTGREQPAPNHRGSLPVTTIFSGPKHSRSSPTPQ----FSVVG 3244
Query: 218 ESEGLSLLNVGIGPKEPPGEETAVP 242
S L LN+ + P P E+T P
Sbjct: 3245 SSRSLQELNLSVEPPSPTDEDTQGP 3269
>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 32.3 bits (72), Expect = 1.2
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 158 LTKEELLQRCAQKSPRVAPGSARPWPALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLA 217
L + E Q AQ+S + G +P P R L + + +R S TP+ +
Sbjct: 3189 LRQNETPQPAAQRSGHLYTGREQPAPNHRGSLPVTTIFSGPKHSRSSPTPQ----FSVVG 3244
Query: 218 ESEGLSLLNVGIGPKEPPGEETAVP 242
S L LN+ + P P E+T P
Sbjct: 3245 SSRSLQELNLSVEPPSPTDEDTQGP 3269
>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 32.3 bits (72), Expect = 1.2
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 158 LTKEELLQRCAQKSPRVAPGSARPWPALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLA 217
L + E Q AQ+S + G +P P R L + + +R S TP+ +
Sbjct: 3189 LRQNETPQPAAQRSGHLYTGREQPAPNHRGSLPVTTIFSGPKHSRSSPTPQ----FSVVG 3244
Query: 218 ESEGLSLLNVGIGPKEPPGEETAVP 242
S L LN+ + P P E+T P
Sbjct: 3245 SSRSLQELNLSVEPPSPTDEDTQGP 3269
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 32.3 bits (72), Expect = 1.2
Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 31/147 (21%)
Query: 4 PVRLGRKRPLPACPNPLFVRWLTEWRDEATRSRRRTRFVFQKALRSLRRY---------- 53
P +LG PLPA L+ L + R RTR + LR LR+Y
Sbjct: 2115 PPQLGPVEPLPADLAQLYQHQLNPTLLQQQNKRPRTR-ITDDQLRVLRQYFDINNSPSEE 2173
Query: 54 ---PLPLRSGKEAKILQHFGDGLCRMLDERLQRHRTSGGDHAPDSPSGENSPAPQGRLAE 110
+ +SG K+++H+ L + QR++ DSP ++P P L E
Sbjct: 2174 QIKEMADKSGLPQKVIKHW---FRNTLFKERQRNK--------DSPYNFSNP-PITSLEE 2221
Query: 111 VQ-DSSMPVPAQPKAGGSGSYWPARHS 136
++ DS P P PK YW ++ S
Sbjct: 2222 LKIDSRPPSPEPPKQ----EYWGSKRS 2244
>gi|122937345 myosin VB [Homo sapiens]
Length = 1848
Score = 31.6 bits (70), Expect = 2.0
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 58 RSGKEAKILQHFGDGLCRMLDERLQRHRTSGGDHAPDSPSGENSPAPQGRLAEVQDSSMP 117
R A I+ HF D + + D L+++R + + + P + +D P
Sbjct: 542 RMSNTAFIIVHFADKVEYLSDGFLEKNRDTVYEEQINILKASKFPLVADLFHDDKD---P 598
Query: 118 VPAQPKAGGSGSYWPARHSGARVILLVLYREHLNPNGHHFLTKEELL 164
VPA GS S R AR + V +EH GH F T LL
Sbjct: 599 VPATTPGKGSSSKISVR--SARPPMKVSNKEHKKTVGHQFRTSLHLL 643
>gi|31543392 peroxisome proliferator-activated receptor gamma,
coactivator 1 beta [Homo sapiens]
Length = 1023
Score = 31.6 bits (70), Expect = 2.0
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 29/203 (14%)
Query: 26 TEWRDEATRSRRRTRFVFQKALRSLRRYPLPLRSGKEAKILQHFGDGLCRMLDERLQRH- 84
T WR RS+ + V + + + + +S ++ +H C + D LQ
Sbjct: 177 TAWRQAGLRSKSQRPCVKADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPC 236
Query: 85 -RTSGGDHAPDSPSGENSPAPQGRLAEVQDSSMPVPAQPKAGGSGSYWPARHSGARVI-L 142
++ D GE+ P+PQ A QDS A P A S A R +
Sbjct: 237 LQSPRLPAKEDKEPGEDCPSPQPAPASPQDSLALGRADPGAPVSQEDMQAMVQLIRYMHT 296
Query: 143 LVLYREHLNPNGHHFLTKEELLQRCAQKSPRVAPGSARPW------------PALRSLLH 190
L + L P T E L + C+ S +V +RPW LR LL
Sbjct: 297 YCLPQRKLPPQ-----TPEPLPKACSNPSQQV---RSRPWSRHHSKASWAEFSILRELLA 348
Query: 191 RNLVLRTHQPARY------SLTP 207
++++ +P R SLTP
Sbjct: 349 QDVLCDVSKPYRLATPVYASLTP 371
>gi|5031805 insulin receptor substrate 1 [Homo sapiens]
Length = 1242
Score = 31.2 bits (69), Expect = 2.6
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 77 LDERLQRHRTSGGDHAPDSPSGENSPAP-QGRLAEVQDSSMPVPAQPKAGGSGSYWPA-R 134
LD R ++ S G SP+ + P Q +A +++ + +PA P GGSG P R
Sbjct: 517 LDNRFRKRTHSAGT----SPTITHQKTPSQSSVASIEEYTEMMPAYPPGGGSGGRLPGHR 572
Query: 135 HS 136
HS
Sbjct: 573 HS 574
>gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 31.2 bits (69), Expect = 2.6
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 230 GPKEPPGEETAVPGAASAELASEAGVQQQP--LELRPGEYRVLLCVDIGETRGGGHR 284
G + P +A PG + +S AGV +QP L+LRP + +G RG G R
Sbjct: 160 GSRRPGSPRSASPGVGRSWASSWAGVPRQPLALDLRPTWKAPDARLALGSARGPGRR 216
>gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 31.2 bits (69), Expect = 2.6
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 230 GPKEPPGEETAVPGAASAELASEAGVQQQP--LELRPGEYRVLLCVDIGETRGGGHR 284
G + P +A PG + +S AGV +QP L+LRP + +G RG G R
Sbjct: 160 GSRRPGSPRSASPGVGRSWASSWAGVPRQPLALDLRPTWKAPDARLALGSARGPGRR 216
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 31.2 bits (69), Expect = 2.6
Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 5/157 (3%)
Query: 79 ERLQRHRTSGGDHAPDSPSGENSPAPQGRLAEVQ-DSSMPVPAQPKAGGSGSYWPARHSG 137
E L HR +G P+ +P + ++ Q ++ P P++ G S P +
Sbjct: 869 EGLVAHRVAGVQAREKQPAEPPAPLRRRAASDGQYENQSPEATSPRSPGVRS--PVQCVS 926
Query: 138 ARVILLVLYREHLNPNGHHFLTKEELLQRCAQKSPRVAPGSA-RPWPALRSLLHRNLVLR 196
+ L + P H + +E + SP P S R P L L L+
Sbjct: 927 PELALTIALNPGGRPKEPHLHSYKEAFEEMEGTSPSSPPPSGVRSPPGLAKTPLSALGLK 986
Query: 197 THQPARYSLTPEGLELAQ-KLAESEGLSLLNVGIGPK 232
H PA L P G+ + + E EG ++ + P+
Sbjct: 987 PHNPADILLHPTGVTRRRIQPEEDEGKVVVRLSEEPR 1023
>gi|156151396 heterogeneous nuclear ribonucleoprotein R isoform 3
[Homo sapiens]
Length = 535
Score = 31.2 bits (69), Expect = 2.6
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 88 GGDHAPDSPSGENSPAPQGRLAEVQDSSMPVPAQPKAGGSGSYWPARHSGAR 139
GG AP P G +P P+GR Q + P + GG G PA+ R
Sbjct: 409 GGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGG--PAQQQRGR 458
>gi|156151394 heterogeneous nuclear ribonucleoprotein R isoform 1
[Homo sapiens]
Length = 636
Score = 31.2 bits (69), Expect = 2.6
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 88 GGDHAPDSPSGENSPAPQGRLAEVQDSSMPVPAQPKAGGSGSYWPARHSGAR 139
GG AP P G +P P+GR Q + P + GG G PA+ R
Sbjct: 510 GGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGG--PAQQQRGR 559
>gi|156151392 heterogeneous nuclear ribonucleoprotein R isoform 4
[Homo sapiens]
Length = 532
Score = 31.2 bits (69), Expect = 2.6
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 88 GGDHAPDSPSGENSPAPQGRLAEVQDSSMPVPAQPKAGGSGSYWPARHSGAR 139
GG AP P G +P P+GR Q + P + GG G PA+ R
Sbjct: 406 GGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGG--PAQQQRGR 455
>gi|5031755 heterogeneous nuclear ribonucleoprotein R isoform 2
[Homo sapiens]
Length = 633
Score = 31.2 bits (69), Expect = 2.6
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 88 GGDHAPDSPSGENSPAPQGRLAEVQDSSMPVPAQPKAGGSGSYWPARHSGAR 139
GG AP P G +P P+GR Q + P + GG G PA+ R
Sbjct: 507 GGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGG--PAQQQRGR 556
>gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 422
Score = 30.8 bits (68), Expect = 3.4
Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
Query: 199 QPARYSLTPEGLELAQKLAESEGLSLLNVGIGPKEPPGEETAVPGAASAELASEAGVQQQ 258
+P R+S P GL L + LA E L + P ET PG A EA +
Sbjct: 359 EPGRWSALPSGLLLDELLASQEFLQQVQ--------PFRETEAPGDLQA--LEEASSLEA 408
Query: 259 PLELRPGEYRVLL 271
PL EYR LL
Sbjct: 409 PLSKE--EYRALL 419
>gi|239747741 PREDICTED: hypothetical protein XP_002348258 [Homo
sapiens]
Length = 118
Score = 30.8 bits (68), Expect = 3.4
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 123 KAGGSGSYWPARHSGARVILLVLYREHLNPNGHHFLTKEELLQRCAQKSP--RVAPGSAR 180
+AG ++ P+ G R + + + H T E+L +K P R APG R
Sbjct: 2 EAGNLAAHRPSTQPGRRGVSCLAQKHHPQRTQAVVTTGAEVLAPPQRKVPGGRPAPGRRR 61
Query: 181 PWP 183
PWP
Sbjct: 62 PWP 64
>gi|239741607 PREDICTED: hypothetical protein XP_002342248 [Homo
sapiens]
Length = 118
Score = 30.8 bits (68), Expect = 3.4
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 123 KAGGSGSYWPARHSGARVILLVLYREHLNPNGHHFLTKEELLQRCAQKSP--RVAPGSAR 180
+AG ++ P+ G R + + + H T E+L +K P R APG R
Sbjct: 2 EAGNLAAHRPSTQPGRRGVSCLAQKHHPQRTQAVVTTGAEVLAPPQRKVPGGRPAPGRRR 61
Query: 181 PWP 183
PWP
Sbjct: 62 PWP 64
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 30.4 bits (67), Expect = 4.4
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 93 PDSPSGENSPAPQGRLAEVQDSSMPVPAQPKAG 125
P +P G+ SP+P AEV+ + P PA+P G
Sbjct: 968 PVAPGGQESPSPH--TAEVESEASPPPARPLPG 998
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 30.4 bits (67), Expect = 4.4
Identities = 21/77 (27%), Positives = 36/77 (46%)
Query: 467 KAQSVREVFARQLMQVRGVSGEKAAALVDRYSTPASLLAAYDACATPKEQETLLSTIKCG 526
KA+S R+ RQ+ ++RG GE+ A R+ + L + A A + ++ I G
Sbjct: 1807 KAESGRQQLERQIQELRGRLGEEDAGARARHKMTIAALESKLAQAEEQLEQETRERILSG 1866
Query: 527 RLQRNLGPALSRTLSQL 543
+L R L + Q+
Sbjct: 1867 KLVRRAEKRLKEVVLQV 1883
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 30.4 bits (67), Expect = 4.4
Identities = 21/77 (27%), Positives = 36/77 (46%)
Query: 467 KAQSVREVFARQLMQVRGVSGEKAAALVDRYSTPASLLAAYDACATPKEQETLLSTIKCG 526
KA+S R+ RQ+ ++RG GE+ A R+ + L + A A + ++ I G
Sbjct: 1799 KAESGRQQLERQIQELRGRLGEEDAGARARHKMTIAALESKLAQAEEQLEQETRERILSG 1858
Query: 527 RLQRNLGPALSRTLSQL 543
+L R L + Q+
Sbjct: 1859 KLVRRAEKRLKEVVLQV 1875
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 30.4 bits (67), Expect = 4.4
Identities = 21/77 (27%), Positives = 36/77 (46%)
Query: 467 KAQSVREVFARQLMQVRGVSGEKAAALVDRYSTPASLLAAYDACATPKEQETLLSTIKCG 526
KA+S R+ RQ+ ++RG GE+ A R+ + L + A A + ++ I G
Sbjct: 1840 KAESGRQQLERQIQELRGRLGEEDAGARARHKMTIAALESKLAQAEEQLEQETRERILSG 1899
Query: 527 RLQRNLGPALSRTLSQL 543
+L R L + Q+
Sbjct: 1900 KLVRRAEKRLKEVVLQV 1916
>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
sapiens]
Length = 600
Score = 30.0 bits (66), Expect = 5.7
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 60 GKEAKILQHFGDGLCRMLDERLQ----RHRTSGGDHAPDSPSGENSPAPQGRLAEVQDSS 115
G+ + L+ G G R + R R+R G HA +GE AP G+LA VQ+
Sbjct: 381 GRPGQSLRRSGRGHGRGIQARDTGGGPRNRGQEGTHASGRHAGEG--APHGKLAGVQEER 438
Query: 116 MPV 118
+PV
Sbjct: 439 VPV 441
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 30.0 bits (66), Expect = 5.7
Identities = 27/94 (28%), Positives = 33/94 (35%), Gaps = 6/94 (6%)
Query: 48 RSLRRY--PLPLRSGKEAKILQHFGD----GLCRMLDERLQRHRTSGGDHAPDSPSGENS 101
R L RY P PLR K I FGD G ER + RT S
Sbjct: 18 RKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQARTPAPPRERGESSSPRG 77
Query: 102 PAPQGRLAEVQDSSMPVPAQPKAGGSGSYWPARH 135
P +GR + S A + G+ + A H
Sbjct: 78 PTLRGRAKTTRGRSQGAGATETSAGNSAATAAPH 111
>gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 510
Score = 30.0 bits (66), Expect = 5.7
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 60 GKEAKILQHFGDGLCRMLDERLQ----RHRTSGGDHAPDSPSGENSPAPQGRLAEVQDSS 115
G+ + L+ G G R + R R+R G HA +GE AP G+LA VQ+
Sbjct: 238 GRPGQSLRRSGRGHGRGIQARDTGGGPRNRGQEGTHASGRHAGEG--APHGKLAGVQEER 295
Query: 116 MPV 118
+PV
Sbjct: 296 VPV 298
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,834,432
Number of Sequences: 37866
Number of extensions: 1213477
Number of successful extensions: 4389
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 4352
Number of HSP's gapped (non-prelim): 81
length of query: 551
length of database: 18,247,518
effective HSP length: 107
effective length of query: 444
effective length of database: 14,195,856
effective search space: 6302960064
effective search space used: 6302960064
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.