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Search of human proteins with 155030198
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|155030198 RAP1, GTP-GDP dissociation stimulator 1 isoform 4
[Homo sapiens]
(559 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|155030198 RAP1, GTP-GDP dissociation stimulator 1 isoform 4 [... 1066 0.0
gi|155030200 RAP1, GTP-GDP dissociation stimulator 1 isoform 5 [... 1062 0.0
gi|155030192 RAP1, GTP-GDP dissociation stimulator 1 isoform 1 [... 1043 0.0
gi|155030196 RAP1, GTP-GDP dissociation stimulator 1 isoform 3 [... 1039 0.0
gi|155030194 RAP1, GTP-GDP dissociation stimulator 1 isoform 2 [... 1036 0.0
gi|155030202 RAP1, GTP-GDP dissociation stimulator 1 isoform 6 [... 927 0.0
gi|39812229 karyopherin alpha 5 [Homo sapiens] 59 1e-08
gi|222144293 karyopherin alpha 1 [Homo sapiens] 57 4e-08
gi|189409124 armadillo repeat containing 3 [Homo sapiens] 55 2e-07
gi|4504897 karyopherin alpha 2 [Homo sapiens] 54 5e-07
gi|224589129 karyopherin 7 [Homo sapiens] 52 1e-06
gi|6912478 karyopherin alpha 6 [Homo sapiens] 49 2e-05
gi|94536840 transmembrane and coiled-coil domains 6 [Homo sapiens] 42 0.002
gi|91206450 ankyrin and armadillo repeat containing [Homo sapiens] 41 0.003
gi|11034811 catenin (cadherin-associated protein), delta 2 (neur... 40 0.004
gi|53829376 plakophilin 4 isoform b [Homo sapiens] 40 0.007
gi|53829374 plakophilin 4 isoform a [Homo sapiens] 40 0.007
gi|31657114 armadillo repeat containing 4 [Homo sapiens] 38 0.021
gi|6912678 sperm associated antigen 6 isoform 1 [Homo sapiens] 37 0.048
gi|27262641 sperm associated antigen 6 isoform 2 [Homo sapiens] 37 0.048
gi|4504901 karyopherin alpha 4 [Homo sapiens] 37 0.048
gi|146231975 catenin, delta 1 isoform 3A [Homo sapiens] 37 0.062
gi|146231948 catenin, delta 1 isoform 3A [Homo sapiens] 37 0.062
gi|146231994 catenin, delta 1 isoform 3A [Homo sapiens] 37 0.062
gi|146231977 catenin, delta 1 isoform 3AC [Homo sapiens] 37 0.062
gi|146231946 catenin, delta 1 isoform 3B [Homo sapiens] 37 0.062
gi|146231991 catenin, delta 1 isoform 3AB [Homo sapiens] 37 0.062
gi|146231970 catenin, delta 1 isoform 3ABC [Homo sapiens] 37 0.062
gi|146231942 catenin, delta 1 isoform 1A [Homo sapiens] 37 0.062
gi|146231968 catenin, delta 1 isoform 1A [Homo sapiens] 37 0.062
>gi|155030198 RAP1, GTP-GDP dissociation stimulator 1 isoform 4
[Homo sapiens]
Length = 559
Score = 1066 bits (2756), Expect = 0.0
Identities = 559/559 (100%), Positives = 559/559 (100%)
Query: 1 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT 60
MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT
Sbjct: 1 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT 60
Query: 61 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD 120
PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD
Sbjct: 61 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD 120
Query: 121 SHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEEL 180
SHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEEL
Sbjct: 121 SHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEEL 180
Query: 181 VKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITE 240
VKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITE
Sbjct: 181 VKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITE 240
Query: 241 LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDA 300
LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDA
Sbjct: 241 LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDA 300
Query: 301 NCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVL 360
NCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVL
Sbjct: 301 NCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVL 360
Query: 361 KFLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNR 420
KFLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNR
Sbjct: 361 KFLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNR 420
Query: 421 LLSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKD 480
LLSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKD
Sbjct: 421 LLSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKD 480
Query: 481 LESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHE 540
LESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHE
Sbjct: 481 LESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHE 540
Query: 541 NKSVAQQASLTEQRLTVES 559
NKSVAQQASLTEQRLTVES
Sbjct: 541 NKSVAQQASLTEQRLTVES 559
>gi|155030200 RAP1, GTP-GDP dissociation stimulator 1 isoform 5
[Homo sapiens]
Length = 558
Score = 1062 bits (2747), Expect = 0.0
Identities = 557/557 (100%), Positives = 557/557 (100%)
Query: 3 DNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTPQ 62
DNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTPQ
Sbjct: 2 DNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTPQ 61
Query: 63 SSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSH 122
SSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSH
Sbjct: 62 SSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSH 121
Query: 123 SLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVK 182
SLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVK
Sbjct: 122 SLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVK 181
Query: 183 LFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELK 242
LFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELK
Sbjct: 182 LFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELK 241
Query: 243 TGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANC 302
TGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANC
Sbjct: 242 TGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANC 301
Query: 303 IHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKF 362
IHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKF
Sbjct: 302 IHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKF 361
Query: 363 LKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLL 422
LKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLL
Sbjct: 362 LKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLL 421
Query: 423 SALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLE 482
SALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLE
Sbjct: 422 SALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLE 481
Query: 483 SAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENK 542
SAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENK
Sbjct: 482 SAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENK 541
Query: 543 SVAQQASLTEQRLTVES 559
SVAQQASLTEQRLTVES
Sbjct: 542 SVAQQASLTEQRLTVES 558
>gi|155030192 RAP1, GTP-GDP dissociation stimulator 1 isoform 1
[Homo sapiens]
Length = 608
Score = 1043 bits (2696), Expect = 0.0
Identities = 559/608 (91%), Positives = 559/608 (91%), Gaps = 49/608 (8%)
Query: 1 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT 60
MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT
Sbjct: 1 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT 60
Query: 61 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD 120
PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD
Sbjct: 61 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD 120
Query: 121 SH-------------------------------------------------SLQAQLINM 131
SH SLQAQLINM
Sbjct: 121 SHEGRSAVDQAGGAQIVIDHLRSLCSITDPANEKLLTVFCGMLMNYSNENDSLQAQLINM 180
Query: 132 GVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHD 191
GVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHD
Sbjct: 181 GVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHD 240
Query: 192 KREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLL 251
KREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLL
Sbjct: 241 KREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLL 300
Query: 252 LLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIV 311
LLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIV
Sbjct: 301 LLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIV 360
Query: 312 EKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQ 371
EKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQ
Sbjct: 361 EKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQ 420
Query: 372 FKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKS 431
FKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKS
Sbjct: 421 FKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKS 480
Query: 432 KDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILH 491
KDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILH
Sbjct: 481 KDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILH 540
Query: 492 RLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLT 551
RLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLT
Sbjct: 541 RLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLT 600
Query: 552 EQRLTVES 559
EQRLTVES
Sbjct: 601 EQRLTVES 608
>gi|155030196 RAP1, GTP-GDP dissociation stimulator 1 isoform 3
[Homo sapiens]
Length = 607
Score = 1039 bits (2687), Expect = 0.0
Identities = 557/606 (91%), Positives = 557/606 (91%), Gaps = 49/606 (8%)
Query: 3 DNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTPQ 62
DNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTPQ
Sbjct: 2 DNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTPQ 61
Query: 63 SSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSH 122
SSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSH
Sbjct: 62 SSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSH 121
Query: 123 -------------------------------------------------SLQAQLINMGV 133
SLQAQLINMGV
Sbjct: 122 EGRSAVDQAGGAQIVIDHLRSLCSITDPANEKLLTVFCGMLMNYSNENDSLQAQLINMGV 181
Query: 134 IPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHDKR 193
IPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHDKR
Sbjct: 182 IPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHDKR 241
Query: 194 EMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLLLL 253
EMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLLLL
Sbjct: 242 EMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLLLL 301
Query: 254 GDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIVEK 313
GDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIVEK
Sbjct: 302 GDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIVEK 361
Query: 314 LMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQFK 373
LMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQFK
Sbjct: 362 LMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQFK 421
Query: 374 LLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKSKD 433
LLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKSKD
Sbjct: 422 LLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKSKD 481
Query: 434 VIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILHRL 493
VIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILHRL
Sbjct: 482 VIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILHRL 541
Query: 494 LADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLTEQ 553
LADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLTEQ
Sbjct: 542 LADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLTEQ 601
Query: 554 RLTVES 559
RLTVES
Sbjct: 602 RLTVES 607
>gi|155030194 RAP1, GTP-GDP dissociation stimulator 1 isoform 2
[Homo sapiens]
Length = 607
Score = 1036 bits (2680), Expect = 0.0
Identities = 558/608 (91%), Positives = 558/608 (91%), Gaps = 50/608 (8%)
Query: 1 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT 60
MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT
Sbjct: 1 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT 60
Query: 61 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD 120
PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD
Sbjct: 61 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD 120
Query: 121 SH-------------------------------------------------SLQAQLINM 131
SH SLQAQLINM
Sbjct: 121 SHEGRSAVDQAGGAQIVIDHLRSLCSITDPANEKLLTVFCGMLMNYSNENDSLQAQLINM 180
Query: 132 GVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHD 191
GVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHD
Sbjct: 181 GVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHD 240
Query: 192 KREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLL 251
KREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLL
Sbjct: 241 KREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLL 300
Query: 252 LLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIV 311
LLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIV
Sbjct: 301 LLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIV 360
Query: 312 EKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQ 371
EKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQ
Sbjct: 361 EKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQ 420
Query: 372 FKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKS 431
FKLLGTLRMLIDAQ EAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKS
Sbjct: 421 FKLLGTLRMLIDAQ-EAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKS 479
Query: 432 KDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILH 491
KDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILH
Sbjct: 480 KDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILH 539
Query: 492 RLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLT 551
RLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLT
Sbjct: 540 RLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLT 599
Query: 552 EQRLTVES 559
EQRLTVES
Sbjct: 600 EQRLTVES 607
>gi|155030202 RAP1, GTP-GDP dissociation stimulator 1 isoform 6
[Homo sapiens]
Length = 516
Score = 927 bits (2395), Expect = 0.0
Identities = 503/559 (89%), Positives = 508/559 (90%), Gaps = 43/559 (7%)
Query: 1 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT 60
MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT
Sbjct: 1 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT 60
Query: 61 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD 120
PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKD
Sbjct: 61 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKD----------------- 103
Query: 121 SHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEEL 180
Q L+ G + LG C ++ +SSKEQFASTNIAEEL
Sbjct: 104 ----QEVLLQTG------RALGNICYDS----------------QSSKEQFASTNIAEEL 137
Query: 181 VKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITE 240
VKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITE
Sbjct: 138 VKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITE 197
Query: 241 LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDA 300
LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDA
Sbjct: 198 LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDA 257
Query: 301 NCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVL 360
NCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVL
Sbjct: 258 NCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVL 317
Query: 361 KFLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNR 420
KFLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNR
Sbjct: 318 KFLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNR 377
Query: 421 LLSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKD 480
LLSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKD
Sbjct: 378 LLSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKD 437
Query: 481 LESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHE 540
LESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHE
Sbjct: 438 LESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHE 497
Query: 541 NKSVAQQASLTEQRLTVES 559
NKSVAQQASLTEQRLTVES
Sbjct: 498 NKSVAQQASLTEQRLTVES 516
>gi|39812229 karyopherin alpha 5 [Homo sapiens]
Length = 539
Score = 58.9 bits (141), Expect = 1e-08
Identities = 61/290 (21%), Positives = 125/290 (43%), Gaps = 21/290 (7%)
Query: 39 NTETSEKIQASGILQLFASLLTPQSSC--KAKVANIIAEVAKNEFMRIPCV-DAGLISPL 95
N + IQ G++Q F L +C + + A + +A F+ V + G +
Sbjct: 116 NPPIDQVIQKPGVVQRFVKFLERNENCTLQFEAAWALTNIASGTFLHTKVVIETGAVPIF 175
Query: 96 VQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCL 155
++LLNS+ ++V Q ALGNI D+ + ++N ++P L++LL + T +
Sbjct: 176 IKLLNSEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELL-TNSNRLTTTRNAV 234
Query: 156 VAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHDKREMIFEVLAPLAENDAIKLQ-LV 214
A NL ++ F+ + ++ + D + L+ L++ K+Q ++
Sbjct: 235 WALSNLCRGKNPPPNFSKVSPCLNVLSRLLFSSDPDVLADVCWALSYLSDGPNDKIQAVI 294
Query: 215 EAGLVECLLEIVQQ---KVDSDKEDDITELKTGSDLMVLLLLGDESMQKLFEGGKGSVFQ 271
++G+ L+E++ KV S + + TG D+ ++L ++ L
Sbjct: 295 DSGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALPCL---------- 344
Query: 272 RVLSWIPSNNHQLQLAGALAIANF-ARNDANCIHMVDNGIVEKLMDLLDR 320
L + S ++ ++N A N A ++D I L+++L +
Sbjct: 345 --LHLLSSPKESIRKEACWTVSNITAGNRAQIQAVIDANIFPVLIEILQK 392
>gi|222144293 karyopherin alpha 1 [Homo sapiens]
Length = 538
Score = 57.0 bits (136), Expect = 4e-08
Identities = 62/288 (21%), Positives = 122/288 (42%), Gaps = 21/288 (7%)
Query: 39 NTETSEKIQASGILQLFASLLTPQSSCKAKVAN--IIAEVAKNEFMRIPCV-DAGLISPL 95
N E I G++ F L + +C + + ++ +A ++ V AG +
Sbjct: 115 NPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIF 174
Query: 96 VQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCL 155
++LL+S+ ++V Q ALGNI DS + +++ ++P L++L +T +
Sbjct: 175 IELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQ-NRLTMTRNAV 233
Query: 156 VAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHDKREMIFEVLAPLAENDAIKLQ-LV 214
A NL +S +FA + ++ + D L+ L++ K+Q ++
Sbjct: 234 WALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVI 293
Query: 215 EAGLVECLLEIVQQ---KVDSDKEDDITELKTGSDLMVLLLLGDESMQKLFEGGKGSVFQ 271
+AG+ L+E++ KV S + + TG D+ ++L ++Q L
Sbjct: 294 DAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSL---------- 343
Query: 272 RVLSWIPSNNHQLQLAGALAIANF-ARNDANCIHMVDNGIVEKLMDLL 318
L + S ++ I+N A N A ++D I L+ +L
Sbjct: 344 --LHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISIL 389
>gi|189409124 armadillo repeat containing 3 [Homo sapiens]
Length = 872
Score = 54.7 bits (130), Expect = 2e-07
Identities = 99/477 (20%), Positives = 198/477 (41%), Gaps = 50/477 (10%)
Query: 87 VDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQ 146
+++ + +V +LNS ++E+L + A+ + L+ +G + L KLL H +
Sbjct: 22 IESKKAATVVLMLNSPEEEILAKACEAIYKFALKGEENKTTLLELGAVEPLTKLL-TH-E 79
Query: 147 NAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHDKREMIFEVLAPLAEN 206
+ + + FG LA K+ ++ ++ + E E LA ++
Sbjct: 80 DKIVRRNATMIFGILASNNDVKKLLRELDVMNSVIAQLAPEEEVVIHEFASLCLANMSAE 139
Query: 207 DAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLLLLGDESMQKLFEGGK 266
K+Q+ E G +E L+ ++ S + D+ K + + L+ + KL E
Sbjct: 140 YTSKVQIFEHGGLEPLIRLL-----SSPDPDVK--KNSMECIYNLVQDFQCRAKLQE--- 189
Query: 267 GSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIVEKLMDLLD-RHVEDG 325
+ +L + S +QL + A + + + DN ++ L+ +L+ + + D
Sbjct: 190 LNAIPPILDLLKSEYPVIQLLALKTLGVIANDKESRTMLRDNQGLDHLIKILETKELNDL 249
Query: 326 NVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQFKLLGTLRMLIDAQ 385
++ AL+ + N + ++ G + +L F ++ P D Q
Sbjct: 250 HI----EALAVIANCLEDMDTMVQIQQTGGLKKLLSFAENSTIP-------------DIQ 292
Query: 386 AEAAEQLGK------NVKLV-ERLVEWC----EAKDHAGVMGESNRLLSALIRHSKSKDV 434
AA+ + K N KL E+ VE C ++ G +++ +SA+ +S SKD
Sbjct: 293 KNAAKAITKAAYDPENRKLFHEQEVEKCLVALLGSENDGTKIAASQAISAMCENSGSKD- 351
Query: 435 IKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILHRLL 494
+ GI L+ + S++ ++ A +ALA + A E A + L LL
Sbjct: 352 ---FFNNQGIPQLIQLLKSDNEEVREAAALALANLTTCNPANANAAAE-ADGIDPLINLL 407
Query: 495 ADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLD-VVSKLRSHENKSVAQQASL 550
+ +R N+ ++ + E L +Q+ + ++S LRS N V +A+L
Sbjct: 408 SSKRDGAIA--NAATVLTNMAMQEPLRLNIQNHDIMHAIISPLRS-ANTVVQSKAAL 461
>gi|4504897 karyopherin alpha 2 [Homo sapiens]
Length = 529
Score = 53.5 bits (127), Expect = 5e-07
Identities = 81/389 (20%), Positives = 162/389 (41%), Gaps = 34/389 (8%)
Query: 35 LAQNNTETSEKIQASGILQLFASLL--TPQSSCKAKVANIIAEVAKNEFMRIPCV-DAGL 91
L++ + I +G++ F S L T S + + A + +A + V D G
Sbjct: 104 LSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGA 163
Query: 92 ISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALT 151
I + LL S + Q ALGNI D + +I G + L+ LL + ++
Sbjct: 164 IPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLAC 223
Query: 152 EMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHDKREMIFEVLAPLA-----EN 206
L+ L +K + E+++ + + HD E++ + ++ N
Sbjct: 224 GYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPN 283
Query: 207 DAIKLQLVEAGLVECLLEIV---QQKVDSDKEDDITELKTGSDLMVLLLLGDESMQKLFE 263
+ I + +V+ G+V L++++ + + + I + TG+ DE Q + +
Sbjct: 284 ERIGM-VVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGT---------DEQTQVVID 333
Query: 264 GGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIVEKLMDLLDRHVE 323
G +VF +L+ P N Q + ++ R D +V++G+V L+ +L +
Sbjct: 334 AGALAVFPSLLT-NPKTNIQKEATWTMSNITAGRQD-QIQQVVNHGLVPFLVSVLSK--- 388
Query: 324 DGNVTVQHAALSALRNLAI--PVINKAKMLSAGVTEAVLKFLKSEMPPVQFKLLGTLRML 381
+ Q A+ A+ N V ++ G+ E ++ L ++ + +L + +
Sbjct: 389 -ADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNI 447
Query: 382 IDAQAEAAEQLGKNVKLVERLVEWCEAKD 410
+AAE+LG+ KL ++E C D
Sbjct: 448 F----QAAEKLGETEKL-SIMIEECGGLD 471
>gi|224589129 karyopherin 7 [Homo sapiens]
Length = 516
Score = 52.0 bits (123), Expect = 1e-06
Identities = 64/311 (20%), Positives = 136/311 (43%), Gaps = 22/311 (7%)
Query: 87 VDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQ 146
V+ G I PL++LL+S + V Q ALGNI D + +I IP L+ L+
Sbjct: 153 VEGGAIQPLIELLSSSNVAVCEQAVWALGNIAGDGPEFRDNVITSNAIPHLLALIS---P 209
Query: 147 NAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHDKREMIFE---VLAPL 203
+T + + + L+ L +K + ++++ ++H E++ + L+ L
Sbjct: 210 TLPITFLRNITW-TLSNLCRNKNPYPCDTAVKQILPALLHLLQHQDSEVLSDACWALSYL 268
Query: 204 AENDAIKL-QLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLLLLGDESMQKLF 262
+ ++ Q+V G++ L+ ++ S+ L+T +++ DE Q
Sbjct: 269 TDGSNKRIGQVVNTGVLPRLVVLM---TSSELNVLTPSLRTVGNIVTGT---DEQTQMAI 322
Query: 263 EGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIVEKLMDLLDRHV 322
+ G +V ++L N +Q A A++N A A H + + ++ L +
Sbjct: 323 DAGMLNVLPQLLQ---HNKPSIQKEAAWALSNVA---AGPCHHIQQLLAYDVLPPLVALL 376
Query: 323 EDGNVTVQHAALSALRNLA--IPVINKAKMLSAGVTEAVLKFLKSEMPPVQFKLLGTLRM 380
++G VQ A+ + N A + +++ +GV E ++ L + + +L +
Sbjct: 377 KNGEFKVQKEAVWMVANFATGATMDQLIQLVHSGVLEPLVNLLTAPDVKIVLIILDVISC 436
Query: 381 LIDAQAEAAEQ 391
++ A + +E+
Sbjct: 437 ILQAAEKRSEK 447
>gi|6912478 karyopherin alpha 6 [Homo sapiens]
Length = 536
Score = 48.5 bits (114), Expect = 2e-05
Identities = 60/285 (21%), Positives = 118/285 (41%), Gaps = 21/285 (7%)
Query: 44 EKIQASGILQLFASLLTPQSSC--KAKVANIIAEVAKNEFMRIPCV-DAGLISPLVQLLN 100
E I ++ F L +C + + A + +A + V +AG + ++LLN
Sbjct: 118 EVINTPRVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLN 177
Query: 101 SKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGN 160
S ++V Q ALGNI DS + ++N ++ L+ LL +T + A N
Sbjct: 178 SDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLL-TKSTRLTMTRNAVWALSN 236
Query: 161 LAELESSKEQFASTNIAEELVKLFKKQIEHDKREMIFEVLAPLAENDAIKLQ-LVEAGLV 219
L ++ +FA + ++ + D L+ L++ K+Q ++++G+
Sbjct: 237 LCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVC 296
Query: 220 ECLLEIVQQ---KVDSDKEDDITELKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSW 276
L+E++ KV S + + TG D+ ++L ++ L L
Sbjct: 297 RRLVELLMHNDYKVASPALRAVGNIVTGDDIQTQVILNCSALPCL------------LHL 344
Query: 277 IPSNNHQLQLAGALAIANF-ARNDANCIHMVDNGIVEKLMDLLDR 320
+ S ++ I+N A N A ++D I L+++L +
Sbjct: 345 LSSPKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQK 389
>gi|94536840 transmembrane and coiled-coil domains 6 [Homo sapiens]
Length = 493
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 4/161 (2%)
Query: 21 EDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTP-QSSCKAKVANIIAEVAKN 79
E EG L L + L T+ + I+ G ++ LLT Q+ + + A + E++ +
Sbjct: 80 EKEREGALVSLRRGLQHPETQQTF-IRLEGSMRTLVGLLTSNQALLQLEAARCLHELSHS 138
Query: 80 EFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVK 139
E + S L+ L+S + + LGN+ +S +++ QL+ G++P L
Sbjct: 139 EQSTVAEACLPATSYLLTYLSSHSSDFIELCLYTLGNLIVESEAVRRQLLPQGIVPALAA 198
Query: 140 LLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEEL 180
I + A+ E A L + E + E+ + +A L
Sbjct: 199 C--IQSPHVAVLEALGYALSQLLQAEEAPEKIIPSILASTL 237
>gi|91206450 ankyrin and armadillo repeat containing [Homo sapiens]
Length = 1363
Score = 40.8 bits (94), Expect = 0.003
Identities = 94/471 (19%), Positives = 191/471 (40%), Gaps = 60/471 (12%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLL-----GIHCQNAA 149
LV++L + + + +L IC + +++ G IP L+ LL + C+
Sbjct: 634 LVEMLQCESYKRRMMAVMSLEVICLANDQYWRCILDAGTIPALINLLKSSKIKLQCKTVG 693
Query: 150 LTEMCLVAFGNLAELESSKEQFASTNIAEELVKLF--KKQIEHDKREMIFEVLAPLAEND 207
L N++ +S+ L+ L + H + +I +A D
Sbjct: 694 L-------LSNISTHKSAVHALVEAGGIPSLINLLVCDEPEVHSRCAVILYDIAQCENKD 746
Query: 208 AIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLLLLGDESMQKLFEGGKG 267
I + + L+ ++ +++ L + + +L +G+E+ Q+ KG
Sbjct: 747 VI----AKYNGIPSLINLLNLNIEN-------VLVNVMNCIRVLCIGNENNQRAVREHKG 795
Query: 268 SVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVD-NGIVEKLMDLLDRHVEDGN 326
+ ++ ++ S++ L+ + AIA R++ + G + L+ L +
Sbjct: 796 LPY--LIRFLSSDSDVLKAVSSAAIAEVGRDNKEIQDAIAMEGAIPPLVALF----KGKQ 849
Query: 327 VTVQHAALSALRNLAI--PVINKAKMLSAGVTEAVLKFLKSEMPPVQ----FKLLGTLRM 380
++VQ A+ +LA +I KA L +T+ +LK LK+ V+ L
Sbjct: 850 ISVQMKGAMAVESLASHNALIQKA-FLEKSLTKYLLKLLKAFQIDVKEQGAVALWALAGQ 908
Query: 381 LIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKSKDVIKTIVQ 440
+ Q AEQ+G + ++ L+ + G GE+ LS R +++ I +
Sbjct: 909 TLKQQKYMAEQIGYSF-IINMLLSPSAKMQYVG--GEAVIALSKDSRMHQNQ-----ICE 960
Query: 441 SGGIKHLVTMATSEHVIMQNEALVALALIAALELGTA-------EKDLESAKLVQILHRL 493
GI LV + I + L + + ++ +G A ++ + +L +L
Sbjct: 961 GNGIAPLVRLLRIS-TIAEGTLLSVIRAVGSICIGVAHTSNPVSQQFVVDENAFPVLIQL 1019
Query: 494 LADERSAPEIKYN-SMVLICALMGSECLHKEVQD---LAFLDVVSKLRSHE 540
L + S P IK + L C ++G++ L K++ + + DV+ L S E
Sbjct: 1020 LRNHPS-PNIKVEVAFSLACIVLGNDVLQKDLHENEGFEYADVLYLLHSTE 1069
>gi|11034811 catenin (cadherin-associated protein), delta 2 (neural
plakophilin-related arm-repeat protein) [Homo sapiens]
Length = 1225
Score = 40.4 bits (93), Expect = 0.004
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMC 154
++Q+L + V L ++C+ + ++A++ G I LV LL + +TE+
Sbjct: 555 VIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLL-----DHRMTEVH 609
Query: 155 LVAFGNLAEL------ESSKEQFASTNIAEELVKLFKKQIEHDKREMIFEVLAPLAENDA 208
A G L L + +K + LV+L +K + + RE++ VL L+ DA
Sbjct: 610 RSACGALRNLVYGKANDDNKIALKNCGGIPALVRLLRKTTDLEIRELVTGVLWNLSSCDA 669
Query: 209 IKLQLVEAGL 218
+K+ +++ L
Sbjct: 670 LKMPIIQDAL 679
>gi|53829376 plakophilin 4 isoform b [Homo sapiens]
Length = 1149
Score = 39.7 bits (91), Expect = 0.007
Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLG---IHCQNAALT 151
++ +L + V L ++C+ + ++ ++ +G I LV LL + Q A
Sbjct: 533 VIHMLQHQFPSVQANAAAYLQHLCFGDNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACG 592
Query: 152 EMCLVAFGNLAELESSKEQFASTNIA--EELVKLFKKQIEHDKREMIFEVLAPLAENDAI 209
+ + FG + + + A N+ L++L +K I+ + RE++ VL L+ DA+
Sbjct: 593 ALRNLVFGK----STDENKIAMKNVGGIPALLRLLRKSIDAEVRELVTGVLWNLSSCDAV 648
Query: 210 KLQLVEAGL 218
K+ ++ L
Sbjct: 649 KMTIIRDAL 657
>gi|53829374 plakophilin 4 isoform a [Homo sapiens]
Length = 1192
Score = 39.7 bits (91), Expect = 0.007
Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLG---IHCQNAALT 151
++ +L + V L ++C+ + ++ ++ +G I LV LL + Q A
Sbjct: 533 VIHMLQHQFPSVQANAAAYLQHLCFGDNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACG 592
Query: 152 EMCLVAFGNLAELESSKEQFASTNIA--EELVKLFKKQIEHDKREMIFEVLAPLAENDAI 209
+ + FG + + + A N+ L++L +K I+ + RE++ VL L+ DA+
Sbjct: 593 ALRNLVFGK----STDENKIAMKNVGGIPALLRLLRKSIDAEVRELVTGVLWNLSSCDAV 648
Query: 210 KLQLVEAGL 218
K+ ++ L
Sbjct: 649 KMTIIRDAL 657
>gi|31657114 armadillo repeat containing 4 [Homo sapiens]
Length = 1044
Score = 38.1 bits (87), Expect = 0.021
Identities = 77/358 (21%), Positives = 136/358 (37%), Gaps = 47/358 (13%)
Query: 19 KTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTPQSSCKAKVANIIAEVAK 78
+ E E C + Q + ET + ++ G L+ ASLL + K ++A + + K
Sbjct: 685 ENEQLQEHCAMAIYQCA--EDKETRDLVRLHGGLKPLASLLNNTDN-KERLAAVTGAIWK 741
Query: 79 NEFMRIPCV---DAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIP 135
+ + I LV LL + +EVL+ ALG C + + G+ P
Sbjct: 742 CSISKENVTKFREYKAIETLVGLLTDQPEEVLVNVVGALGECCQERENRVIVRKCGGIQP 801
Query: 136 TLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHDKREM 195
+ L+GI N AL A G A +E L+ K D +
Sbjct: 802 LVNLLVGI---NQALLVNVTKAVGACA-VEPESMMIIDRLDGVRLLWSLLKNPHPDVKAS 857
Query: 196 IFEVLAPLAEN--DA------------IKLQLVEAGLVECLLEIVQQKVDSDKEDDITEL 241
L P +N DA + + L+++ E L + + K+ + +
Sbjct: 858 AAWALCPCIKNAKDAGEMVRSFVGGLELIVNLLKSDNKEVLASVCAAITNIAKDQENLAV 917
Query: 242 KTGSDLMVLL-LLGDESMQKL------------------FEGGKGSVFQRVLSWIPSNNH 282
T ++ LL L + + KL G+ ++ ++ SN+
Sbjct: 918 ITDHGVVPLLSKLANTNNNKLRHHLAEAISRCCMWGRNRVAFGEHKAVAPLVRYLKSNDT 977
Query: 283 QLQLAGALAIANFARNDANCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNL 340
+ A A A+ + + NCI M +NG V+ L+D++ +D +Q AA + N+
Sbjct: 978 NVHRATAQALYQLSEDADNCITMHENGAVKLLLDMVGSPDQD----LQEAAAGCISNI 1031
Score = 36.6 bits (83), Expect = 0.062
Identities = 83/408 (20%), Positives = 149/408 (36%), Gaps = 60/408 (14%)
Query: 1 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT 60
+ D D+ K + + + + + C L + ++++T +A GI L L T
Sbjct: 584 LLDCAHDSTKPAQSSLYEARDVEVARCGALALWSCSKSHTNKEAIRKAGGIPLLARLLKT 643
Query: 61 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD 120
+ V + E A E R +I LV+ LNS+++++ A+ D
Sbjct: 644 SHENMLIPVVGTLQECASEENYRAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQCAED 703
Query: 121 SHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKE---QFASTNIA 177
+ ++ G+ P L LL N E G + + SKE +F
Sbjct: 704 KETRDLVRLHGGLKP-LASLLN----NTDNKERLAAVTGAIWKCSISKENVTKFREYKAI 758
Query: 178 EELVKLFKKQIEHDKREMIFEVLAPLAE------NDAI--------KLQLVEAGLVECLL 223
E LV L Q E E++ V+ L E N I L + G+ + LL
Sbjct: 759 ETLVGLLTDQPE----EVLVNVVGALGECCQERENRVIVRKCGGIQPLVNLLVGINQALL 814
Query: 224 EIVQQKVDSDKEDD----ITELKTGSDLMVLLLLGDE----------------------S 257
V + V + + I + G L+ LL
Sbjct: 815 VNVTKAVGACAVEPESMMIIDRLDGVRLLWSLLKNPHPDVKASAAWALCPCIKNAKDAGE 874
Query: 258 MQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIVEKLMDL 317
M + F GG + +++ + S+N ++ + AI N A++ N + D+G+V L
Sbjct: 875 MVRSFVGG----LELIVNLLKSDNKEVLASVCAAITNIAKDQENLAVITDHGVV----PL 926
Query: 318 LDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKS 365
L + N ++H A+ + N+ ++++LKS
Sbjct: 927 LSKLANTNNNKLRHHLAEAISRCCMWGRNRVAFGEHKAVAPLVRYLKS 974
Score = 30.4 bits (67), Expect = 4.5
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 34 ALAQNNTETSEKIQASGILQLFASLL-TPQSSCKAKVANIIAEVAKNEFMRIPCVDAGLI 92
+LAQ + + I+ G L++ +LL T + CK I+ E++ N +R VD G +
Sbjct: 480 SLAQETCQLA--IRDVGGLEVLINLLETDEVKCKIGSLKILKEISHNPQIRQNIVDLGGL 537
Query: 93 SPLVQLLNSKDQEVLLQTGRALGNI 117
+V +L+S + + + N+
Sbjct: 538 PIMVNILDSPHKSLKCLAAETIANV 562
>gi|6912678 sperm associated antigen 6 isoform 1 [Homo sapiens]
Length = 509
Score = 37.0 bits (84), Expect = 0.048
Identities = 26/149 (17%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Query: 12 LKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKI-QASGILQLFASLLTPQSSCKAKVA 70
L + + + E +L+ L +A+++ E ++ + A + L +L P + K ++
Sbjct: 171 LLVLCIQEPEIALKRIAASALSDIAKHSPELAQTVVDAGAVAHLAQMILNPDAKLKHQIL 230
Query: 71 NIIAEVAKNEF-MRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLI 129
+ +++V+K+ + V+A + ++ L KD+ V + I + L ++
Sbjct: 231 SALSQVSKHSVDLAEMVVEAEIFPVVLTCLKDKDEYVKKNASTLIREIAKHTPELSQLVV 290
Query: 130 NMGVIPTLVKLLGIHCQNAALTEMCLVAF 158
N G + ++ +G N L + ++ +
Sbjct: 291 NAGGVAAVIDCIGSCKGNTRLPGIMMLGY 319
Score = 31.6 bits (70), Expect = 2.0
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 422 LSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDL 481
LS + +HS ++ +T+V +G + HL M + ++++ L AL+ ++ + AE +
Sbjct: 191 LSDIAKHSP--ELAQTVVDAGAVAHLAQMILNPDAKLKHQILSALSQVSKHSVDLAEMVV 248
Query: 482 ESAKLVQILHRLLADERSAPEIKYNSMVLI 511
E A++ ++ L D+ +K N+ LI
Sbjct: 249 E-AEIFPVVLTCLKDKDE--YVKKNASTLI 275
>gi|27262641 sperm associated antigen 6 isoform 2 [Homo sapiens]
Length = 458
Score = 37.0 bits (84), Expect = 0.048
Identities = 26/149 (17%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Query: 12 LKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKI-QASGILQLFASLLTPQSSCKAKVA 70
L + + + E +L+ L +A+++ E ++ + A + L +L P + K ++
Sbjct: 171 LLVLCIQEPEIALKRIAASALSDIAKHSPELAQTVVDAGAVAHLAQMILNPDAKLKHQIL 230
Query: 71 NIIAEVAKNEF-MRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLI 129
+ +++V+K+ + V+A + ++ L KD+ V + I + L ++
Sbjct: 231 SALSQVSKHSVDLAEMVVEAEIFPVVLTCLKDKDEYVKKNASTLIREIAKHTPELSQLVV 290
Query: 130 NMGVIPTLVKLLGIHCQNAALTEMCLVAF 158
N G + ++ +G N L + ++ +
Sbjct: 291 NAGGVAAVIDCIGSCKGNTRLPGIMMLGY 319
Score = 31.6 bits (70), Expect = 2.0
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 422 LSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDL 481
LS + +HS ++ +T+V +G + HL M + ++++ L AL+ ++ + AE +
Sbjct: 191 LSDIAKHSP--ELAQTVVDAGAVAHLAQMILNPDAKLKHQILSALSQVSKHSVDLAEMVV 248
Query: 482 ESAKLVQILHRLLADERSAPEIKYNSMVLI 511
E A++ ++ L D+ +K N+ LI
Sbjct: 249 E-AEIFPVVLTCLKDKDE--YVKKNASTLI 275
>gi|4504901 karyopherin alpha 4 [Homo sapiens]
Length = 521
Score = 37.0 bits (84), Expect = 0.048
Identities = 66/320 (20%), Positives = 131/320 (40%), Gaps = 33/320 (10%)
Query: 35 LAQNNTETSEKIQASGILQLFASLLTPQS--SCKAKVANIIAEVAKNEFMRIPCVDAGLI 92
L+ + + + SGIL + L S + + A + +A + V
Sbjct: 99 LSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNA 158
Query: 93 SPL-VQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALT 151
PL ++LL+S Q V Q ALGNI D + +I++GV+ L+ + L
Sbjct: 159 VPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLR 218
Query: 152 EMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHDKREMIFEVLAPL-----AEN 206
+ V + L K+ +E++ I H ++ + + L A N
Sbjct: 219 NVTWV----MVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGN 274
Query: 207 DAIKLQLVEAGLVECLLEIV---QQKVDSDKEDDITELKTGSDLMVLLLLGDESMQKLFE 263
+ I++ ++++G+V L+ ++ + KV + + + TG+D ++L +++
Sbjct: 275 EQIQM-VIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDAL----- 328
Query: 264 GGKGSVFQRVLSWIPSNNHQLQLAGALAIANF-ARNDANCIHMVDNGIVEKLMDLLDRHV 322
S F +L+ ++ ++N A N ++D +V ++ LLD+
Sbjct: 329 ----SHFPALLT---HPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDK-- 379
Query: 323 EDGNVTVQHAALSALRNLAI 342
G+ Q A A+ NL I
Sbjct: 380 --GDFGTQKEAAWAISNLTI 397
>gi|146231975 catenin, delta 1 isoform 3A [Homo sapiens]
Length = 832
Score = 36.6 bits (83), Expect = 0.062
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMC 154
++ +L + V L ++CY + ++ + + IP LV LL + E+
Sbjct: 270 VIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLL-----DHPKKEVH 324
Query: 155 LVAFGNLAELESSKEQFASTNIAE-----ELVKLFKKQIEHDKREMIFEVLAPLAENDAI 209
L A G L + ++Q I LV+L +K + D E+I L L+ +D+I
Sbjct: 325 LGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSI 384
Query: 210 KLQLVEAGLVECLLEIV 226
K+++V+ L E++
Sbjct: 385 KMEIVDHALHALTDEVI 401
>gi|146231948 catenin, delta 1 isoform 3A [Homo sapiens]
Length = 832
Score = 36.6 bits (83), Expect = 0.062
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMC 154
++ +L + V L ++CY + ++ + + IP LV LL + E+
Sbjct: 270 VIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLL-----DHPKKEVH 324
Query: 155 LVAFGNLAELESSKEQFASTNIAE-----ELVKLFKKQIEHDKREMIFEVLAPLAENDAI 209
L A G L + ++Q I LV+L +K + D E+I L L+ +D+I
Sbjct: 325 LGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSI 384
Query: 210 KLQLVEAGLVECLLEIV 226
K+++V+ L E++
Sbjct: 385 KMEIVDHALHALTDEVI 401
>gi|146231994 catenin, delta 1 isoform 3A [Homo sapiens]
Length = 832
Score = 36.6 bits (83), Expect = 0.062
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMC 154
++ +L + V L ++CY + ++ + + IP LV LL + E+
Sbjct: 270 VIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLL-----DHPKKEVH 324
Query: 155 LVAFGNLAELESSKEQFASTNIAE-----ELVKLFKKQIEHDKREMIFEVLAPLAENDAI 209
L A G L + ++Q I LV+L +K + D E+I L L+ +D+I
Sbjct: 325 LGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSI 384
Query: 210 KLQLVEAGLVECLLEIV 226
K+++V+ L E++
Sbjct: 385 KMEIVDHALHALTDEVI 401
>gi|146231977 catenin, delta 1 isoform 3AC [Homo sapiens]
Length = 838
Score = 36.6 bits (83), Expect = 0.062
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMC 154
++ +L + V L ++CY + ++ + + IP LV LL + E+
Sbjct: 270 VIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLL-----DHPKKEVH 324
Query: 155 LVAFGNLAELESSKEQFASTNIAE-----ELVKLFKKQIEHDKREMIFEVLAPLAENDAI 209
L A G L + ++Q I LV+L +K + D E+I L L+ +D+I
Sbjct: 325 LGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSI 384
Query: 210 KLQLVEAGLVECLLEIV 226
K+++V+ L E++
Sbjct: 385 KMEIVDHALHALTDEVI 401
>gi|146231946 catenin, delta 1 isoform 3B [Homo sapiens]
Length = 840
Score = 36.6 bits (83), Expect = 0.062
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMC 154
++ +L + V L ++CY + ++ + + IP LV LL + E+
Sbjct: 270 VIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLL-----DHPKKEVH 324
Query: 155 LVAFGNLAELESSKEQFASTNIAE-----ELVKLFKKQIEHDKREMIFEVLAPLAENDAI 209
L A G L + ++Q I LV+L +K + D E+I L L+ +D+I
Sbjct: 325 LGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSI 384
Query: 210 KLQLVEAGLVECLLEIV 226
K+++V+ L E++
Sbjct: 385 KMEIVDHALHALTDEVI 401
>gi|146231991 catenin, delta 1 isoform 3AB [Homo sapiens]
Length = 861
Score = 36.6 bits (83), Expect = 0.062
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMC 154
++ +L + V L ++CY + ++ + + IP LV LL + E+
Sbjct: 270 VIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLL-----DHPKKEVH 324
Query: 155 LVAFGNLAELESSKEQFASTNIAE-----ELVKLFKKQIEHDKREMIFEVLAPLAENDAI 209
L A G L + ++Q I LV+L +K + D E+I L L+ +D+I
Sbjct: 325 LGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSI 384
Query: 210 KLQLVEAGLVECLLEIV 226
K+++V+ L E++
Sbjct: 385 KMEIVDHALHALTDEVI 401
>gi|146231970 catenin, delta 1 isoform 3ABC [Homo sapiens]
Length = 867
Score = 36.6 bits (83), Expect = 0.062
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMC 154
++ +L + V L ++CY + ++ + + IP LV LL + E+
Sbjct: 270 VIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLL-----DHPKKEVH 324
Query: 155 LVAFGNLAELESSKEQFASTNIAE-----ELVKLFKKQIEHDKREMIFEVLAPLAENDAI 209
L A G L + ++Q I LV+L +K + D E+I L L+ +D+I
Sbjct: 325 LGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSI 384
Query: 210 KLQLVEAGLVECLLEIV 226
K+++V+ L E++
Sbjct: 385 KMEIVDHALHALTDEVI 401
>gi|146231942 catenin, delta 1 isoform 1A [Homo sapiens]
Length = 933
Score = 36.6 bits (83), Expect = 0.062
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMC 154
++ +L + V L ++CY + ++ + + IP LV LL + E+
Sbjct: 371 VIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLL-----DHPKKEVH 425
Query: 155 LVAFGNLAELESSKEQFASTNIAE-----ELVKLFKKQIEHDKREMIFEVLAPLAENDAI 209
L A G L + ++Q I LV+L +K + D E+I L L+ +D+I
Sbjct: 426 LGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSI 485
Query: 210 KLQLVEAGLVECLLEIV 226
K+++V+ L E++
Sbjct: 486 KMEIVDHALHALTDEVI 502
>gi|146231968 catenin, delta 1 isoform 1A [Homo sapiens]
Length = 933
Score = 36.6 bits (83), Expect = 0.062
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 95 LVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMC 154
++ +L + V L ++CY + ++ + + IP LV LL + E+
Sbjct: 371 VIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLL-----DHPKKEVH 425
Query: 155 LVAFGNLAELESSKEQFASTNIAE-----ELVKLFKKQIEHDKREMIFEVLAPLAENDAI 209
L A G L + ++Q I LV+L +K + D E+I L L+ +D+I
Sbjct: 426 LGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSI 485
Query: 210 KLQLVEAGLVECLLEIV 226
K+++V+ L E++
Sbjct: 486 KMEIVDHALHALTDEVI 502
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,712,078
Number of Sequences: 37866
Number of extensions: 634336
Number of successful extensions: 2156
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1997
Number of HSP's gapped (non-prelim): 122
length of query: 559
length of database: 18,247,518
effective HSP length: 107
effective length of query: 452
effective length of database: 14,195,856
effective search space: 6416526912
effective search space used: 6416526912
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.