CASP1 5550

Name: CASP1	Sequence: fasta or formatted (263aa)		NCBI GI: 15431332
Description: caspase 1 isoform delta		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death Pyrin and Associated Functions
Other entries for this name: alt prot [404aa] caspase 1 isoform alpha precursor alt prot [311aa] caspase 1 isoform gamma precursor alt prot [88aa] caspase 1 isoform epsilon alt prot [383aa] caspase 1 isoform beta precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 15 1 C cysteine 3.0 8 1 D aspartate 4.9 13 1 E glutamate 7.6 20 2 F phenylalanine 4.6 12 1 G glycine 5.3 14 1 H histidine 2.7 7 1 I isoleucine 6.8 18 3 K lysine 6.8 18 2 L leucine 7.2 19 2 M methionine 4.6 12 1 N asparagine 3.8 10 1 P proline 4.9 13 1 Q glutamine 4.2 11 1 R arginine 6.5 17 2 S serine 7.6 20 2 T threonine 6.1 16 2 V valine 5.3 14 1 W tryptophan 0.8 2 1 Y tyrosine 1.5 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 caspase 1 isoform delta CASP1 0.955 caspase 1 isoform gamma precursor CASP1 0.886 caspase 1 isoform beta precursor CASP1 0.884 caspase 1 isoform alpha precursor CASP4 0.478 caspase 4 isoform gamma precursor CASP4 0.478 caspase 4 isoform alpha precursor CASP5 0.457 caspase 5 isoform f precursor CASP5 0.457 caspase 5 isoform c CASP5 0.457 caspase 5 isoform b precursor CASP5 0.457 caspase 5 isoform a precursor CASP5 0.337 caspase 5 isoform d CASP1 0.255 caspase 1 isoform epsilon CASP2 0.139 caspase 2 isoform 1 preproprotein CASP14 0.096 caspase 14 precursor CASP10 0.075 caspase 10 isoform d preproprotein CASP10 0.075 caspase 10 isoform b preproprotein CASP10 0.073 caspase 10 isoform a preproprotein CARD16 0.071 caspase-1 dominant-negative inhibitor pseudo-ICE iso... CASP3 0.071 caspase 3 preproprotein CASP3 0.071 caspase 3 preproprotein CASP9 0.067 caspase 9 isoform alpha preproprotein CASP6 0.059 caspase 6 isoform alpha preproprotein CASP8 0.055 caspase 8 isoform G precursor CASP8 0.055 caspase 8 isoform B precursor CASP7 0.055 caspase 7 isoform delta CASP7 0.055 caspase 7 isoform alpha CASP7 0.055 caspase 7 isoform alpha precursor CASP8 0.053 caspase 8 isoform C precursor CASP8 0.053 caspase 8 isoform C precursor CASP8 0.053 caspase 8 isoform A precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.