Guide to the Human Genome
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Name: C7orf57 Sequence: fasta or formatted (295aa) NCBI GI: 154091007
Description:

hypothetical protein LOC136288

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         24           2
 C cysteine            0.3          1           1
 D aspartate           6.1         18           1
 E glutamate           7.5         22           2
 F phenylalanine       2.0          6           1
 G glycine             5.8         17           2
 H histidine           2.4          7           2
 I isoleucine          1.7          5           1
 K lysine              7.8         23           3
 L leucine             6.8         20           2
 M methionine          1.4          4           1
 N asparagine          3.1          9           1
 P proline            10.2         30           2
 Q glutamine           5.4         16           4
 R arginine            6.1         18           2
 S serine             11.5         34           2
 T threonine           4.4         13           1
 V valine              4.1         12           1
 W tryptophan          1.7          5           1
 Y tyrosine            3.7         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC136288 
MYPN                  0.019   myopalladin 
FAM164C               0.017   chromosome 14 open reading frame 140 isoform a [Hom...
TNFSF13B              0.017   tumor necrosis factor superfamily, member 13b isoform...
USP36                 0.017   ubiquitin specific peptidase 36 
BSN                   0.017   bassoon protein 
PHF15                 0.017   PHD finger protein 15 
ACRC                  0.015   ACRC protein 
APC2                  0.015   adenomatosis polyposis coli 2 
MUC17                 0.014   mucin 17 
TRIP10                0.014   thyroid hormone receptor interactor 10 
PPP1R15A              0.014   protein phosphatase 1, regulatory subunit 15A [Homo...
INCENP                0.014   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.014   inner centromere protein antigens 135/155kDa isofor...
SRRM2                 0.014   splicing coactivator subunit SRm300 
SBNO1                 0.014   sno, strawberry notch homolog 1 
GTF2F1                0.012   general transcription factor IIF, polypeptide 1, 74...
SFRS2IP               0.012   splicing factor, arginine/serine-rich 2, interactin...
FHDC1                 0.012   FH2 domain containing 1 
MAST4                 0.012   microtubule associated serine/threonine kinase fami...
RBM26                 0.012   RNA binding motif protein 26 
NOLC1                 0.012   nucleolar and coiled-body phosphoprotein 1 
PRKCSH                0.012   protein kinase C substrate 80K-H isoform 1 
C8orf47               0.012   hypothetical protein LOC203111 
FMN1                  0.010   formin 1 
OGFR                  0.010   opioid growth factor receptor 
ERCC4                 0.010   excision repair cross-complementing rodent repair def...
CBX4                  0.010   chromobox homolog 4 
RAI1                  0.010   retinoic acid induced 1 
LOC284297             0.010   hypothetical protein LOC284297 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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