Guide to the Human Genome
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Name: LRRN1 Sequence: fasta or formatted (716aa) NCBI GI: 153791330
Description:

leucine rich repeat neuronal 1

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         38           2
 C cysteine            2.0         14           1
 D aspartate           5.0         36           1
 E glutamate           5.6         40           2
 F phenylalanine       2.8         20           1
 G glycine             3.1         22           1
 H histidine           2.4         17           2
 I isoleucine          6.4         46           1
 K lysine              5.6         40           2
 L leucine            12.4         89           3
 M methionine          2.9         21           1
 N asparagine          8.1         58           3
 P proline             4.3         31           2
 Q glutamine           4.6         33           2
 R arginine            3.2         23           1
 S serine              8.5         61           2
 T threonine           7.1         51           2
 V valine              6.4         46           1
 W tryptophan          1.1          8           1
 Y tyrosine            3.1         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat neuronal 1 
LRRN3                 0.540   leucine rich repeat neuronal 3 
LRRN3                 0.540   leucine rich repeat neuronal 3 
LRRN3                 0.540   leucine rich repeat neuronal 3 
LRRN2                 0.447   leucine rich repeat neuronal 2 
LRRN2                 0.447   leucine rich repeat neuronal 2 
LINGO2                0.101   leucine rich repeat and Ig domain containing 2 [Homo...
LINGO3                0.099   leucine rich repeat and Ig domain containing 3 [Hom...
LINGO1                0.094   leucine-rich repeat neuronal 6A 
LINGO4                0.091   leucine rich repeat and Ig domain containing 4 [Homo...
LRRC4C                0.079   netrin-G1 ligand 
LRRC70                0.078   synleurin 
LRRC4                 0.075   leucine rich repeat containing 4 
LRIG3                 0.071   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.071   leucine-rich repeats and immunoglobulin-like domain...
LRFN5                 0.069   leucine rich repeat and fibronectin type III domain ...
LGR5                  0.069   leucine-rich repeat-containing G protein-coupled rece...
LRRC4B                0.068   leucine rich repeat containing 4B 
LRIG1                 0.068   leucine-rich repeats and immunoglobulin-like domains...
LRIG2                 0.066   leucine-rich repeats and immunoglobulin-like domains ...
LGR4                  0.066   leucine-rich repeat-containing G protein-coupled re...
PXDN                  0.064   peroxidasin 
CHADL                 0.063   chondroadherin-like 
GP5                   0.062   glycoprotein V (platelet) 
SLIT1                 0.062   slit homolog 1 
LRRTM3                0.061   leucine rich repeat transmembrane neuronal 3 
CPN2                  0.058   carboxypeptidase N, polypeptide 2, 83kD 
IGFALS                0.057   insulin-like growth factor binding protein, acid la...
IGFALS                0.057   insulin-like growth factor binding protein, acid labi...
RXFP1                 0.057   relaxin/insulin-like family peptide receptor 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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