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Search of human proteins with 153266795
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153266795 adenylate cyclase activating polypeptide precursor
[Homo sapiens]
(176 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153266792 adenylate cyclase activating polypeptide precursor ... 355 9e-99
gi|153266795 adenylate cyclase activating polypeptide precursor ... 355 9e-99
gi|4507897 vasoactive intestinal peptide isoform 1 preproprotein... 70 7e-13
gi|37588853 vasoactive intestinal peptide isoform 2 preproprotei... 69 3e-12
gi|11345450 secretin preproprotein [Homo sapiens] 47 1e-05
gi|11034841 growth hormone releasing hormone preproprotein [Homo... 37 0.009
gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo ... 37 0.012
gi|32880203 cadherin-like 24 isoform 2 [Homo sapiens] 33 0.17
gi|32880206 cadherin-like 24 isoform 1 [Homo sapiens] 33 0.17
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 32 0.22
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 32 0.22
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 32 0.22
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 32 0.28
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 31 0.49
gi|24497519 mannosidase, alpha, class 1A, member 1 [Homo sapiens] 31 0.63
gi|4503945 glucagon preproprotein [Homo sapiens] 30 0.83
gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo sap... 30 0.83
gi|18426904 Werner helicase interacting protein isoform 2 [Homo ... 30 0.83
gi|18426902 Werner helicase interacting protein isoform 1 [Homo ... 30 0.83
gi|239787092 A20-binding inhibitor of NF-kappaB activation 2 iso... 30 1.1
gi|21735552 mitogen-activated protein kinase kinase kinase 12 [H... 30 1.1
gi|239757810 PREDICTED: similar to protein phosphatase 1, regula... 30 1.4
gi|225690502 junctophilin 4 [Homo sapiens] 30 1.4
gi|225690500 junctophilin 4 [Homo sapiens] 30 1.4
gi|58761532 protein phosphatase 1, regulatory (inhibitor) subuni... 30 1.4
gi|223468693 hypothetical protein LOC100130361 [Homo sapiens] 29 1.8
gi|223468690 hypothetical protein LOC100132994 [Homo sapiens] 29 1.8
gi|239752714 PREDICTED: hypothetical protein XP_002345351 [Homo ... 29 1.8
gi|239747249 PREDICTED: hypothetical protein [Homo sapiens] 29 1.8
gi|55956921 heterogeneous nuclear ribonucleoprotein A/B isoform ... 29 1.8
>gi|153266792 adenylate cyclase activating polypeptide precursor
[Homo sapiens]
Length = 176
Score = 355 bits (912), Expect = 9e-99
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MTMCSGARLALLVYGIIMHSSVYSSPAAAGLRFPGIRPEEEAYGEDGNPLPDFDGSEPPG 60
MTMCSGARLALLVYGIIMHSSVYSSPAAAGLRFPGIRPEEEAYGEDGNPLPDFDGSEPPG
Sbjct: 1 MTMCSGARLALLVYGIIMHSSVYSSPAAAGLRFPGIRPEEEAYGEDGNPLPDFDGSEPPG 60
Query: 61 AGSPASAPRAAAAWYRPAGRRDVAHGILNEAYRKVLDQLSAGKHLQSLVARGVGGSLGGG 120
AGSPASAPRAAAAWYRPAGRRDVAHGILNEAYRKVLDQLSAGKHLQSLVARGVGGSLGGG
Sbjct: 61 AGSPASAPRAAAAWYRPAGRRDVAHGILNEAYRKVLDQLSAGKHLQSLVARGVGGSLGGG 120
Query: 121 AGDDAEPLSKRHSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNKGRRIAYL 176
AGDDAEPLSKRHSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNKGRRIAYL
Sbjct: 121 AGDDAEPLSKRHSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNKGRRIAYL 176
>gi|153266795 adenylate cyclase activating polypeptide precursor
[Homo sapiens]
Length = 176
Score = 355 bits (912), Expect = 9e-99
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MTMCSGARLALLVYGIIMHSSVYSSPAAAGLRFPGIRPEEEAYGEDGNPLPDFDGSEPPG 60
MTMCSGARLALLVYGIIMHSSVYSSPAAAGLRFPGIRPEEEAYGEDGNPLPDFDGSEPPG
Sbjct: 1 MTMCSGARLALLVYGIIMHSSVYSSPAAAGLRFPGIRPEEEAYGEDGNPLPDFDGSEPPG 60
Query: 61 AGSPASAPRAAAAWYRPAGRRDVAHGILNEAYRKVLDQLSAGKHLQSLVARGVGGSLGGG 120
AGSPASAPRAAAAWYRPAGRRDVAHGILNEAYRKVLDQLSAGKHLQSLVARGVGGSLGGG
Sbjct: 61 AGSPASAPRAAAAWYRPAGRRDVAHGILNEAYRKVLDQLSAGKHLQSLVARGVGGSLGGG 120
Query: 121 AGDDAEPLSKRHSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNKGRRIAYL 176
AGDDAEPLSKRHSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNKGRRIAYL
Sbjct: 121 AGDDAEPLSKRHSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNKGRRIAYL 176
>gi|4507897 vasoactive intestinal peptide isoform 1 preproprotein
[Homo sapiens]
Length = 170
Score = 70.5 bits (171), Expect = 7e-13
Identities = 39/79 (49%), Positives = 55/79 (69%), Gaps = 6/79 (7%)
Query: 84 AHGILNEAYRKVLDQLSAGKHLQSLVARGVGGSLGGGAGDDAEPLSKRHSDGIFTDSYSR 143
A G+ + K+L QLSA K+L+SL+ + V ++ +D P+ KRHSD +FTD+Y+R
Sbjct: 82 ADGVFTSDFSKLLGQLSAKKYLESLMGKRVSSNIS----EDPVPV-KRHSDAVFTDNYTR 136
Query: 144 YRKQMAVKKYLAAVL-GKR 161
RKQMAVKKYL ++L GKR
Sbjct: 137 LRKQMAVKKYLNSILNGKR 155
Score = 40.8 bits (94), Expect = 6e-04
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 131 RHSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRV 166
RH+DG+FT +S+ Q++ KKYL +++GKR +
Sbjct: 80 RHADGVFTSDFSKLLGQLSAKKYLESLMGKRVSSNI 115
>gi|37588853 vasoactive intestinal peptide isoform 2 preproprotein
[Homo sapiens]
Length = 169
Score = 68.6 bits (166), Expect = 3e-12
Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 7/79 (8%)
Query: 84 AHGILNEAYRKVLDQLSAGKHLQSLVARGVGGSLGGGAGDDAEPLSKRHSDGIFTDSYSR 143
A G+ + K+L QLSA K+L+SL+ + V +D P+ KRHSD +FTD+Y+R
Sbjct: 82 ADGVFTSDFSKLLGQLSAKKYLESLMGKRVSN-----ISEDPVPV-KRHSDAVFTDNYTR 135
Query: 144 YRKQMAVKKYLAAVL-GKR 161
RKQMAVKKYL ++L GKR
Sbjct: 136 LRKQMAVKKYLNSILNGKR 154
Score = 40.0 bits (92), Expect = 0.001
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 131 RHSDGIFTDSYSRYRKQMAVKKYLAAVLGKR 161
RH+DG+FT +S+ Q++ KKYL +++GKR
Sbjct: 80 RHADGVFTSDFSKLLGQLSAKKYLESLMGKR 110
>gi|11345450 secretin preproprotein [Homo sapiens]
Length = 121
Score = 46.6 bits (109), Expect = 1e-05
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 117 LGGGAGDDAEPLSKRHSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKN 168
LGG A A P ++RHSDG FT SR R+ +++ L ++GKR +Q +N
Sbjct: 13 LGGSAARPAPPRARRHSDGTFTSELSRLREGARLQRLLQGLVGKRSEQDAEN 64
>gi|11034841 growth hormone releasing hormone preproprotein [Homo
sapiens]
Length = 108
Score = 37.0 bits (84), Expect = 0.009
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 81 RDVAHGILNEAYRKVLDQLSAGKHLQSLVARGVGGSLGGGAGDDAEPLSKRHSDGIFTDS 140
R A I +YRKVL QLSA K LQ +++R G+ + R G DS
Sbjct: 30 RRYADAIFTNSYRKVLGQLSARKLLQDIMSR--------QQGESNQERGARARLGRQVDS 81
Query: 141 YSRYRKQMAVKKYLAAVLGK 160
+KQM ++ L A+L K
Sbjct: 82 MWAEQKQMELESILVALLQK 101
Score = 31.6 bits (70), Expect = 0.37
Identities = 12/43 (27%), Positives = 27/43 (62%)
Query: 130 KRHSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNKGRR 172
+R++D IFT+SY + Q++ +K L ++ ++ + + +G R
Sbjct: 30 RRYADAIFTNSYRKVLGQLSARKLLQDIMSRQQGESNQERGAR 72
>gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo
sapiens]
Length = 756
Score = 36.6 bits (83), Expect = 0.012
Identities = 36/99 (36%), Positives = 42/99 (42%), Gaps = 19/99 (19%)
Query: 30 GLRFPGIRPEEEAYGE--DGNPLPDFDGSEPPGAGSPASAPRAAAAWYRP--AGRRDVAH 85
G R PG P +E G+ G L G PG GS W P A DVA
Sbjct: 573 GWRLPGQAPGQELLGQARPGGGLSSLSGG--PGGGS------GVGRWQLPGRAAAEDVA- 623
Query: 86 GILNEAYRKVLDQLSAGKHL--QSLVARGVGGSLGGGAG 122
EA KVL+ G+ Q L A G+G + GGGAG
Sbjct: 624 ----EAAAKVLEGAGPGRPRRGQLLRAAGLGQARGGGAG 658
>gi|32880203 cadherin-like 24 isoform 2 [Homo sapiens]
Length = 781
Score = 32.7 bits (73), Expect = 0.17
Identities = 46/153 (30%), Positives = 58/153 (37%), Gaps = 31/153 (20%)
Query: 4 CSGARLALLVYGIIMHSSVYSSPAAAGLRFPGIRPEEEAYGEDGN-----------PLPD 52
C GA LAL+V + + A L +R Y ++G L +
Sbjct: 610 CVGALLALVVLFVALRRQ--KQEALMVLEEEDVRENIITYDDEGGGEEDTEAFDITALQN 667
Query: 53 FDGSEPPGAGSPAS---APRAAAAWY-RPAGRRDVAHGI---LNEAYR----------KV 95
DG+ PP G PA PRA + RP G DVA + L EA +V
Sbjct: 668 PDGAAPPAPGPPARRDVLPRARVSRQPRPPGPADVAQLLALRLREADEDPGVPPYDSVQV 727
Query: 96 LDQLSAGKHLQSLVARGVGGSLGGGAGDDAEPL 128
G SL + G GS GGA AEPL
Sbjct: 728 YGYEGRGSSCGSLSSLG-SGSEAGGAPGPAEPL 759
>gi|32880206 cadherin-like 24 isoform 1 [Homo sapiens]
Length = 819
Score = 32.7 bits (73), Expect = 0.17
Identities = 46/153 (30%), Positives = 58/153 (37%), Gaps = 31/153 (20%)
Query: 4 CSGARLALLVYGIIMHSSVYSSPAAAGLRFPGIRPEEEAYGEDGN-----------PLPD 52
C GA LAL+V + + A L +R Y ++G L +
Sbjct: 648 CVGALLALVVLFVALRRQ--KQEALMVLEEEDVRENIITYDDEGGGEEDTEAFDITALQN 705
Query: 53 FDGSEPPGAGSPAS---APRAAAAWY-RPAGRRDVAHGI---LNEAYR----------KV 95
DG+ PP G PA PRA + RP G DVA + L EA +V
Sbjct: 706 PDGAAPPAPGPPARRDVLPRARVSRQPRPPGPADVAQLLALRLREADEDPGVPPYDSVQV 765
Query: 96 LDQLSAGKHLQSLVARGVGGSLGGGAGDDAEPL 128
G SL + G GS GGA AEPL
Sbjct: 766 YGYEGRGSSCGSLSSLG-SGSEAGGAPGPAEPL 797
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 32.3 bits (72), Expect = 0.22
Identities = 30/80 (37%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
Query: 55 GSEPPGAGSPASAPRAAAAWYRPAGRRDVA--HGILNEAYRKVLDQLSAGKHLQSLVARG 112
GS PP A+ AAAA PAG R A H L E + G + S R
Sbjct: 572 GSTPPADSVAAAGAGAAAAGSGPAGSRVPAPHHPHLLEGRK-----AGGGSYHHSSAFRP 626
Query: 113 VGGSLGGGAGDDAEPLSKRH 132
VGG DDAE L+K H
Sbjct: 627 VGGK------DDAESLAKLH 640
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 32.3 bits (72), Expect = 0.22
Identities = 30/80 (37%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
Query: 55 GSEPPGAGSPASAPRAAAAWYRPAGRRDVA--HGILNEAYRKVLDQLSAGKHLQSLVARG 112
GS PP A+ AAAA PAG R A H L E + G + S R
Sbjct: 572 GSTPPADSVAAAGAGAAAAGSGPAGSRVPAPHHPHLLEGRK-----AGGGSYHHSSAFRP 626
Query: 113 VGGSLGGGAGDDAEPLSKRH 132
VGG DDAE L+K H
Sbjct: 627 VGGK------DDAESLAKLH 640
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 32.3 bits (72), Expect = 0.22
Identities = 30/80 (37%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
Query: 55 GSEPPGAGSPASAPRAAAAWYRPAGRRDVA--HGILNEAYRKVLDQLSAGKHLQSLVARG 112
GS PP A+ AAAA PAG R A H L E + G + S R
Sbjct: 572 GSTPPADSVAAAGAGAAAAGSGPAGSRVPAPHHPHLLEGRK-----AGGGSYHHSSAFRP 626
Query: 113 VGGSLGGGAGDDAEPLSKRH 132
VGG DDAE L+K H
Sbjct: 627 VGGK------DDAESLAKLH 640
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 32.0 bits (71), Expect = 0.28
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 38 PEEEAYGEDGNPLPDFDGSEPPGAGSPASAPRAAAAWYRPA---GRRDVAHGILNEAYRK 94
P +E G G P P F +P G AS PR + A GR+D L E +
Sbjct: 205 PAKERAGRGGEPPPLFGKKDPRARGEEASGPRGVVDLTQEARAEGRQDRGPPRLAE---R 261
Query: 95 VLDQLSAGKHLQSLVARGVGGSLGGGAGDDAEP 127
+ L+ K + + V GGAGD P
Sbjct: 262 LSPFLAESKTKNAALQPSVLTMCNGGAGDVGLP 294
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 31.2 bits (69), Expect = 0.49
Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 13/109 (11%)
Query: 21 SVYSSPAAAGLRFPGIRPEEEAYG-EDGNPLPDFDGSEPPGAGSPASAPRAAAAWYRPAG 79
+V S+P A PG E+ G +DG +P G G+P S P A
Sbjct: 2040 TVVSAPGLAPSATPGAPRIEQLDGVDDGTDSEAEAVQQPRGQGTPPSGPGVVRA------ 2093
Query: 80 RRDVAHGILNEAYRKVLDQLSAGKHLQSLVARGVGGSLGGGAGDDAEPL 128
G+L A + + V + +GG GGAG E L
Sbjct: 2094 ------GVLGAAGDRARPPEDLPSEIVDFVLKNLGGPGDGGAGPREESL 2136
>gi|24497519 mannosidase, alpha, class 1A, member 1 [Homo sapiens]
Length = 653
Score = 30.8 bits (68), Expect = 0.63
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
Query: 1 MTMCSGARLAL-----LVYGIIMHSSVYSSPAAAGLRFPGIRPEEEAYG-----EDGNP 49
+T+C GA L L+ G++ HSS PAA PG R E+ A G E+G P
Sbjct: 52 ITLCFGAIFFLPDSSKLLSGVLFHSSPALQPAADHKPGPGARAEDAAEGRARRREEGAP 110
>gi|4503945 glucagon preproprotein [Homo sapiens]
Length = 180
Score = 30.4 bits (67), Expect = 0.83
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 84 AHGILNEAYRKVLDQLSAGKHLQSLVARGVGGSLGGGAGDDAEPLSKRHSDGIFTDSYSR 143
+ G Y K LD A +Q L+ + D+ E RH++G FT S
Sbjct: 54 SQGTFTSDYSKYLDSRRAQDFVQWLMNTKRNRNNIAKRHDEFE----RHAEGTFTSDVSS 109
Query: 144 YRKQMAVKKYLAAVLGKRYKQRVKNKGRR 172
Y + A K+++A + VK +GRR
Sbjct: 110 YLEGQAAKEFIAWL--------VKGRGRR 130
Score = 28.1 bits (61), Expect = 4.1
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 8/32 (25%)
Query: 121 AGDDAEPLS--------KRHSDGIFTDSYSRY 144
+ A+PLS KRHS G FT YS+Y
Sbjct: 34 SASQADPLSDPDQMNEDKRHSQGTFTSDYSKY 65
>gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo
sapiens]
Length = 1258
Score = 30.4 bits (67), Expect = 0.83
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Query: 44 GEDGNP-LPDFDGSE----PPGAGSPASAPR---AAAAWYRPAGRRDVAHGILNEAYRKV 95
GED P LP GS P G SP AP A AA P G V+H L +Y
Sbjct: 134 GEDEKPPLPPRSGSTSISAPTGPSSPLPAPETPTAPAAESAPNGLSTVSHDYLKGSYGLD 193
Query: 96 LDQLSAG-KHLQSL 108
L+ + G HL L
Sbjct: 194 LEAVRGGASHLPHL 207
>gi|18426904 Werner helicase interacting protein isoform 2 [Homo
sapiens]
Length = 640
Score = 30.4 bits (67), Expect = 0.83
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 24 SSPAAAGLRFPG------IRPEEEAYGE-DGNPLPDFDGSEPPGAGSPASAPRAAAAWYR 76
++ AAAG P + EEEA G+ DG+ D DG + PG A A AA A+
Sbjct: 144 AAAAAAGSASPRSWDEAEAQEEEEAVGDGDGDGDADADGEDDPGHWD-ADAAEAATAFGA 202
Query: 77 PAGRRDVAHGILNEAYRKVL 96
G R + E R++L
Sbjct: 203 SGGGRPHPRALAAEEIRQML 222
>gi|18426902 Werner helicase interacting protein isoform 1 [Homo
sapiens]
Length = 665
Score = 30.4 bits (67), Expect = 0.83
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 24 SSPAAAGLRFPG------IRPEEEAYGE-DGNPLPDFDGSEPPGAGSPASAPRAAAAWYR 76
++ AAAG P + EEEA G+ DG+ D DG + PG A A AA A+
Sbjct: 144 AAAAAAGSASPRSWDEAEAQEEEEAVGDGDGDGDADADGEDDPGHWD-ADAAEAATAFGA 202
Query: 77 PAGRRDVAHGILNEAYRKVL 96
G R + E R++L
Sbjct: 203 SGGGRPHPRALAAEEIRQML 222
>gi|239787092 A20-binding inhibitor of NF-kappaB activation 2
isoform 1 [Homo sapiens]
Length = 429
Score = 30.0 bits (66), Expect = 1.1
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 27/129 (20%)
Query: 56 SEPPGAGSPASAPRAAAA---WYRPAGRRDVAHGILNEAYRKVLDQLSAGKHLQSLVARG 112
S PG+G APRAAAA Y AG+R R++ DQL+A +L+AR
Sbjct: 2 SRDPGSGGWEEAPRAAAALCTLYHEAGQR----------LRRLQDQLAA---RDALIAR- 47
Query: 113 VGGSLGGGAGDDAEPLSKRHSDGIFTDSYSRYRKQMAVKKYLAAVLG-----KRYKQRVK 167
+ L GD A L + +R+R+Q+ ++ AA +R +R++
Sbjct: 48 LRARLAALEGDAAPSLV-----DALLEQVARFREQLRRQEGGAAEAQMRQEIERLTERLE 102
Query: 168 NKGRRIAYL 176
K R + L
Sbjct: 103 EKEREMQQL 111
>gi|21735552 mitogen-activated protein kinase kinase kinase 12 [Homo
sapiens]
Length = 859
Score = 30.0 bits (66), Expect = 1.1
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 57 EPPGAGSPASAPRAAAAWYR-PAGRRDVAHG-ILNEAYRKVLDQLSAGKHLQSLVARGVG 114
EP G GSP +AW P R + H +L + D LSA +L +RG G
Sbjct: 570 EPGGPGSPGGLGGGPSAWEACPPALRGLHHDLLLRKMSSSSPDLLSA-----ALGSRGRG 624
Query: 115 GSLGGGAGDDAEP 127
+ GGAGD P
Sbjct: 625 AT--GGAGDPGSP 635
>gi|239757810 PREDICTED: similar to protein phosphatase 1,
regulatory (inhibitor) subunit 3F [Homo sapiens]
Length = 724
Score = 29.6 bits (65), Expect = 1.4
Identities = 39/132 (29%), Positives = 48/132 (36%), Gaps = 16/132 (12%)
Query: 24 SSPAAAG---LRFPGIR--PEEEAYGEDGNPLPDFDGSEPP-GAGSPASAP---RAAAAW 74
SSP A L+ P IR P G G+P G + GA P P +A A W
Sbjct: 400 SSPPVAFTEVLQAPAIRIPPSSPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEATW 459
Query: 75 ---YRPAGRRDVAHGILNEAYRKVLDQLSAGKHLQSL----VARGVGGSLGGGAGDDAEP 127
G + G +DQ +L L A GG+ GGG G
Sbjct: 460 GVSSENGGGLEAVSGSEELLGEDTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGSTDGG 519
Query: 128 LSKRHSDGIFTD 139
+S H GI TD
Sbjct: 520 MSPSHPLGILTD 531
>gi|225690502 junctophilin 4 [Homo sapiens]
Length = 628
Score = 29.6 bits (65), Expect = 1.4
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 31 LRFPGIRPEEEAYGEDGNPLPD-----FDGSEPPGAGSP--ASAPRAAAAWYRPAGRR 81
L PG RP +++ G D PL + ++ P GSP S+P ++ +RP R
Sbjct: 420 LEAPGRRPRQDSEGSDTEPLDEDSPGVYENGLTPSEGSPELPSSPASSRQPWRPPACR 477
>gi|225690500 junctophilin 4 [Homo sapiens]
Length = 628
Score = 29.6 bits (65), Expect = 1.4
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 31 LRFPGIRPEEEAYGEDGNPLPD-----FDGSEPPGAGSP--ASAPRAAAAWYRPAGRR 81
L PG RP +++ G D PL + ++ P GSP S+P ++ +RP R
Sbjct: 420 LEAPGRRPRQDSEGSDTEPLDEDSPGVYENGLTPSEGSPELPSSPASSRQPWRPPACR 477
>gi|58761532 protein phosphatase 1, regulatory (inhibitor) subunit
3F [Homo sapiens]
Length = 799
Score = 29.6 bits (65), Expect = 1.4
Identities = 39/132 (29%), Positives = 48/132 (36%), Gaps = 16/132 (12%)
Query: 24 SSPAAAG---LRFPGIR--PEEEAYGEDGNPLPDFDGSEPP-GAGSPASAP---RAAAAW 74
SSP A L+ P IR P G G+P G + GA P P +A A W
Sbjct: 400 SSPPVAFTEVLQAPAIRIPPSSPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEATW 459
Query: 75 ---YRPAGRRDVAHGILNEAYRKVLDQLSAGKHLQSL----VARGVGGSLGGGAGDDAEP 127
G + G +DQ +L L A GG+ GGG G
Sbjct: 460 GVSSENGGGLEAVSGSEELLGEDTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGSTDGG 519
Query: 128 LSKRHSDGIFTD 139
+S H GI TD
Sbjct: 520 MSPSHPLGILTD 531
>gi|223468693 hypothetical protein LOC100130361 [Homo sapiens]
Length = 514
Score = 29.3 bits (64), Expect = 1.8
Identities = 16/58 (27%), Positives = 23/58 (39%)
Query: 24 SSPAAAGLRFPGIRPEEEAYGEDGNPLPDFDGSEPPGAGSPASAPRAAAAWYRPAGRR 81
+S A G FP A + P F G P G P+ ++ +PAGR+
Sbjct: 328 ASQLALGRGFPACGERLSAAPPEPATFPPFSGVRPQGMSKKPQKPKHSSPGKKPAGRK 385
>gi|223468690 hypothetical protein LOC100132994 [Homo sapiens]
Length = 514
Score = 29.3 bits (64), Expect = 1.8
Identities = 16/58 (27%), Positives = 23/58 (39%)
Query: 24 SSPAAAGLRFPGIRPEEEAYGEDGNPLPDFDGSEPPGAGSPASAPRAAAAWYRPAGRR 81
+S A G FP A + P F G P G P+ ++ +PAGR+
Sbjct: 328 ASQLALGRGFPACGERLSAAPPEPATFPPFSGVRPQGMSKKPQKPKHSSPGKKPAGRK 385
>gi|239752714 PREDICTED: hypothetical protein XP_002345351 [Homo
sapiens]
Length = 202
Score = 29.3 bits (64), Expect = 1.8
Identities = 19/34 (55%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 53 FDGSEPPGAGSPASAPR-AAAAW--YRPAGRRDV 83
F GS PP AGS AS P A AW R AGR V
Sbjct: 157 FRGSPPPPAGSSASLPHFPATAWGLCRLAGRESV 190
>gi|239747249 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 29.3 bits (64), Expect = 1.8
Identities = 19/34 (55%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 53 FDGSEPPGAGSPASAPR-AAAAW--YRPAGRRDV 83
F GS PP AGS AS P A AW R AGR V
Sbjct: 157 FRGSPPPPAGSSASLPHFPATAWGLCRLAGRESV 190
>gi|55956921 heterogeneous nuclear ribonucleoprotein A/B isoform b
[Homo sapiens]
Length = 285
Score = 29.3 bits (64), Expect = 1.8
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
Query: 54 DGSEPPGAGSPASAPRAAAAWYRPAGRRDVAHGILNEAYRKVLDQLSAGKHLQSLVARGV 113
+G P GAG+ A+A A P+G ++ A G DQ++A K+ + V
Sbjct: 25 EGESPAGAGTGAAAGAGGATAAPPSGNQNGAEG----------DQINASKNEEDAGKMFV 74
Query: 114 GG 115
GG
Sbjct: 75 GG 76
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,883,508
Number of Sequences: 37866
Number of extensions: 444156
Number of successful extensions: 2391
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 2339
Number of HSP's gapped (non-prelim): 143
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.