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Search of human proteins with 15193294
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15193294 Mof4 family associated protein 1 [Homo sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15193294 Mof4 family associated protein 1 [Homo sapiens] 247 2e-66
gi|44921608 Morf4 family associated protein 1-like 1 [Homo sapiens] 209 5e-55
gi|41406057 amyloid beta A4 protein isoform c precursor [Homo sa... 34 0.035
gi|209915570 amyloid beta A4 protein isoform e precursor [Homo s... 34 0.035
gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens] 32 0.17
gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens] 32 0.17
gi|51477690 tripartite motif-containing 6 and tripartite motif-c... 32 0.17
gi|160420295 hypothetical protein LOC85459 [Homo sapiens] 32 0.17
gi|21450705 leucine rich repeat containing 45 [Homo sapiens] 31 0.29
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 30 0.38
gi|126723390 ankyrin repeat domain 24 [Homo sapiens] 30 0.38
gi|82880656 coiled-coil domain containing 46 isoform a [Homo sap... 30 0.50
gi|157694505 LINE-1 type transposase domain containing 1 [Homo s... 30 0.65
gi|130980075 centromere protein J [Homo sapiens] 29 0.85
gi|122937219 F-box protein 41 [Homo sapiens] 29 0.85
gi|157502225 Janus kinase and microtubule interacting protein 3 ... 29 1.1
gi|239755818 PREDICTED: hypothetical protein isoform 2 [Homo sap... 29 1.1
gi|239755816 PREDICTED: hypothetical protein isoform 1 [Homo sap... 29 1.1
gi|239755814 PREDICTED: hypothetical protein isoform 3 [Homo sap... 29 1.1
gi|157738615 coiled-coil alpha-helical rod protein 1 isoform 1 [... 29 1.1
gi|157738613 coiled-coil alpha-helical rod protein 1 isoform 2 [... 29 1.1
gi|157738611 coiled-coil alpha-helical rod protein 1 isoform 3 [... 29 1.1
gi|14318422 keratin 86 [Homo sapiens] 29 1.1
gi|7706254 NOP58 ribonucleoprotein homolog [Homo sapiens] 29 1.1
gi|169790853 keratin, hair, basic, 1 [Homo sapiens] 29 1.1
gi|169790841 keratin 83 [Homo sapiens] 29 1.1
gi|4504919 keratin 8 [Homo sapiens] 28 1.5
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 28 1.5
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 28 1.5
gi|145309326 laminin, gamma 1 precursor [Homo sapiens] 28 1.9
>gi|15193294 Mof4 family associated protein 1 [Homo sapiens]
Length = 127
Score = 247 bits (631), Expect = 2e-66
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MRPLDIVELAEPEEVEVLEPEEDFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEM 60
MRPLDIVELAEPEEVEVLEPEEDFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEM
Sbjct: 1 MRPLDIVELAEPEEVEVLEPEEDFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEM 60
Query: 61 DNMLIQIKTQVEASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVELVRR 120
DNMLIQIKTQVEASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVELVRR
Sbjct: 61 DNMLIQIKTQVEASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVELVRR 120
Query: 121 IEKSESS 127
IEKSESS
Sbjct: 121 IEKSESS 127
>gi|44921608 Morf4 family associated protein 1-like 1 [Homo sapiens]
Length = 127
Score = 209 bits (532), Expect = 5e-55
Identities = 108/127 (85%), Positives = 115/127 (90%)
Query: 1 MRPLDIVELAEPEEVEVLEPEEDFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEM 60
MRPLDI E+ PEEVEVLEPEEDFEQFLLPVINEMREDIASL REHGRAYLR RSKLWEM
Sbjct: 1 MRPLDIDEVEAPEEVEVLEPEEDFEQFLLPVINEMREDIASLIREHGRAYLRTRSKLWEM 60
Query: 61 DNMLIQIKTQVEASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVELVRR 120
DNMLIQIKTQVEASEESALNH+Q+P A+ R ++ CEKAEEKAKEIAKMAEMLVELV R
Sbjct: 61 DNMLIQIKTQVEASEESALNHVQHPSGEADERVSELCEKAEEKAKEIAKMAEMLVELVWR 120
Query: 121 IEKSESS 127
IE+SESS
Sbjct: 121 IERSESS 127
>gi|41406057 amyloid beta A4 protein isoform c precursor [Homo
sapiens]
Length = 695
Score = 33.9 bits (76), Expect = 0.035
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 6 IVELAEPEEVEVLEPEE---DFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMDN 62
+VE+AE EEV +E EE D + + E E+ E + + E
Sbjct: 225 VVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVE 284
Query: 63 MLIQIKTQVEASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVELVRRIE 122
++++ T ++ ++ +L+ PGD E +KA+E+ + AK E + +++R E
Sbjct: 285 EVVRVPTTAASTPDAVDKYLETPGDENE---HAHFQKAKERLE--AKHRERMSQVMREWE 339
Query: 123 KSE 125
++E
Sbjct: 340 EAE 342
>gi|209915570 amyloid beta A4 protein isoform e precursor [Homo
sapiens]
Length = 639
Score = 33.9 bits (76), Expect = 0.035
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 6 IVELAEPEEVEVLEPEE---DFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMDN 62
+VE+AE EEV +E EE D + + E E+ E + + E
Sbjct: 169 VVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVE 228
Query: 63 MLIQIKTQVEASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVELVRRIE 122
++++ T ++ ++ +L+ PGD E +KA+E+ + AK E + +++R E
Sbjct: 229 EVVRVPTTAASTPDAVDKYLETPGDENE---HAHFQKAKERLE--AKHRERMSQVMREWE 283
Query: 123 KSE 125
++E
Sbjct: 284 EAE 286
>gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]
Length = 488
Score = 31.6 bits (70), Expect = 0.17
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 19 EPEEDFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEASEESA 78
E +E F++ L + NE +E E A++R + W+ + + Q E
Sbjct: 139 EYQEKFQESLKKLKNEEQE------AEKLTAFIREKKTSWKNQMEPERCRIQTE------ 186
Query: 79 LNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAE 112
N L+N D E R K+ E+ E+K I + AE
Sbjct: 187 FNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAE 220
>gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]
Length = 516
Score = 31.6 bits (70), Expect = 0.17
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 19 EPEEDFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEASEESA 78
E +E F++ L + NE +E E A++R + W+ + + Q E
Sbjct: 167 EYQEKFQESLKKLKNEEQE------AEKLTAFIREKKTSWKNQMEPERCRIQTE------ 214
Query: 79 LNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAE 112
N L+N D E R K+ E+ E+K I + AE
Sbjct: 215 FNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAE 248
>gi|51477690 tripartite motif-containing 6 and tripartite
motif-containing 34 [Homo sapiens]
Length = 842
Score = 31.6 bits (70), Expect = 0.17
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 19 EPEEDFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEASEESA 78
E +E F++ L + NE +E E A++R + W+ + + Q E
Sbjct: 167 EYQEKFQESLKKLKNEEQE------AEKLTAFIREKKTSWKNQMEPERCRIQTE------ 214
Query: 79 LNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAE 112
N L+N D E R K+ E+ E+K I + AE
Sbjct: 215 FNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAE 248
>gi|160420295 hypothetical protein LOC85459 [Homo sapiens]
Length = 2601
Score = 31.6 bits (70), Expect = 0.17
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 2 RPLDIVELAEPEEVEVLEPEEDFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMD 61
R L ++++ E E L+ ED +Q + E++ + E ++N KL+
Sbjct: 30 RKLRLLQVREQERDIALQIREDIKQRRNQQFTRLAEELRAEWEESQTQKIQNLEKLY--- 86
Query: 62 NMLIQIKTQVEASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVELV 118
L +++ E ++ N + DA RAA+R KA+ + KE K+ + E++
Sbjct: 87 --LASLRSMGEGHRQAKEN--EPDLDALAQRAAERKRKADLRHKEALKVQKNQKEIL 139
>gi|21450705 leucine rich repeat containing 45 [Homo sapiens]
Length = 670
Score = 30.8 bits (68), Expect = 0.29
Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 13/128 (10%)
Query: 9 LAEPEEVEVLEPE------EDFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMDN 62
L + E + + E E E+ E+ + + + SL E R S+ + +
Sbjct: 426 LEDSESLRIKEVEHMTRHLEESEKAMQERVQRLEAARLSLEEELSRVKAAALSERGQAEE 485
Query: 63 MLIQIKTQVEASEESALNHLQN-------PGDAAEGRAAKRCEKAEEKAKEIAKMAEMLV 115
LI+ K+Q E+ L HL++ D A+G ++ + E ++++ +
Sbjct: 486 ELIKAKSQARLEEQQRLAHLEDKLRLLAQARDEAQGACLQQKQVVAEAQTRVSQLGLQVE 545
Query: 116 ELVRRIEK 123
L RR+E+
Sbjct: 546 GLRRRLEE 553
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 30.4 bits (67), Expect = 0.38
Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
Query: 22 EDFEQFLLPVINEMREDIASLTREH-------GRAYLRNRSKLWEMDNMLIQIK------ 68
+D Q L +EM + + SLT+ + + + + L E +NM++Q++
Sbjct: 864 QDLMQQLEKQNSEMEQKVKSLTQVYESKLEDGNKEQEQTKQILVEKENMILQMREGQKKE 923
Query: 69 ----TQVEASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAK-MAEMLVELVRRIEK 123
TQ +++E +++ L + K+ EK ++KAKE+ + + + L++ +++K
Sbjct: 924 IEILTQKLSAKEDSIHILNEEYETKFKNQEKKMEKVKQKAKEMQETLKKKLLDQEAKLKK 983
>gi|126723390 ankyrin repeat domain 24 [Homo sapiens]
Length = 1146
Score = 30.4 bits (67), Expect = 0.38
Identities = 21/109 (19%), Positives = 57/109 (52%), Gaps = 12/109 (11%)
Query: 31 VINEMREDIASLT---REHGRAYLRNRSKLWEMDNMLIQIKTQVEASE------ESALNH 81
++ ++ ++A L E GR + + ++++++ + +K++ A+E E L
Sbjct: 970 IVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRG 1029
Query: 82 LQNPGDAA---EGRAAKRCEKAEEKAKEIAKMAEMLVELVRRIEKSESS 127
L+ + A + RA + +KA+EK K+I ++++ + L +++ ++
Sbjct: 1030 LRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAA 1078
>gi|82880656 coiled-coil domain containing 46 isoform a [Homo
sapiens]
Length = 955
Score = 30.0 bits (66), Expect = 0.50
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 25/122 (20%)
Query: 23 DFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEAS-------- 74
D+EQ + + + DI L +EH + + S + E++ + Q+K Q++ S
Sbjct: 472 DYEQNMKLLQTKYDADINLLKQEHALSASKASSMIEELEQNVCQLKQQLQESELQRKQQL 531
Query: 75 ---------EESALNH--------LQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVEL 117
E+S L H LQ+ D + K+ K EE KE + + E+
Sbjct: 532 RDQENKFQMEKSHLKHIYEKKAHDLQSELDKGKEDTQKKIHKFEEALKEKEEQLTRVTEV 591
Query: 118 VR 119
R
Sbjct: 592 QR 593
>gi|157694505 LINE-1 type transposase domain containing 1 [Homo
sapiens]
Length = 865
Score = 29.6 bits (65), Expect = 0.65
Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 23/126 (18%)
Query: 2 RPLDIVELAEPEEVEVLEPEEDFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMD 61
R L EL E E EE+ ++ I E++E+I +L H S + E++
Sbjct: 595 RTLHTEELTSKEADLTEETEENLRSSVINSIREIKEEIGNLKSSH--------SGVLEIE 646
Query: 62 NMLIQIKTQVEASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVELVRRI 121
N + + ++++ EE D+ E ++ EE +K+ +M + ++ R+
Sbjct: 647 NSVDDLSSRMDILEERI--------DSLE-------DQIEEFSKDTMQMTKQIISKERQR 691
Query: 122 EKSESS 127
+ E S
Sbjct: 692 DIEERS 697
>gi|130980075 centromere protein J [Homo sapiens]
Length = 1338
Score = 29.3 bits (64), Expect = 0.85
Identities = 18/63 (28%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 64 LIQIKTQVEA--SEESALNHLQNPGDAAEGRAAKRCEKAEE-KAKEIAKMAEMLVELVRR 120
+I+++T++E +E ++L L+ ++A + K E+ KAKE+A++ E E +R+
Sbjct: 910 IIELETEIEKFKAENASLAKLRIERESALEKLRKEIADFEQQKAKELARIEEFKKEEMRK 969
Query: 121 IEK 123
++K
Sbjct: 970 LQK 972
>gi|122937219 F-box protein 41 [Homo sapiens]
Length = 936
Score = 29.3 bits (64), Expect = 0.85
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 40 ASLTREHGRAYLRNRS-KLWEMDNMLIQIKTQVEASEESALNHLQNPGD--AAE------ 90
A + E G A L+ R+ + E+D L ++ +VE + LQ + AAE
Sbjct: 255 ADVAYEEGLARLKIRALEKLEVDRRLERLSEEVEQKIAGQVGRLQAELERKAAELETARQ 314
Query: 91 --GRAAKRCEKAEEKAKEIAKMAEMLVELVRRIEK 123
R + E+ EE+A E+++ ++ VEL+ +++
Sbjct: 315 ESARLGREKEELEERASELSRQVDVSVELLASLKQ 349
>gi|157502225 Janus kinase and microtubule interacting protein 3
[Homo sapiens]
Length = 844
Score = 28.9 bits (63), Expect = 1.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 6 IVELAEPEEVEVLEPEEDFEQFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMDNMLI 65
+ EL EE E L+ EQ+ V++E+RE A + RE + ++ E++ +
Sbjct: 759 VAELLSEEEREKLKVA--VEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIE 816
Query: 66 QIKTQVEASEESAL 79
K Q++ EE L
Sbjct: 817 AQKRQIKELEEKFL 830
>gi|239755818 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 486
Score = 28.9 bits (63), Expect = 1.1
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 37 EDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEASE------ESALNHLQNPGDAAE 90
E++ + HG R + ++ E++ M+ ++ +VE ++ E+A+ + G+AA
Sbjct: 302 EEMKATVIRHGETLRRTKEEINELNRMIQRLTAEVENAKCQNSKLEAAVAQSEQQGEAAL 361
Query: 91 GRAAKRCEKAE-----EKAKE 106
A RC+ AE +KAK+
Sbjct: 362 SDA--RCKLAELEGALQKAKQ 380
>gi|239755816 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 486
Score = 28.9 bits (63), Expect = 1.1
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 37 EDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEASE------ESALNHLQNPGDAAE 90
E++ + HG R + ++ E++ M+ ++ +VE ++ E+A+ + G+AA
Sbjct: 302 EEMKATVIRHGETLRRTKEEINELNRMIQRLTAEVENAKCQNSKLEAAVAQSEQQGEAAL 361
Query: 91 GRAAKRCEKAE-----EKAKE 106
A RC+ AE +KAK+
Sbjct: 362 SDA--RCKLAELEGALQKAKQ 380
>gi|239755814 PREDICTED: hypothetical protein isoform 3 [Homo
sapiens]
Length = 486
Score = 28.9 bits (63), Expect = 1.1
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 37 EDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEASE------ESALNHLQNPGDAAE 90
E++ + HG R + ++ E++ M+ ++ +VE ++ E+A+ + G+AA
Sbjct: 302 EEMKATVIRHGETLRRTKEEINELNRMIQRLTAEVENAKCQNSKLEAAVAQSEQQGEAAL 361
Query: 91 GRAAKRCEKAE-----EKAKE 106
A RC+ AE +KAK+
Sbjct: 362 SDA--RCKLAELEGALQKAKQ 380
>gi|157738615 coiled-coil alpha-helical rod protein 1 isoform 1
[Homo sapiens]
Length = 871
Score = 28.9 bits (63), Expect = 1.1
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 26 QFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEASEESALNHLQNP 85
Q LL + ++ED SL H A E+ + +Q T + A +E L P
Sbjct: 360 QKLLETMQHLQEDRDSL---HATA---------ELLQVRVQSLTHILALQEEELTRKVQP 407
Query: 86 GDAAEGRAAKRCEKAEEKAKEIAKMAEMLVEL-VRRIEKSES 126
D+ E ++C+ + +E K+ ++V+L + +E S+S
Sbjct: 408 SDSLEPEFTRKCQSLLNRWRE--KVFALMVQLKAQELEHSDS 447
>gi|157738613 coiled-coil alpha-helical rod protein 1 isoform 2
[Homo sapiens]
Length = 835
Score = 28.9 bits (63), Expect = 1.1
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 26 QFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEASEESALNHLQNP 85
Q LL + ++ED SL H A E+ + +Q T + A +E L P
Sbjct: 324 QKLLETMQHLQEDRDSL---HATA---------ELLQVRVQSLTHILALQEEELTRKVQP 371
Query: 86 GDAAEGRAAKRCEKAEEKAKEIAKMAEMLVEL-VRRIEKSES 126
D+ E ++C+ + +E K+ ++V+L + +E S+S
Sbjct: 372 SDSLEPEFTRKCQSLLNRWRE--KVFALMVQLKAQELEHSDS 411
>gi|157738611 coiled-coil alpha-helical rod protein 1 isoform 3
[Homo sapiens]
Length = 782
Score = 28.9 bits (63), Expect = 1.1
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 26 QFLLPVINEMREDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEASEESALNHLQNP 85
Q LL + ++ED SL H A E+ + +Q T + A +E L P
Sbjct: 271 QKLLETMQHLQEDRDSL---HATA---------ELLQVRVQSLTHILALQEEELTRKVQP 318
Query: 86 GDAAEGRAAKRCEKAEEKAKEIAKMAEMLVEL-VRRIEKSES 126
D+ E ++C+ + +E K+ ++V+L + +E S+S
Sbjct: 319 SDSLEPEFTRKCQSLLNRWRE--KVFALMVQLKAQELEHSDS 358
>gi|14318422 keratin 86 [Homo sapiens]
Length = 486
Score = 28.9 bits (63), Expect = 1.1
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 37 EDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEASE------ESALNHLQNPGDAAE 90
E++ + HG R + ++ E++ M+ ++ +VE ++ E+A+ + G+AA
Sbjct: 302 EEMKATVIRHGETLRRTKEEINELNRMIQRLTAEVENAKCQNSKLEAAVAQSEQQGEAAL 361
Query: 91 GRAAKRCEKAE-----EKAKE 106
A RC+ AE +KAK+
Sbjct: 362 SDA--RCKLAELEGALQKAKQ 380
>gi|7706254 NOP58 ribonucleoprotein homolog [Homo sapiens]
Length = 529
Score = 28.9 bits (63), Expect = 1.1
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 53 NRSKLWEMDNMLIQIKTQVEASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAE 112
N KL E+D++ + +T +A++ L H + D AE AA + K++ K+ +
Sbjct: 18 NEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLK 77
Query: 113 MLVE 116
+V+
Sbjct: 78 KIVK 81
>gi|169790853 keratin, hair, basic, 1 [Homo sapiens]
Length = 505
Score = 28.9 bits (63), Expect = 1.1
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 37 EDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEASE------ESALNHLQNPGDAAE 90
E++ + HG R + ++ E++ M+ ++ +VE ++ E+A+ + G+AA
Sbjct: 302 EEMKATVIRHGETLRRTKEEINELNRMIQRLTAEVENAKCQNSKLEAAVAQSEQQGEAAL 361
Query: 91 GRAAKRCEKAE-----EKAKE 106
A RC+ AE +KAK+
Sbjct: 362 SDA--RCKLAELEGALQKAKQ 380
>gi|169790841 keratin 83 [Homo sapiens]
Length = 493
Score = 28.9 bits (63), Expect = 1.1
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 37 EDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVEASE------ESALNHLQNPGDAAE 90
E++ + HG R + ++ E++ M+ ++ +VE ++ E+A+ + G+AA
Sbjct: 307 EEMKATVIRHGETLRRTKEEINELNRMIQRLTAEVENAKCQNSKLEAAVAQSEQQGEAAL 366
Query: 91 GRAAKRCEKAE-----EKAKE 106
A RC+ AE +KAK+
Sbjct: 367 SDA--RCKLAELEGALQKAKQ 385
>gi|4504919 keratin 8 [Homo sapiens]
Length = 483
Score = 28.5 bits (62), Expect = 1.5
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 37 EDIASLTREHGRAYLRNRSKLWEMDNMLIQIKTQVE------ASEESALNHLQNPGDAA- 89
E++ SL +HG R ++++ EM+ + +++ ++E AS E+A+ + G+ A
Sbjct: 287 EELQSLAGKHGDDLRRTKTEISEMNRNISRLQAEIEGLKGQRASLEAAIADAEQRGELAI 346
Query: 90 --EGRAAKRCEKAEEKAKEIAKMAEMLVE 116
E A ++AK+ MA L E
Sbjct: 347 KDANAKLSELEAALQRAKQ--DMARQLRE 373
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 28.5 bits (62), Expect = 1.5
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 72 EASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVEL-VRRIEKSES 126
E +E + G+ AE AK +K EEK++E+A E++ + V + EK++S
Sbjct: 563 EGEQEEGETEAEAEGEEAE---AKEEKKVEEKSEEVATKEELVADAKVEKPEKAKS 615
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 28.5 bits (62), Expect = 1.5
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 72 EASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVEL-VRRIEKSES 126
E +E + G+ AE AK +K EEK++E+A E++ + V + EK++S
Sbjct: 187 EGEQEEGETEAEAEGEEAE---AKEEKKVEEKSEEVATKEELVADAKVEKPEKAKS 239
>gi|145309326 laminin, gamma 1 precursor [Homo sapiens]
Length = 1609
Score = 28.1 bits (61), Expect = 1.9
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 1 MRPLDIVELAEPEEVEVLEPEEDFEQFL---LPVINEMREDIASLTREHGRAYLRNRSKL 57
+ PLD E E E + E+ EQ + L ++RED+ R K
Sbjct: 1274 LSPLDS-ETLENEANNIKMEAENLEQLIDQKLKDYEDLREDM--------------RGKE 1318
Query: 58 WEMDNMLIQIKTQVEASEESALNHLQNPGDAAEGRAAKRCEKAEEKAKEIAKMAEMLVEL 117
E+ N+L + KT+ + +++ L DAA+ A + +K + +E + L +
Sbjct: 1319 LEVKNLLEKGKTEQQTADQ-----LLARADAAKALAEEAAKKGRDTLQEANDILNNLKDF 1373
Query: 118 VRRIEKSESS 127
RR+ ++++
Sbjct: 1374 DRRVNDNKTA 1383
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,264,296
Number of Sequences: 37866
Number of extensions: 152598
Number of successful extensions: 763
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 733
Number of HSP's gapped (non-prelim): 101
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.