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Search of human proteins with 149408115
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149408115 unkempt homolog (Drosophila)-like isoform 1 [Homo
sapiens]
(232 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149408115 unkempt homolog (Drosophila)-like isoform 1 [Homo s... 477 e-135
gi|122937239 zinc finger CCCH-type domain containing 5 [Homo sap... 186 2e-47
gi|191252814 RIMS binding protein 3B [Homo sapiens] 47 1e-05
gi|191252806 RIMS binding protein 3C [Homo sapiens] 47 1e-05
gi|153792195 DKFZP434H0735 protein [Homo sapiens] 47 1e-05
gi|122937219 F-box protein 41 [Homo sapiens] 45 5e-05
gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap... 43 3e-04
gi|18490978 intermediate filament family orphan isoform 2 [Homo ... 42 6e-04
gi|89213250 intermediate filament family orphan isoform 4 [Homo ... 42 6e-04
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 41 8e-04
gi|5729765 cell growth regulator with ring finger domain 1 [Homo... 40 0.001
gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens] 40 0.002
gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens] 40 0.002
gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens] 40 0.002
gi|38788243 myosin regulatory light chain interacting protein [H... 40 0.002
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 40 0.002
gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo s... 39 0.004
gi|21264330 mindbomb homolog 2 [Homo sapiens] 39 0.004
gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo sa... 39 0.005
gi|30348954 mindbomb homolog 1 [Homo sapiens] 39 0.005
gi|147902746 MEX3A protein [Homo sapiens] 39 0.005
gi|39930383 BarH-like homeobox 2 [Homo sapiens] 38 0.006
gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens] 38 0.008
gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens] 38 0.008
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 38 0.008
gi|226495417 coiled-coil domain containing 102A [Homo sapiens] 37 0.011
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 37 0.011
gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa... 37 0.011
gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap... 37 0.011
gi|28329422 acute myelogenous leukemia 1 translocation 1 protein... 37 0.011
>gi|149408115 unkempt homolog (Drosophila)-like isoform 1 [Homo
sapiens]
Length = 232
Score = 477 bits (1227), Expect = e-135
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 1 MTPPQQPPPLRSEPGTLGSAASSYSPLGLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSS 60
MTPPQQPPPLRSEPGTLGSAASSYSPLGLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSS
Sbjct: 1 MTPPQQPPPLRSEPGTLGSAASSYSPLGLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSS 60
Query: 61 SASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQL 120
SASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQL
Sbjct: 61 SASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQL 120
Query: 121 ALQKKEEVEAQVKQLQEELEGLGVASTLPGLRGCGDIGTIPLPKLHSLQSQLRLDLEAVD 180
ALQKKEEVEAQVKQLQEELEGLGVASTLPGLRGCGDIGTIPLPKLHSLQSQLRLDLEAVD
Sbjct: 121 ALQKKEEVEAQVKQLQEELEGLGVASTLPGLRGCGDIGTIPLPKLHSLQSQLRLDLEAVD 180
Query: 181 GVIFQLRAKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCKGQPLQW 232
GVIFQLRAKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCKGQPLQW
Sbjct: 181 GVIFQLRAKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCKGQPLQW 232
>gi|122937239 zinc finger CCCH-type domain containing 5 [Homo
sapiens]
Length = 886
Score = 186 bits (471), Expect = 2e-47
Identities = 101/217 (46%), Positives = 138/217 (63%), Gaps = 13/217 (5%)
Query: 11 RSEPGTLGSAASSYSPLGLNGVPGSIWD-FVSGSFSPSPSPILSAGPPSSSSASPNGAEL 69
+SE LG++AS + LGLNG+ SIW+ F SGSFSP SP +G P AEL
Sbjct: 673 QSENTFLGTSAS-HGSLGLNGMNSSIWEHFASGSFSPGTSPAFLSG--------PGAAEL 723
Query: 70 ARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVE 129
AR+R++LDEA I+QWEESW+Q KQ CDAW++EA+EA ERA A ++ +LA ++++ +E
Sbjct: 724 ARLRQELDEANSTIKQWEESWKQAKQACDAWKKEAEEAGERASAAGAECELAREQRDALE 783
Query: 130 AQVKQLQEELEGLGVASTLPGLRGCGDIGTIPLPKLHSLQSQLRLDLEAVDGVIFQLRAK 189
QVK+LQEELE L L D+ + L L+SLQ QLR LE VD +F +++
Sbjct: 784 VQVKKLQEELERLHAGPEPQALPAFSDLEALSLSTLYSLQKQLRAHLEQVDKAVFHMQSV 843
Query: 190 QCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCK 226
+C+ C+E+ + PCQH LCE C A ECP C+
Sbjct: 844 KCLKCQEQKRAVL--PCQHAALCELC-AEGSECPICQ 877
>gi|191252814 RIMS binding protein 3B [Homo sapiens]
Length = 1639
Score = 47.4 bits (111), Expect = 1e-05
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 47 SPSPILSAGPPSSSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQE 106
SPSP L A P +SP A L RR+L++ + ++ W+ ++ A +R+ +E
Sbjct: 5 SPSP-LGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLRE 63
Query: 107 AKERARVADSDRQLALQKKEEVEAQ----VKQLQEELE 140
ER R RQLA + + + EAQ ++QLQEE++
Sbjct: 64 EAERER-----RQLADRLRSKWEAQRSRELRQLQEEMQ 96
>gi|191252806 RIMS binding protein 3C [Homo sapiens]
Length = 1639
Score = 47.4 bits (111), Expect = 1e-05
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 47 SPSPILSAGPPSSSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQE 106
SPSP L A P +SP A L RR+L++ + ++ W+ ++ A +R+ +E
Sbjct: 5 SPSP-LGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLRE 63
Query: 107 AKERARVADSDRQLALQKKEEVEAQ----VKQLQEELE 140
ER R RQLA + + + EAQ ++QLQEE++
Sbjct: 64 EAERER-----RQLADRLRSKWEAQRSRELRQLQEEMQ 96
>gi|153792195 DKFZP434H0735 protein [Homo sapiens]
Length = 1639
Score = 47.4 bits (111), Expect = 1e-05
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 47 SPSPILSAGPPSSSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQE 106
SPSP L A P +SP A L RR+L++ + ++ W+ ++ A +R+ +E
Sbjct: 5 SPSP-LGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLRE 63
Query: 107 AKERARVADSDRQLALQKKEEVEAQ----VKQLQEELE 140
ER R RQLA + + + EAQ ++QLQEE++
Sbjct: 64 EAERER-----RQLADRLRSKWEAQRSRELRQLQEEMQ 96
>gi|122937219 F-box protein 41 [Homo sapiens]
Length = 936
Score = 45.1 bits (105), Expect = 5e-05
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 16/156 (10%)
Query: 1 MTPPQQPPPLRSEPGTLGSAASSYS------PLGLNGVPGSIWDFVSGSFSPSPSPILSA 54
+ P P +EPG + +AA+ Y+ PLG S+ + P P P
Sbjct: 183 LVPASLPCEELAEPGLVPAAAARYALREIEIPLGELFARKSVASSACSTPPPGPGPGPCP 242
Query: 55 GPPSSSSASPNGAELA----------RVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREA 104
GP S+S ASP+ A++A R +L+ +R R EE Q++ Q E
Sbjct: 243 GPASASPASPSPADVAYEEGLARLKIRALEKLEVDRRLERLSEEVEQKIAGQVGRLQAEL 302
Query: 105 QEAKERARVADSDRQLALQKKEEVEAQVKQLQEELE 140
+ A + ++KEE+E + +L +++
Sbjct: 303 ERKAAELETARQESARLGREKEELEERASELSRQVD 338
>gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo
sapiens]
Length = 618
Score = 42.7 bits (99), Expect = 3e-04
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 110 RARVADSDRQLALQKKEEVEAQVKQLQEELEGLGVASTLPGLRGCGDIGTIPLPKLHSLQ 169
+A V + +++K ++ Q ++L + + G A+ +I + L +
Sbjct: 484 KANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLFVDK 543
Query: 170 SQLRLDLEAVDGVIF--QLRAKQ----CVACRERAHGAVLRPCQHHILCEPCAATAPECP 223
+ + E V G+ QLR Q C C ++ V PC H ++C+ CA + +CP
Sbjct: 544 NMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCP 603
Query: 224 YCKG 227
C+G
Sbjct: 604 ICRG 607
>gi|18490978 intermediate filament family orphan isoform 2 [Homo
sapiens]
Length = 559
Score = 41.6 bits (96), Expect = 6e-04
Identities = 46/158 (29%), Positives = 66/158 (41%), Gaps = 42/158 (26%)
Query: 9 PLRSEPGTLGSAASSYSPLGLNG----------VPGSIWDFVSGS-FSPSPSPILSAGPP 57
P RS G L +A+S S + +PG+IW F P P L GP
Sbjct: 159 PARSPAGPLAPSAASLSSSSTSTSTTYSSSARFMPGTIWSFSHARRLGPGLEPTLVQGP- 217
Query: 58 SSSSASPNGAE----------------LARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQ 101
S P+G LA+V+R+ DE KR+ WEE + Q+ D
Sbjct: 218 GLSWVHPDGVGVQIDTITPEIRALYNVLAKVKRERDEYKRR---WEEEYTVRIQLQD--- 271
Query: 102 REAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEEL 139
E +E A+ AD+ +EE+ +V+QL+ EL
Sbjct: 272 -RVNELQEEAQEADA-------CQEELALKVEQLKAEL 301
>gi|89213250 intermediate filament family orphan isoform 4 [Homo
sapiens]
Length = 563
Score = 41.6 bits (96), Expect = 6e-04
Identities = 46/158 (29%), Positives = 66/158 (41%), Gaps = 42/158 (26%)
Query: 9 PLRSEPGTLGSAASSYSPLGLNG----------VPGSIWDFVSGS-FSPSPSPILSAGPP 57
P RS G L +A+S S + +PG+IW F P P L GP
Sbjct: 159 PARSPAGPLAPSAASLSSSSTSTSTTYSSSARFMPGTIWSFSHARRLGPGLEPTLVQGP- 217
Query: 58 SSSSASPNGAE----------------LARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQ 101
S P+G LA+V+R+ DE KR+ WEE + Q+ D
Sbjct: 218 GLSWVHPDGVGVQIDTITPEIRALYNVLAKVKRERDEYKRR---WEEEYTVRIQLQD--- 271
Query: 102 REAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEEL 139
E +E A+ AD+ +EE+ +V+QL+ EL
Sbjct: 272 -RVNELQEEAQEADA-------CQEELALKVEQLKAEL 301
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 41.2 bits (95), Expect = 8e-04
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 188 AKQCVACRERAHGAVLRPCQHHILCEPCAA-----TAPECPYCK 226
A++CV C E A L PC H++ C CA + PECP C+
Sbjct: 597 ARECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACR 640
>gi|5729765 cell growth regulator with ring finger domain 1 [Homo
sapiens]
Length = 332
Score = 40.4 bits (93), Expect = 0.001
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 188 AKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCK 226
+K CV C+ VL PC+H LC+ C +CP C+
Sbjct: 271 SKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCR 309
>gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens]
Length = 284
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 59 SSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDR 118
++ S G ++ R Q DE K +I+ E ++ K + + R+ +E + + +SD
Sbjct: 119 AADESERGMKVIESRAQKDEEKMEIQ--EIQLKEAKHIAEDADRKYEEVARKLVIIESDL 176
Query: 119 QLALQKKEEVEAQVKQLQEEL 139
+ A ++ E E QV+QL+E+L
Sbjct: 177 ERAEERAELSEGQVRQLEEQL 197
>gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]
Length = 284
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 59 SSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDR 118
++ S G ++ R Q DE K +I+ E ++ K + + R+ +E + + +SD
Sbjct: 119 AADESERGMKVIESRAQKDEEKMEIQ--EIQLKEAKHIAEDADRKYEEVARKLVIIESDL 176
Query: 119 QLALQKKEEVEAQVKQLQEEL 139
+ A ++ E E QV+QL+E+L
Sbjct: 177 ERAEERAELSEGQVRQLEEQL 197
Score = 29.3 bits (64), Expect = 3.0
Identities = 12/49 (24%), Positives = 31/49 (63%)
Query: 93 VKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEELEG 141
+K+ + + + A +RA A++D++ A + +++E ++ LQ++L+G
Sbjct: 4 IKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKG 52
>gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens]
Length = 284
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 59 SSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDR 118
++ S G ++ R Q DE K +I+ E ++ K + + R+ +E + + +SD
Sbjct: 119 AADESERGMKVIESRAQKDEEKMEIQ--EIQLKEAKHIAEDADRKYEEVARKLVIIESDL 176
Query: 119 QLALQKKEEVEAQVKQLQEEL 139
+ A ++ E E QV+QL+E+L
Sbjct: 177 ERAEERAELSEGQVRQLEEQL 197
Score = 29.3 bits (64), Expect = 3.0
Identities = 12/49 (24%), Positives = 31/49 (63%)
Query: 93 VKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEELEG 141
+K+ + + + A +RA A++D++ A + +++E ++ LQ++L+G
Sbjct: 4 IKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKG 52
>gi|38788243 myosin regulatory light chain interacting protein [Homo
sapiens]
Length = 445
Score = 40.0 bits (92), Expect = 0.002
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 188 AKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCKGQ 228
A C+ C E + PC H + CE CAA CP C+ +
Sbjct: 384 AMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSR 424
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 39.7 bits (91), Expect = 0.002
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 28 GLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSSSASP-------NGAELARVRRQLDEAK 80
G +PG + S S S P S PS+ SA+P + E+ +Q+D+ K
Sbjct: 1789 GTQSIPGETEE--QDSLSMSTRPTCSESVPSAKSANPAVSKDFSSHDEINNYLQQIDQLK 1846
Query: 81 RKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEEL 139
+I EE Q+ K+ + E + D + ++ ++ ++ +Q+QEEL
Sbjct: 1847 ERIAGLEEEKQKNKEFSQTLENEKNTLLSQISTKDGELKMLQEEVTKMNLLNQQIQEEL 1905
Score = 31.2 bits (69), Expect = 0.79
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 76 LDEAKRKIRQWEESWQQVKQVCDAWQREAQE-AKERARVADSDRQLALQKKEEVEAQVKQ 134
L +A+ K R E +Q K + Q + E +KE + D RQL +Q +E ++ ++
Sbjct: 1191 LKKAQEKERHLREELKQQKDDYNRLQEQFDEQSKENENIGDQLRQLQIQVRESIDGKLPS 1250
Query: 135 LQEELEGLGVASTLPGL 151
++ S+ PGL
Sbjct: 1251 TDQQES----CSSTPGL 1263
Score = 28.9 bits (63), Expect = 3.9
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 72 VRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQ 131
++++L +RK+ + EES QV D Q+E A++R Q+ Q+ +++EA+
Sbjct: 250 MQQKLRVLQRKLEEHEESLVGRAQVVDLLQQELTAAEQR-------NQILSQQLQQMEAE 302
Query: 132 VKQLQEELE 140
L+ +E
Sbjct: 303 HNTLRNTVE 311
Score = 28.5 bits (62), Expect = 5.1
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 72 VRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQ 131
VR++ E K+R E + ++ ++ ++E +E KE+ R +Q QK E+E +
Sbjct: 1639 VRQEKQELYGKLRSTEANKKETEKQLQEAEQEMEEMKEKMRKFAKSKQ---QKILELEEE 1695
Query: 132 VKQLQEELEGLG 143
+L+ E+ G
Sbjct: 1696 NDRLRAEVHPAG 1707
>gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo
sapiens]
Length = 1638
Score = 38.9 bits (89), Expect = 0.004
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 68 ELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEE 127
E VR++LD+A R+I+ +E+ + ++Q + + + A A DR+L +E+
Sbjct: 515 EANAVRQELDDAFRQIKAYEKQIKTLQQEREDLNKLEVHTEALAAEASKDRKL----REQ 570
Query: 128 VEAQVKQLQEELEGL 142
E KQL+ ELEGL
Sbjct: 571 SEHYSKQLENELEGL 585
>gi|21264330 mindbomb homolog 2 [Homo sapiens]
Length = 1013
Score = 38.9 bits (89), Expect = 0.004
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 188 AKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCK 226
A +C+ C E A + PCQH +CE CA +C C+
Sbjct: 887 AAECLVCSELALLVLFSPCQHRTVCEECARRMKKCIRCQ 925
>gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo
sapiens]
Length = 497
Score = 38.5 bits (88), Expect = 0.005
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 167 SLQSQLRLDLEAVDGVIFQLRAKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYC 225
S Q+ L+ ++ + + K C C +R V PC H + C+ CA +CP C
Sbjct: 426 SSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMC 484
>gi|30348954 mindbomb homolog 1 [Homo sapiens]
Length = 1006
Score = 38.5 bits (88), Expect = 0.005
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 154 CGDIGTIPLPKLHSLQSQLRLDLEAVDGVIFQLRAKQCVACRERAHGAVLRPCQHHILCE 213
CG I T L +++ L + V + + ++CV C ++ + +PC H CE
Sbjct: 834 CGHIATCSL-----CSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACE 888
Query: 214 PCAATAPECPYCK 226
CA +C C+
Sbjct: 889 NCANLMKKCVQCR 901
Score = 32.3 bits (72), Expect = 0.35
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 189 KQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCKGQ 228
++C+ C + + PC H C C+ +C CK Q
Sbjct: 817 EECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQ 856
>gi|147902746 MEX3A protein [Homo sapiens]
Length = 520
Score = 38.5 bits (88), Expect = 0.005
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 189 KQCVACRERAHGAVLRPCQHHILCEPCAA-----TAPECPYC 225
+ C+ C E A L PC H++ C CA T PECP C
Sbjct: 467 RDCMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVC 508
>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
Length = 387
Score = 38.1 bits (87), Expect = 0.006
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 3 PPQQPPPLRSEPGTLGSAASSYSPLGLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSSSA 62
PPQQPPP P LGSAAS+ S F+ P+ + P S+S +
Sbjct: 116 PPQQPPP--PPPQQLGSAASAPRT--------STSSFLIKDILGDSKPLAACAPYSTSVS 165
Query: 63 SPNGA---------ELARVRRQLDEAKRKIRQWEESWQQVK--QVCDAWQREAQEAKE-- 109
SP+ E R + + +++K K+ + E+S +K + RE ++E
Sbjct: 166 SPHHTPKQESNAVHESFRPKLEQEDSKTKLDKREDSQSDIKCHGTKEEGDREITSSRESP 225
Query: 110 --------RARVADSDRQLALQKKEEVEAQVKQLQEELE 140
+AR A SD QL ++ + +Q+ ++
Sbjct: 226 PVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMD 264
>gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens]
Length = 373
Score = 37.7 bits (86), Expect = 0.008
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 16/193 (8%)
Query: 39 FVSGSFSPSPSPILSAGPPSSSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCD 98
F S +PS + G + A+V+ ++ A + ++ + +
Sbjct: 180 FFSNYTAPSATMSSFQGELMDGDQTSRSGVPAQVQSEITSANTEDDDDDDDEDDDDEEEN 239
Query: 99 AWQREAQEAKERARVADSDRQLALQKKEEVEAQ-VKQLQEELEGLGVASTLPGLRGCGDI 157
A R +KER R + SD L ++VE V+QL+E L A GC +
Sbjct: 240 AEDRNPGLSKERVRASLSD----LSSLDDVEGMSVRQLKEIL-----ARNFVNYSGCCEK 290
Query: 158 GTIPLPKLHSLQSQLRLDLEAVDGVIFQLRAKQ----CVACRERAHGAVLRPCQHHILCE 213
+ + K++ L + + ++ G QL+ ++ C C + VL C H + C
Sbjct: 291 WEL-VEKVNRLYKENEENQKSY-GERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCT 348
Query: 214 PCAATAPECPYCK 226
C ECP C+
Sbjct: 349 KCGKRMSECPICR 361
>gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens]
Length = 372
Score = 37.7 bits (86), Expect = 0.008
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 16/193 (8%)
Query: 39 FVSGSFSPSPSPILSAGPPSSSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCD 98
F S +PS + G + A+V+ ++ A + ++ + +
Sbjct: 179 FFSNYTAPSATMSSFQGELMDGDQTSRSGVPAQVQSEITSANTEDDDDDDDEDDDDEEEN 238
Query: 99 AWQREAQEAKERARVADSDRQLALQKKEEVEAQ-VKQLQEELEGLGVASTLPGLRGCGDI 157
A R +KER R + SD L ++VE V+QL+E L A GC +
Sbjct: 239 AEDRNPGLSKERVRASLSD----LSSLDDVEGMSVRQLKEIL-----ARNFVNYSGCCEK 289
Query: 158 GTIPLPKLHSLQSQLRLDLEAVDGVIFQLRAKQ----CVACRERAHGAVLRPCQHHILCE 213
+ + K++ L + + ++ G QL+ ++ C C + VL C H + C
Sbjct: 290 WEL-VEKVNRLYKENEENQKSY-GERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCT 347
Query: 214 PCAATAPECPYCK 226
C ECP C+
Sbjct: 348 KCGKRMSECPICR 360
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 37.7 bits (86), Expect = 0.008
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 46 PSPSPILSAGPPSSSSASPNGA--------ELARVRRQLDEAKRKIRQWEESWQQVKQVC 97
P+P+P ++ P + + A AR +R+ +E +R+++ + + +Q+
Sbjct: 578 PAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRMREEQLA 637
Query: 98 -----------DAWQREAQEAKERARVADSDRQLALQKKEEVEAQVKQLQE 137
+A +RE QEA+E+A+ +++ ++KEE EA+ ++ E
Sbjct: 638 REAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAE 688
Score = 36.6 bits (83), Expect = 0.019
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 2 TPPQQPPPLRSEPGTLGSAASSYSPLGLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSSS 61
TPP PP +++ + +S PL G + + SPS + P+ +
Sbjct: 47 TPPDTPPAMKN------ATSSKQLPLEPESPSGQVGPRPAPPQEESPSSEAKSRGPTPPA 100
Query: 62 ASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLA 121
P A R Q + Q+VK+ + + + +ERA+ + + +
Sbjct: 101 MGPRDARPPRRSSQPSPTAVPASDSPPTKQEVKKAGERHKLAKERREERAKYLAAKKAVW 160
Query: 122 LQKKEEVEA-QVKQLQE 137
L+K+E+ +A + KQLQE
Sbjct: 161 LEKEEKAKALREKQLQE 177
Score = 29.6 bits (65), Expect = 2.3
Identities = 18/73 (24%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 70 ARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVE 129
AR R+ + +R+ ++ E Q ++ + Q++ +EA+ R+R +++RQ L++++ +
Sbjct: 642 ARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSR-EEAERQ-RLEREKHFQ 699
Query: 130 AQVKQLQEELEGL 142
Q ++ QE + L
Sbjct: 700 QQEQERQERRKRL 712
>gi|226495417 coiled-coil domain containing 102A [Homo sapiens]
Length = 550
Score = 37.4 bits (85), Expect = 0.011
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 21/131 (16%)
Query: 41 SGSFSPSPSPILSAGPPSSSSASPNGAELARVR-RQLDEAKRKIRQ-------------- 85
SG+ SP P P L P + A + +R R+L+EA+ + Q
Sbjct: 44 SGTPSPGPPPALPLPPAPALLADGDWESREELRLRELEEARARAAQMEKTMRRWSDCTAN 103
Query: 86 WEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEELEGLGVA 145
W E W +V+ + + E ++ ++R + A ++++E + + + EL
Sbjct: 104 WREKWSKVRAERNRAREEVRQLRQRLDALTKELAGARRERQEAQGECEARGREL------ 157
Query: 146 STLPGLRGCGD 156
+ L G RG D
Sbjct: 158 ARLRGARGVAD 168
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 37.4 bits (85), Expect = 0.011
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 68 ELARVRRQLD----EAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQ 123
EL + RR+L+ + +I + + ++K + E Q A R + + +AL+
Sbjct: 1045 ELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKNMALK 1104
Query: 124 KKEEVEAQVKQLQEELE 140
K E+E+Q+ +LQE+LE
Sbjct: 1105 KIRELESQISELQEDLE 1121
Score = 37.4 bits (85), Expect = 0.011
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 67 AELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAK-ERARVADSDRQ------ 119
A + Q E ++K++ E Q+++ A +R ++A+ ER +AD
Sbjct: 1659 ASREEILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEIANSSGKGA 1718
Query: 120 LALQKKEEVEAQVKQLQEELE 140
LAL++K +EA++ QL+EELE
Sbjct: 1719 LALEEKRRLEARIAQLEEELE 1739
Score = 30.4 bits (67), Expect = 1.3
Identities = 16/75 (21%), Positives = 37/75 (49%)
Query: 68 ELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEE 127
+L V Q+D+ +R Q+++ + +R+ +EA+E A+ A++ R+ ++ E+
Sbjct: 1843 KLKDVLLQVDDERRNAEQYKDQADKASTRLKQLKRQLEEAEEEAQRANASRRKLQRELED 1902
Query: 128 VEAQVKQLQEELEGL 142
+ E+ L
Sbjct: 1903 ATETADAMNREVSSL 1917
>gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo
sapiens]
Length = 604
Score = 37.4 bits (85), Expect = 0.011
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 189 KQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCK 226
+ C C ++ V PC H ++C+ CA + +CP C+
Sbjct: 555 RTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICR 592
>gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo
sapiens]
Length = 604
Score = 37.4 bits (85), Expect = 0.011
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 189 KQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCK 226
+ C C ++ V PC H ++C+ CA + +CP C+
Sbjct: 555 RTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICR 592
>gi|28329422 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 37.4 bits (85), Expect = 0.011
Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 25/92 (27%)
Query: 1 MTPPQQPPPLRSE---------PGTLGSAASSYSPLGLNGVPGSIWDFVSGSFSPSPSPI 51
+TPP PPP ++ P TL + +S+SP LNG +PSP
Sbjct: 14 LTPPTMPPPPTTQGAPRTSSFTPTTLTNG-TSHSPTALNG-------------APSPPNG 59
Query: 52 LSAGPPSSSSASPNGAEL--ARVRRQLDEAKR 81
S GP SSSS+S +L A RQL + KR
Sbjct: 60 FSNGPSSSSSSSLANQQLPPACGARQLSKLKR 91
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,180,151
Number of Sequences: 37866
Number of extensions: 584704
Number of successful extensions: 7318
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 572
Number of HSP's that attempted gapping in prelim test: 5547
Number of HSP's gapped (non-prelim): 2239
length of query: 232
length of database: 18,247,518
effective HSP length: 99
effective length of query: 133
effective length of database: 14,498,784
effective search space: 1928338272
effective search space used: 1928338272
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.