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Search of human proteins with 149363672
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149363672 sarcalumenin [Homo sapiens]
(473 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149363672 sarcalumenin [Homo sapiens] 949 0.0
gi|30240932 EH-domain containing 1 [Homo sapiens] 224 1e-58
gi|7657056 EH-domain containing 3 [Homo sapiens] 221 1e-57
gi|21361462 EH-domain containing 2 [Homo sapiens] 213 2e-55
gi|21264315 EH-domain containing 4 [Homo sapiens] 210 3e-54
gi|58535453 CDK5 regulatory subunit associated protein 2 isoform... 31 2.8
gi|58535451 CDK5 regulatory subunit associated protein 2 isoform... 31 2.8
gi|5803029 ATP/GTP-binding protein isoform 1 [Homo sapiens] 31 2.8
gi|19923821 dihydropyrimidinase-like 5 [Homo sapiens] 30 3.6
gi|46592978 ATP-binding cassette sub-family G member 1 isoform 7... 30 4.8
gi|46592971 ATP-binding cassette sub-family G member 1 isoform 6... 30 4.8
gi|46592964 ATP-binding cassette sub-family G member 1 isoform 5... 30 4.8
gi|46592956 ATP-binding cassette sub-family G member 1 isoform 3... 30 4.8
gi|46592915 ATP-binding cassette sub-family G member 1 isoform 4... 30 4.8
gi|46592898 ATP-binding cassette sub-family G member 1 isoform 2... 30 4.8
gi|150456436 hypothetical protein LOC55719 isoform 1 [Homo sapiens] 30 6.2
gi|209915547 hypothetical protein LOC55719 isoform 2 [Homo sapiens] 30 6.2
gi|32454748 origin recognition complex subunit 4 [Homo sapiens] 29 8.1
gi|32454746 origin recognition complex subunit 4 [Homo sapiens] 29 8.1
gi|32454750 origin recognition complex subunit 4 [Homo sapiens] 29 8.1
>gi|149363672 sarcalumenin [Homo sapiens]
Length = 473
Score = 949 bits (2453), Expect = 0.0
Identities = 473/473 (100%), Positives = 473/473 (100%)
Query: 1 MRALVLLGCLLASLLFSGQAEETEDANEEAPLRDRSHIEKTLMLNEDKPSDDYSAVLQRL 60
MRALVLLGCLLASLLFSGQAEETEDANEEAPLRDRSHIEKTLMLNEDKPSDDYSAVLQRL
Sbjct: 1 MRALVLLGCLLASLLFSGQAEETEDANEEAPLRDRSHIEKTLMLNEDKPSDDYSAVLQRL 60
Query: 61 RKIYHSSIKPLEQSYKYNELRQHEITDGEITSKPMVLFLGPWSVGKSTMINYLLGLENTR 120
RKIYHSSIKPLEQSYKYNELRQHEITDGEITSKPMVLFLGPWSVGKSTMINYLLGLENTR
Sbjct: 61 RKIYHSSIKPLEQSYKYNELRQHEITDGEITSKPMVLFLGPWSVGKSTMINYLLGLENTR 120
Query: 121 YQLYTGAEPTTSEFTVLMHGPKLKTIEGIVMAADSARSFSPLEKFGQNFLEKLIGIEVPH 180
YQLYTGAEPTTSEFTVLMHGPKLKTIEGIVMAADSARSFSPLEKFGQNFLEKLIGIEVPH
Sbjct: 121 YQLYTGAEPTTSEFTVLMHGPKLKTIEGIVMAADSARSFSPLEKFGQNFLEKLIGIEVPH 180
Query: 181 KLLERVTFVDTPGIIENRKQQERGYPFNDVCQWFIDRADLIFVVFDPTKLDVGLELEMLF 240
KLLERVTFVDTPGIIENRKQQERGYPFNDVCQWFIDRADLIFVVFDPTKLDVGLELEMLF
Sbjct: 181 KLLERVTFVDTPGIIENRKQQERGYPFNDVCQWFIDRADLIFVVFDPTKLDVGLELEMLF 240
Query: 241 RQLKGRESQIRIILNKADNLATQMLMRVYGALFWSLAPLINVTEPPRVYVSSFWPQEYKP 300
RQLKGRESQIRIILNKADNLATQMLMRVYGALFWSLAPLINVTEPPRVYVSSFWPQEYKP
Sbjct: 241 RQLKGRESQIRIILNKADNLATQMLMRVYGALFWSLAPLINVTEPPRVYVSSFWPQEYKP 300
Query: 301 DTHQELFLQEEISLLEDLNQVIENRLENKIAFIRQHAIRVRIHALLVDRYLQTYKDKMTF 360
DTHQELFLQEEISLLEDLNQVIENRLENKIAFIRQHAIRVRIHALLVDRYLQTYKDKMTF
Sbjct: 301 DTHQELFLQEEISLLEDLNQVIENRLENKIAFIRQHAIRVRIHALLVDRYLQTYKDKMTF 360
Query: 361 FSDGELVFKDIVEDPDKFYIFKTILAKTNVSKFDLPNREAYKDFFGINPISSFKLLSQQC 420
FSDGELVFKDIVEDPDKFYIFKTILAKTNVSKFDLPNREAYKDFFGINPISSFKLLSQQC
Sbjct: 361 FSDGELVFKDIVEDPDKFYIFKTILAKTNVSKFDLPNREAYKDFFGINPISSFKLLSQQC 420
Query: 421 SYMGGCFLEKIERAITQELPGLLGSLGLGKNPGALNCDKTGCSETPKNRYRKH 473
SYMGGCFLEKIERAITQELPGLLGSLGLGKNPGALNCDKTGCSETPKNRYRKH
Sbjct: 421 SYMGGCFLEKIERAITQELPGLLGSLGLGKNPGALNCDKTGCSETPKNRYRKH 473
>gi|30240932 EH-domain containing 1 [Homo sapiens]
Length = 534
Score = 224 bits (572), Expect = 1e-58
Identities = 124/370 (33%), Positives = 198/370 (53%), Gaps = 9/370 (2%)
Query: 48 KPSDDYSAVLQRLRKIYHSSIKPLEQSYKYNELRQHEITDGEITSKPMVLFLGPWSVGKS 107
K + + V + LR++Y + PLE+ Y+++E + D + +KPMVL +G +S GK+
Sbjct: 13 KEPELFQTVAEGLRQLYAQKLLPLEEHYRFHEFHSPALEDADFDNKPMVLLVGQYSTGKT 72
Query: 108 TMINYLLGLENTRYQLYTGAEPTTSEFTVLMHGPKLKTIEGIVMAADSARSFSPLEKFGQ 167
T I +L+ E + G EPTT F +MHGP + G + D R F L FG
Sbjct: 73 TFIRHLI--EQDFPGMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRPFRKLNAFGN 130
Query: 168 NFLEKLIGIEVPHKLLERVTFVDTPGIIENRKQQ-ERGYPFNDVCQWFIDRADLIFVVFD 226
FL + + ++P+ +L+ ++ +DTPGI+ KQ+ RGY F V +WF +R D I ++FD
Sbjct: 131 AFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFD 190
Query: 227 PTKLDVGLELEMLFRQLKGRESQIRIILNKADNLATQMLMRVYGALFWSLAPLINVTEPP 286
KLD+ E + + LK E +IR++LNKAD + TQ LMRVYGAL WSL +IN E
Sbjct: 191 AHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLGKIINTPEVV 250
Query: 287 RVYVSSFWPQEYKPDTHQELFLQEEISLLEDLNQVIENRLENKIAFIRQHAIRVRIHALL 346
RVY+ SFW +++LF EE L +D+ + N K+ + + A ++HA +
Sbjct: 251 RVYIGSFWSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYI 310
Query: 347 VDRYLQTYKDKMTFFSDGELVFKDIVEDPDKFYIFKTILAKTNVSKFDLPNREAYKDFFG 406
+ + K +M E K++V + + I++ I + +S D P+ ++
Sbjct: 311 I----SSLKKEMPNVFGKESKKKELVNNLGE--IYQKIEREHQISPGDFPSLRKMQELLQ 364
Query: 407 INPISSFKLL 416
S F+ L
Sbjct: 365 TQDFSKFQAL 374
>gi|7657056 EH-domain containing 3 [Homo sapiens]
Length = 535
Score = 221 bits (563), Expect = 1e-57
Identities = 125/373 (33%), Positives = 197/373 (52%), Gaps = 9/373 (2%)
Query: 48 KPSDDYSAVLQRLRKIYHSSIKPLEQSYKYNELRQHEITDGEITSKPMVLFLGPWSVGKS 107
K + + V + L+K+Y S + PLE+ Y+++E + D + +KPMVL +G +S GK+
Sbjct: 13 KDPEVFQTVSEGLKKLYKSKLLPLEEHYRFHEFHSPALEDADFDNKPMVLLVGQYSTGKT 72
Query: 108 TMINYLLGLENTRYQLYTGAEPTTSEFTVLMHGPKLKTIEGIVMAADSARSFSPLEKFGQ 167
T I YLL E + G EPTT F +M G I G + D + F L FG
Sbjct: 73 TFIRYLL--EQDFPGMRIGPEPTTDSFIAVMQGDMEGIIPGNALVVDPKKPFRKLNAFGN 130
Query: 168 NFLEKLIGIEVPHKLLERVTFVDTPGIIENRKQQ-ERGYPFNDVCQWFIDRADLIFVVFD 226
FL + + ++P+ +LE ++ +DTPGI+ KQ+ RGY F V +WF +R D I ++FD
Sbjct: 131 AFLNRFVCAQLPNPVLESISVIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFD 190
Query: 227 PTKLDVGLELEMLFRQLKGRESQIRIILNKADNLATQMLMRVYGALFWSLAPLINVTEPP 286
KLD+ E + + LK E ++R++LNKAD + TQ LMRVYGAL WSL ++N E
Sbjct: 191 AHKLDISDEFSEVIKALKNHEDKMRVVLNKADQIETQQLMRVYGALMWSLGKIVNTPEVI 250
Query: 287 RVYVSSFWPQEYKPDTHQELFLQEEISLLEDLNQVIENRLENKIAFIRQHAIRVRIHALL 346
RVY+ SFW +++LF EE L D+ + N K+ + + A ++HA +
Sbjct: 251 RVYIGSFWSHPLLIPDNRKLFEAEEQDLFRDIQSLPRNAALRKLNDLIKRARLAKVHAYI 310
Query: 347 VDRYLQTYKDKMTFFSDGELVFKDIVEDPDKFYIFKTILAKTNVSKFDLPNREAYKDFFG 406
+ + K +M + K++V + + I+ I + +S D PN + +D
Sbjct: 311 I----SSLKKEMPSVFGKDNKKKELVNNLAE--IYGRIEREHQISPGDFPNLKRMQDQLQ 364
Query: 407 INPISSFKLLSQQ 419
S F+ L +
Sbjct: 365 AQDFSKFQPLKSK 377
>gi|21361462 EH-domain containing 2 [Homo sapiens]
Length = 543
Score = 213 bits (543), Expect = 2e-55
Identities = 126/389 (32%), Positives = 205/389 (52%), Gaps = 16/389 (4%)
Query: 56 VLQRLRKIYHSSIKPLEQSYKYNELRQHEITDGEITSKPMVLFLGPWSVGKSTMINYLLG 115
V L+++Y + + PLE+ Y++ + D + KPMVL G +S GK++ I YLL
Sbjct: 21 VTSALKELYRTKLLPLEEHYRFGAFHSPALEDADFDGKPMVLVAGQYSTGKTSFIQYLLE 80
Query: 116 LENTRYQLYTGAEPTTSEFTVLMHGPKLKTIEGIVMAADSARSFSPLEKFGQNFLEKLIG 175
E ++ G EPTT F +MHG T+ G + D + F L FG FL + +
Sbjct: 81 QEVPGSRV--GPEPTTDCFVAVMHGDTEGTVPGNALVVDPDKPFRKLNPFGNTFLNRFMC 138
Query: 176 IEVPHKLLERVTFVDTPGIIENRKQQ-ERGYPFNDVCQWFIDRADLIFVVFDPTKLDVGL 234
++P+++LE ++ +DTPGI+ KQ+ RGY F V +WF +R DLI ++FD KL++
Sbjct: 139 AQLPNQVLESISIIDTPGILSGAKQRVSRGYDFPAVLRWFAERVDLIILLFDAHKLEISD 198
Query: 235 ELEMLFRQLKGRESQIRIILNKADNLATQMLMRVYGALFWSLAPLINVTEPPRVYVSSFW 294
E L+G E +IR++LNKAD + TQ LMRVYGAL W+L ++ E RVY+ SFW
Sbjct: 199 EFSEAIGALRGHEDKIRVVLNKADMVETQQLMRVYGALMWALGKVVGTPEVLRVYIGSFW 258
Query: 295 PQEYKPDTHQELFLQEEISLLEDLNQVIENRLENKIAFIRQHAIRVRIHALLVDRYLQTY 354
Q ++ LF EE L D+ + + K+ + + A VR+HA ++ YL+
Sbjct: 259 SQPLLVPDNRRLFELEEQDLFRDIQGLPRHAALRKLNDLVKRARLVRVHAYIIS-YLK-- 315
Query: 355 KDKMTFFSDGELVFKDIVEDPDKFYIFKTILAKTNVSKFDLPNREAYKDFFGINPISSFK 414
K+ + F + I++ P IF I + ++S D P+ + ++ + + F
Sbjct: 316 KEMPSVFGKENKKKQLILKLP---VIFAKIQLEHHISPGDFPDCQKMQELLMAHDFTKFH 372
Query: 415 LLSQQCSYMGGCFLEKIERAITQELPGLL 443
L + LE ++ +T ++ L+
Sbjct: 373 SLKPK-------LLEALDEMLTHDIAKLM 394
>gi|21264315 EH-domain containing 4 [Homo sapiens]
Length = 541
Score = 210 bits (534), Expect = 3e-54
Identities = 117/355 (32%), Positives = 192/355 (54%), Gaps = 9/355 (2%)
Query: 50 SDDYSAVLQRLRKIYHSSIKPLEQSYKYNELRQHEITDGEITSKPMVLFLGPWSVGKSTM 109
+D V LR +Y + PLE++Y+++E + D + +KPM+L +G +S GK+T
Sbjct: 18 ADAVQTVTGGLRSLYLRKVLPLEEAYRFHEFHSPALEDADFENKPMILLVGQYSTGKTTF 77
Query: 110 INYLLGLENTRYQLYTGAEPTTSEFTVLMHGPKLKTIEGIVMAADSARSFSPLEKFGQNF 169
I YLL E + G EPTT F +M+G + G + D + F L +FG F
Sbjct: 78 IRYLL--EQDFPGMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFGNAF 135
Query: 170 LEKLIGIEVPHKLLERVTFVDTPGIIENRKQQ-ERGYPFNDVCQWFIDRADLIFVVFDPT 228
L + + ++P+++L+ ++ +D+PGI+ KQ+ RGY F V QWF +R D I ++FD
Sbjct: 136 LNRFMCSQLPNQVLKSISVIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAH 195
Query: 229 KLDVGLELEMLFRQLKGRESQIRIILNKADNLATQMLMRVYGALFWSLAPLINVTEPPRV 288
KLD+ E + +G++ +IR++LNKAD + TQ LMRVYGAL WSL +IN E RV
Sbjct: 196 KLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRV 255
Query: 289 YVSSFWPQEYKPDTHQELFLQEEISLLEDLNQVIENRLENKIAFIRQHAIRVRIHALLVD 348
Y+ SFW Q + ++ LF E L D+ + + K+ + + A ++HA ++
Sbjct: 256 YIGSFWAQPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIIS 315
Query: 349 RYLQTYKDKMTFFSDGELVFKDIVEDPDKFYIFKTILAKTNVSKFDLPNREAYKD 403
YL K +M E ++++ + YI + + +S D P +A ++
Sbjct: 316 -YL---KKEMPSVFGKENKKRELISRLPEIYI--QLQREYQISAGDFPEVKAMQE 364
>gi|58535453 CDK5 regulatory subunit associated protein 2 isoform b
[Homo sapiens]
Length = 1814
Score = 30.8 bits (68), Expect = 2.8
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 40 KTLMLNEDKPSDDYSAVLQRLRK---IYHSSIKPLEQSYKYNELR 81
KT+ E K S DY ++Q L+K IY +K L++S N L+
Sbjct: 537 KTIFSKEKKQSSDYEELIQVLKKEQDIYTHLVKSLQESDSINNLQ 581
>gi|58535451 CDK5 regulatory subunit associated protein 2 isoform a
[Homo sapiens]
Length = 1893
Score = 30.8 bits (68), Expect = 2.8
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 40 KTLMLNEDKPSDDYSAVLQRLRK---IYHSSIKPLEQSYKYNELR 81
KT+ E K S DY ++Q L+K IY +K L++S N L+
Sbjct: 537 KTIFSKEKKQSSDYEELIQVLKKEQDIYTHLVKSLQESDSINNLQ 581
>gi|5803029 ATP/GTP-binding protein isoform 1 [Homo sapiens]
Length = 425
Score = 30.8 bits (68), Expect = 2.8
Identities = 35/125 (28%), Positives = 47/125 (37%), Gaps = 11/125 (8%)
Query: 94 PMVLFLGPWSVGKSTMINYLLGLENTRYQLYTGAEPTTSEFTVLMHGPKLKTIEG---IV 150
P V+ +GP VGKST+ LL Y + G PT E V + G I
Sbjct: 115 PRVMVVGPTDVGKSTVCRLLL-----NYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIE 169
Query: 151 MAADSARSFSPLEKFGQNFLEKLIG--IEVPHKLLERVTFVDTPGIIENRKQQERGYPFN 208
AD FS +F G I++ +K+ R+ V NR+ G N
Sbjct: 170 RPADVEEGFSIQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVIN 229
Query: 209 DVCQW 213
C W
Sbjct: 230 -TCGW 233
>gi|19923821 dihydropyrimidinase-like 5 [Homo sapiens]
Length = 564
Score = 30.4 bits (67), Expect = 3.6
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 139 HGPKLKTIE--------GIVMAADSARSFSPLEKFGQNFLEKLIGIEVPHKL--LERVTF 188
HG L TI G+ M A+ F PL F +KL+ E K+ ++R +
Sbjct: 433 HGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREKTLKVRGVDRTPY 492
Query: 189 VDTPGIIENRKQQERGYPFND 209
+ ++ + ++E G P D
Sbjct: 493 LGDVAVVVHPGKKEMGTPLAD 513
>gi|46592978 ATP-binding cassette sub-family G member 1 isoform 7
[Homo sapiens]
Length = 663
Score = 30.0 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 88 GEITSKPMVLFLGPWSVGKSTMINYLLGLENT 119
G+ S +V +GP GKST++N L G T
Sbjct: 103 GKFNSGELVAIMGPSGAGKSTLMNILAGYRET 134
>gi|46592971 ATP-binding cassette sub-family G member 1 isoform 6
[Homo sapiens]
Length = 644
Score = 30.0 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 88 GEITSKPMVLFLGPWSVGKSTMINYLLGLENT 119
G+ S +V +GP GKST++N L G T
Sbjct: 84 GKFNSGELVAIMGPSGAGKSTLMNILAGYRET 115
>gi|46592964 ATP-binding cassette sub-family G member 1 isoform 5
[Homo sapiens]
Length = 668
Score = 30.0 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 88 GEITSKPMVLFLGPWSVGKSTMINYLLGLENT 119
G+ S +V +GP GKST++N L G T
Sbjct: 108 GKFNSGELVAIMGPSGAGKSTLMNILAGYRET 139
>gi|46592956 ATP-binding cassette sub-family G member 1 isoform 3
[Homo sapiens]
Length = 677
Score = 30.0 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 88 GEITSKPMVLFLGPWSVGKSTMINYLLGLENT 119
G+ S +V +GP GKST++N L G T
Sbjct: 117 GKFNSGELVAIMGPSGAGKSTLMNILAGYRET 148
>gi|46592915 ATP-binding cassette sub-family G member 1 isoform 4
[Homo sapiens]
Length = 678
Score = 30.0 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 88 GEITSKPMVLFLGPWSVGKSTMINYLLGLENT 119
G+ S +V +GP GKST++N L G T
Sbjct: 106 GKFNSGELVAIMGPSGAGKSTLMNILAGYRET 137
>gi|46592898 ATP-binding cassette sub-family G member 1 isoform 2
[Homo sapiens]
Length = 666
Score = 30.0 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 88 GEITSKPMVLFLGPWSVGKSTMINYLLGLENT 119
G+ S +V +GP GKST++N L G T
Sbjct: 106 GKFNSGELVAIMGPSGAGKSTLMNILAGYRET 137
>gi|150456436 hypothetical protein LOC55719 isoform 1 [Homo sapiens]
Length = 1173
Score = 29.6 bits (65), Expect = 6.2
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 123 LYTGAEPTTSEFTVLMH-GPKLKTIEGIVMAADSARSFSPLEKFGQNFLEKLIGIEVPHK 181
L G +S++T +H G T+E +V + + L+K Q + + GI+ P +
Sbjct: 645 LSKGLRSQSSDYTGHVHPGTYTNTLERLVKEMEDTQRLDELQKQLQEDIRQGRGIKSPIR 704
Query: 182 LLERVTFVDTPGIIENRKQ 200
+ E + D G++E K+
Sbjct: 705 IGEEDSTDDEDGLLEEHKE 723
>gi|209915547 hypothetical protein LOC55719 isoform 2 [Homo sapiens]
Length = 1186
Score = 29.6 bits (65), Expect = 6.2
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 123 LYTGAEPTTSEFTVLMH-GPKLKTIEGIVMAADSARSFSPLEKFGQNFLEKLIGIEVPHK 181
L G +S++T +H G T+E +V + + L+K Q + + GI+ P +
Sbjct: 645 LSKGLRSQSSDYTGHVHPGTYTNTLERLVKEMEDTQRLDELQKQLQEDIRQGRGIKSPIR 704
Query: 182 LLERVTFVDTPGIIENRKQ 200
+ E + D G++E K+
Sbjct: 705 IGEEDSTDDEDGLLEEHKE 723
>gi|32454748 origin recognition complex subunit 4 [Homo sapiens]
Length = 436
Score = 29.3 bits (64), Expect = 8.1
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 61 RKIYHSSIKPLEQSYKY-NELRQHEITDGEITSKPMVLFLGPWSVGKSTMINYLL 114
R+ HS++ ++ YK+ +EL + GE S VL +GP GK+ +IN+ L
Sbjct: 30 RQSPHSNLFGVQVQYKHLSELLKRTALHGESNS---VLIIGPRGSGKTMLINHAL 81
>gi|32454746 origin recognition complex subunit 4 [Homo sapiens]
Length = 436
Score = 29.3 bits (64), Expect = 8.1
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 61 RKIYHSSIKPLEQSYKY-NELRQHEITDGEITSKPMVLFLGPWSVGKSTMINYLL 114
R+ HS++ ++ YK+ +EL + GE S VL +GP GK+ +IN+ L
Sbjct: 30 RQSPHSNLFGVQVQYKHLSELLKRTALHGESNS---VLIIGPRGSGKTMLINHAL 81
>gi|32454750 origin recognition complex subunit 4 [Homo sapiens]
Length = 436
Score = 29.3 bits (64), Expect = 8.1
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 61 RKIYHSSIKPLEQSYKY-NELRQHEITDGEITSKPMVLFLGPWSVGKSTMINYLL 114
R+ HS++ ++ YK+ +EL + GE S VL +GP GK+ +IN+ L
Sbjct: 30 RQSPHSNLFGVQVQYKHLSELLKRTALHGESNS---VLIIGPRGSGKTMLINHAL 81
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,533,911
Number of Sequences: 37866
Number of extensions: 773288
Number of successful extensions: 2007
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1986
Number of HSP's gapped (non-prelim): 22
length of query: 473
length of database: 18,247,518
effective HSP length: 106
effective length of query: 367
effective length of database: 14,233,722
effective search space: 5223775974
effective search space used: 5223775974
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.