Search of human proteins with 148833494

Search of human proteins with 148833494

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148833494 interferon regulatory factor 5 isoform d [Homo
sapiens]
         (514 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148833494 interferon regulatory factor 5 isoform d [Homo sapi...  1081   0.0  
gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens]   1051   0.0  
gi|148833496 interferon regulatory factor 5 isoform b [Homo sapi...  1038   0.0  
gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens]  1038   0.0  
gi|148833515 interferon regulatory factor 5 isoform c [Homo sapi...  1008   0.0  
gi|148833492 interferon regulatory factor 5 isoform c [Homo sapi...  1008   0.0  
gi|148833488 interferon regulatory factor 5 isoform c [Homo sapi...  1008   0.0  
gi|5453700 interferon regulatory factor 6 [Homo sapiens]              446   e-125
gi|167555104 interferon regulatory factor 4 [Homo sapiens]            204   2e-52
gi|4504567 interferon regulatory factor 8 [Homo sapiens]              197   2e-50
gi|4504725 interferon regulatory factor 3 [Homo sapiens]              169   4e-42
gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens]   164   1e-40
gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens]    164   1e-40
gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens]    157   2e-38
gi|25282407 interferon-stimulated transcription factor 3, gamma ...   140   4e-33
gi|153082752 interferon regulatory factor 2 [Homo sapiens]            114   2e-25
gi|4504721 interferon regulatory factor 1 [Homo sapiens]              109   7e-24
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    50   4e-06
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    49   8e-06
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         49   1e-05
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ...    49   1e-05
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ...    49   1e-05
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [...    49   1e-05
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]          49   1e-05
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]          49   1e-05
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]          49   1e-05
gi|7706501 WW domain binding protein 11 [Homo sapiens]                 47   4e-05
gi|24497513 homeobox A3 isoform a [Homo sapiens]                       47   5e-05
gi|13562112 homeobox A3 isoform a [Homo sapiens]                       47   5e-05
gi|157168329 formin 1 [Homo sapiens]                                   46   9e-05

>gi|148833494 interferon regulatory factor 5 isoform d [Homo
           sapiens]
          Length = 514

 Score = 1081 bits (2796), Expect = 0.0
 Identities = 514/514 (100%), Positives = 514/514 (100%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180

Query: 181 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 240
           WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
Sbjct: 181 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 240

Query: 241 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 300
           ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
Sbjct: 241 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 300

Query: 301 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 360
           QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
Sbjct: 301 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 360

Query: 361 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 420
           FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
Sbjct: 361 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 420

Query: 421 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 480
           DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
Sbjct: 421 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 480

Query: 481 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 514
           WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 481 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 514


>gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens]
          Length = 504

 Score = 1051 bits (2719), Expect = 0.0
 Identities = 504/514 (98%), Positives = 504/514 (98%), Gaps = 10/514 (1%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180

Query: 181 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 240
           WPPTLQPP          TLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
Sbjct: 181 WPPTLQPP----------TLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 230

Query: 241 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 300
           ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
Sbjct: 231 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 290

Query: 301 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 360
           QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
Sbjct: 291 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 350

Query: 361 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 420
           FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
Sbjct: 351 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 410

Query: 421 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 480
           DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
Sbjct: 411 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 470

Query: 481 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 514
           WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 471 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 504


>gi|148833496 interferon regulatory factor 5 isoform b [Homo
           sapiens]
          Length = 498

 Score = 1038 bits (2684), Expect = 0.0
 Identities = 498/514 (96%), Positives = 498/514 (96%), Gaps = 16/514 (3%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT                EDVK
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT----------------EDVK 164

Query: 181 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 240
           WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
Sbjct: 165 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 224

Query: 241 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 300
           ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
Sbjct: 225 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 284

Query: 301 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 360
           QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
Sbjct: 285 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 344

Query: 361 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 420
           FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
Sbjct: 345 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 404

Query: 421 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 480
           DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
Sbjct: 405 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 464

Query: 481 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 514
           WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 465 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 498


>gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens]
          Length = 498

 Score = 1038 bits (2684), Expect = 0.0
 Identities = 498/514 (96%), Positives = 498/514 (96%), Gaps = 16/514 (3%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT                EDVK
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT----------------EDVK 164

Query: 181 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 240
           WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
Sbjct: 165 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 224

Query: 241 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 300
           ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
Sbjct: 225 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 284

Query: 301 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 360
           QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
Sbjct: 285 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 344

Query: 361 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 420
           FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
Sbjct: 345 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 404

Query: 421 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 480
           DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
Sbjct: 405 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 464

Query: 481 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 514
           WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 465 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 498


>gi|148833515 interferon regulatory factor 5 isoform c [Homo
           sapiens]
          Length = 488

 Score = 1008 bits (2607), Expect = 0.0
 Identities = 488/514 (94%), Positives = 488/514 (94%), Gaps = 26/514 (5%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT                EDVK
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT----------------EDVK 164

Query: 181 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 240
           WPPTLQPP          TLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
Sbjct: 165 WPPTLQPP----------TLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 214

Query: 241 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 300
           ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
Sbjct: 215 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 274

Query: 301 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 360
           QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
Sbjct: 275 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 334

Query: 361 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 420
           FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
Sbjct: 335 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 394

Query: 421 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 480
           DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
Sbjct: 395 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 454

Query: 481 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 514
           WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 455 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 488


>gi|148833492 interferon regulatory factor 5 isoform c [Homo
           sapiens]
          Length = 488

 Score = 1008 bits (2607), Expect = 0.0
 Identities = 488/514 (94%), Positives = 488/514 (94%), Gaps = 26/514 (5%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT                EDVK
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT----------------EDVK 164

Query: 181 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 240
           WPPTLQPP          TLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
Sbjct: 165 WPPTLQPP----------TLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 214

Query: 241 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 300
           ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
Sbjct: 215 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 274

Query: 301 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 360
           QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
Sbjct: 275 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 334

Query: 361 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 420
           FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
Sbjct: 335 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 394

Query: 421 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 480
           DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
Sbjct: 395 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 454

Query: 481 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 514
           WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 455 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 488


>gi|148833488 interferon regulatory factor 5 isoform c [Homo
           sapiens]
          Length = 488

 Score = 1008 bits (2607), Expect = 0.0
 Identities = 488/514 (94%), Positives = 488/514 (94%), Gaps = 26/514 (5%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT                EDVK
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT----------------EDVK 164

Query: 181 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 240
           WPPTLQPP          TLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
Sbjct: 165 WPPTLQPP----------TLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 214

Query: 241 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 300
           ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
Sbjct: 215 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 274

Query: 301 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 360
           QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
Sbjct: 275 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 334

Query: 361 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 420
           FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
Sbjct: 335 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 394

Query: 421 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 480
           DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
Sbjct: 395 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 454

Query: 481 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 514
           WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 455 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 488


>gi|5453700 interferon regulatory factor 6 [Homo sapiens]
          Length = 467

 Score =  446 bits (1147), Expect = e-125
 Identities = 245/499 (49%), Positives = 312/499 (62%), Gaps = 63/499 (12%)

Query: 12  PRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKET 71
           PRRVRLKPWLVAQV+S  YPGL W++ + K F IPW+HATRH P Q+ +NTIFKAWA ET
Sbjct: 5   PRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVET 64

Query: 72  GKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDS- 130
           GKY EGVD+ DPAKWKA LRCALNKSR+F L+YDG +++P  P KIY+VC   P P  S 
Sbjct: 65  GKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDI-PQPQGSI 123

Query: 131 -------QPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPP 183
                    P D      +EE+EE+EL +    + + D         P+  +        
Sbjct: 124 INPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTF-------PFLNI-------- 168

Query: 184 TLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPG--PLPA 241
                                       + SP+AP             E + P   PL  
Sbjct: 169 ----------------------------NGSPMAPASVGNCSVGNCSPEAVWPKTEPLEM 200

Query: 242 SLPPAGEQLL---PDLLISPHMLPLTDLEIKFQYRGRP-PRALTISNPHGCRLFYSQLEA 297
            +P A  Q     P+L IS   LP+TDL+IKFQYRG+   + +T+SNP GCRLFY  L  
Sbjct: 201 EVPQAPIQPFYSSPELWISS--LPMTDLDIKFQYRGKEYGQTMTVSNPQGCRLFYGDLGP 258

Query: 298 TQEQVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQ 357
             +Q ELFGP+SLEQV+FP PE I ++KQ+ +T++LLDV+DRGLIL++ G  +YAIRLCQ
Sbjct: 259 MPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLILEVSGHAIYAIRLCQ 318

Query: 358 CKVFWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGE 417
           CKV+WSGPCA +    PN I+R+ K KLF LE FL++LI  QKGQ    PPFEI+ CFGE
Sbjct: 319 CKVYWSGPCAPSL-VAPNLIERQKKVKLFCLETFLSDLIAHQKGQIEKQPPFEIYLCFGE 377

Query: 418 EWPDRKPREKKLITVQVVPVAARLLLEMFSGELSWSAD--SIRLQISNPDLKDRMVEQFK 475
           EWPD KP E+KLI VQV+PV AR++ EMFSG+ + S D  S+RLQIS PD+KD +V Q K
Sbjct: 378 EWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAQLK 437

Query: 476 ELHHIWQSQQRLQPVAQAP 494
           +L+ I Q+Q+  QP+   P
Sbjct: 438 QLYRILQTQESWQPMQPTP 456


>gi|167555104 interferon regulatory factor 4 [Homo sapiens]
          Length = 451

 Score =  204 bits (519), Expect = 2e-52
 Identities = 153/461 (33%), Positives = 219/461 (47%), Gaps = 56/461 (12%)

Query: 16  RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
           +L+ WL+ Q++S +YPGL W N EK +F IPW+HA +   +++ D  +FKAWA   GK+ 
Sbjct: 23  KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 82

Query: 76  EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPED 135
           EG+D+ DP  WK  LRCALNKS DF  + +  +     PYK+Y +            PE 
Sbjct: 83  EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV-----------PEG 131

Query: 136 YSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLRPPTL 195
              GA +              L+L D   S  H  PY++       P       + PP  
Sbjct: 132 AKKGAKQ--------------LTLEDPQMSMSH--PYTMTTPYPSLPAQQVHNYMMPPLD 175

Query: 196 QPPTLQPPVVLGPPAPDPSPLA-PPPGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDL 254
           +      P    P  P   P+   P G+        +     G   A  PP  E   P +
Sbjct: 176 RSWRDYVPDQPHPEIPYQCPMTFGPRGHHWQGPACENGCQVTGTFYACAPP--ESQAPGV 233

Query: 255 LISPHM-----LPLTD--LEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGP 307
              P +     L  +D  L I   YR    + LT S+P GCR+ +            +  
Sbjct: 234 PTEPSIRSAEALAFSDCRLHICLYYREILVKELTTSSPEGCRISHG---------HTYDA 284

Query: 308 ISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCA 367
            +L+QV FP PED   + QR    +LL  L+RG++L +    LYA RLCQ +++W GP A
Sbjct: 285 SNLDQVLFPYPED---NGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLA 341

Query: 368 SAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREK 427
             +D  PN ++R+   KLF  + FL+EL  F      + P F++  CFGEE+PD + R++
Sbjct: 342 LCNDR-PNKLERDQTCKLFDTQQFLSELQAFAH-HGRSLPRFQVTLCFGEEFPDPQ-RQR 398

Query: 428 KLITVQVVPVAARLL---LEMFSGELSWSADSIRLQISNPD 465
           KLIT  V P+ AR L    +  SG      D +   ISNP+
Sbjct: 399 KLITAHVEPLLARQLYYFAQQNSGHFLRGYD-LPEHISNPE 438


>gi|4504567 interferon regulatory factor 8 [Homo sapiens]
          Length = 426

 Score =  197 bits (500), Expect = 2e-50
 Identities = 144/432 (33%), Positives = 196/432 (45%), Gaps = 64/432 (14%)

Query: 16  RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
           RL+ WL+ Q++S  YPGL W N EK +F IPW+HA +   +Q+ D +IFKAWA   GK+ 
Sbjct: 9   RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68

Query: 76  EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPED 135
           EG D+A+PA WK  LRCALNKS DF  + D  +    +PYK+Y +      P + Q  + 
Sbjct: 69  EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRI-----VPEEEQKCKL 122

Query: 136 YSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPY-SLLKEDVKWPPTLQPPTLRPPT 194
               AG   E  E    M    S  D +   P +  Y  ++K     P   +   L    
Sbjct: 123 GVATAGCVNEVTE----MECGRSEIDELIKEPSVDDYMGMIKRSPSPPEACRSQLLPDWW 178

Query: 195 LQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDL 254
            Q P+   P+V G    D                                          
Sbjct: 179 AQQPSTGVPLVTGYTTYD------------------------------------------ 196

Query: 255 LISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQ--LEATQEQVELFGPISLEQ 312
               H    + + I F Y G+     T + P GCRL  SQ  L  T    +L+GP  LE 
Sbjct: 197 ---AHHSAFSQMVISFYYGGKLVGQATTTCPEGCRLSLSQPGLPGT----KLYGPEGLEL 249

Query: 313 VRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDS 372
           VRFP  + IPS++QR  T +L   L+RG++L    Q ++  RLCQ +VF SG  A     
Sbjct: 250 VRFPPADAIPSERQRQVTRKLFGHLERGVLLHSSRQGVFVKRLCQGRVFCSGN-AVVCKG 308

Query: 373 CPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITV 432
            PN ++R+   ++F    F  EL  F   Q   P    +  CFGEE+PD  P   KLI V
Sbjct: 309 RPNKLERDEVVQVFDTSQFFRELQQFYNSQGRLPDG-RVVLCFGEEFPDMAPLRSKLILV 367

Query: 433 QVVPVAARLLLE 444
           Q+  +  R L E
Sbjct: 368 QIEQLYVRQLAE 379


>gi|4504725 interferon regulatory factor 3 [Homo sapiens]
          Length = 427

 Score =  169 bits (429), Expect = 4e-42
 Identities = 144/471 (30%), Positives = 207/471 (43%), Gaps = 79/471 (16%)

Query: 16  RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
           R+ PWLV+Q++  Q  G+ WVN  +  F IPW+H  R    Q+ D  IF+AWA+ TG Y 
Sbjct: 7   RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAEATGAYV 65

Query: 76  EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQP--P 133
            G D+ D   WK N R ALN+    RL  D  +D P  P+KIYE  ++G     SQP   
Sbjct: 66  PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFVNSGVGDF-SQPDTS 123

Query: 134 EDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLRPP 193
            D + G    + +E+ L  +L ++ L      GP           +   P   P  LR P
Sbjct: 124 PDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGP---------PSLAVAPEPCPQPLRSP 174

Query: 194 TLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPD 253
           +L  PT             P P   P  NP      L  +L PG                
Sbjct: 175 SLDNPT-------------PFPNLGPSENP------LKRLLVPG---------------- 199

Query: 254 LLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQV 313
                      + E+   YRGR     TIS P G RL  S++    ++     P++L   
Sbjct: 200 --------EEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEV---GDRTLPGWPVTL--- 245

Query: 314 RFPSPEDIPSDK-QRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDS 372
             P P    +D+    Y   +L  L  GL L   GQ L+A RL  C  +W    A + + 
Sbjct: 246 --PDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEEL 299

Query: 373 CPN-------PIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPR 425
            PN        + ++ +  +F L  F+ +LI F +G +   P + ++FC GE WP  +P 
Sbjct: 300 LPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPW 358

Query: 426 EKKLITVQVVPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 475
            K+L+ V+VVP   R L+EM   G  S   +++ L ISN        +Q+K
Sbjct: 359 TKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 409


>gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens]
          Length = 516

 Score =  164 bits (416), Expect = 1e-40
 Identities = 145/502 (28%), Positives = 211/502 (42%), Gaps = 86/502 (17%)

Query: 14  RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
           RV    WL+ +++S  Y GLQW++  +  F +PW+H  R   S+  D  IFKAWA   G+
Sbjct: 24  RVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSE-ADARIFKAWAVARGR 82

Query: 74  YTEG---------VDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIY----EV 120
           +             + A+ A WK N RCAL  +R F ++ D   D P  P+K+Y    E+
Sbjct: 83  WPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGD-PADPHKVYALSREL 141

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           C              +  G G ++ E E    + P        Q GP     +     ++
Sbjct: 142 C--------------WREGPGTDQTEAEAPAAVPPP-------QGGPPGPFLAHTHAGLQ 180

Query: 181 WPPTLQPPT-----LRPPTLQPPTLQPPVVLGPPAPDPSPLAPP---------------- 219
            P  L  P      L    +Q   L   ++      DP P   P                
Sbjct: 181 APGPLPAPAGDKGDLLLQAVQQSCLADHLLTASWGADPVPTKAPGEGQEGLPLTGACAGG 240

Query: 220 PGNPAGFRELLSEVLE----PGPLPASL-------PPAGEQLLPDLLISPHMLPLTD--- 265
           PG PAG  EL    +E    PGP PA+L       P +  Q  P L  SP          
Sbjct: 241 PGLPAG--ELYGWAVETTPSPGPQPAALTTGEAAAPESPHQAEPYLSPSPSACTAVQEPS 298

Query: 266 ---LEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIP 322
              L++   Y+GR      + +P  C   Y   +      +       +QV FPSP ++P
Sbjct: 299 PGALDVTIMYKGRTVLQKVVGHP-SCTFLYGPPDPAVRATDP------QQVAFPSPAELP 351

Query: 323 SDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFW--SGPCASAHDSCPN-PIQR 379
             KQ  YT +LL  +  GL L+L+G  L+A R+ +CKV+W   GP  SA  S P   + R
Sbjct: 352 DQKQLRYTEELLRHVAPGLHLELRGPQLWARRMGKCKVYWEVGGPPGSASPSTPACLLPR 411

Query: 380 EVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAA 439
              T +F    F  EL+ F+  Q    P + I+  FG++    +P+EK L+ V++ P   
Sbjct: 412 NCDTPIFDFRVFFQELVEFRARQRRGSPRYTIYLGFGQDLSAGRPKEKSLVLVKLEPWLC 471

Query: 440 RLLLEMFSGELSWSADSIRLQI 461
           R+ LE    E   S DS  L +
Sbjct: 472 RVHLEGTQREGVSSLDSSSLSL 493


>gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens]
          Length = 503

 Score =  164 bits (416), Expect = 1e-40
 Identities = 145/502 (28%), Positives = 211/502 (42%), Gaps = 86/502 (17%)

Query: 14  RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
           RV    WL+ +++S  Y GLQW++  +  F +PW+H  R   S+  D  IFKAWA   G+
Sbjct: 11  RVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSE-ADARIFKAWAVARGR 69

Query: 74  YTEG---------VDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIY----EV 120
           +             + A+ A WK N RCAL  +R F ++ D   D P  P+K+Y    E+
Sbjct: 70  WPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGD-PADPHKVYALSREL 128

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           C              +  G G ++ E E    + P        Q GP     +     ++
Sbjct: 129 C--------------WREGPGTDQTEAEAPAAVPPP-------QGGPPGPFLAHTHAGLQ 167

Query: 181 WPPTLQPPT-----LRPPTLQPPTLQPPVVLGPPAPDPSPLAPP---------------- 219
            P  L  P      L    +Q   L   ++      DP P   P                
Sbjct: 168 APGPLPAPAGDKGDLLLQAVQQSCLADHLLTASWGADPVPTKAPGEGQEGLPLTGACAGG 227

Query: 220 PGNPAGFRELLSEVLE----PGPLPASL-------PPAGEQLLPDLLISPHMLPLTD--- 265
           PG PAG  EL    +E    PGP PA+L       P +  Q  P L  SP          
Sbjct: 228 PGLPAG--ELYGWAVETTPSPGPQPAALTTGEAAAPESPHQAEPYLSPSPSACTAVQEPS 285

Query: 266 ---LEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIP 322
              L++   Y+GR      + +P  C   Y   +      +       +QV FPSP ++P
Sbjct: 286 PGALDVTIMYKGRTVLQKVVGHP-SCTFLYGPPDPAVRATDP------QQVAFPSPAELP 338

Query: 323 SDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFW--SGPCASAHDSCPN-PIQR 379
             KQ  YT +LL  +  GL L+L+G  L+A R+ +CKV+W   GP  SA  S P   + R
Sbjct: 339 DQKQLRYTEELLRHVAPGLHLELRGPQLWARRMGKCKVYWEVGGPPGSASPSTPACLLPR 398

Query: 380 EVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAA 439
              T +F    F  EL+ F+  Q    P + I+  FG++    +P+EK L+ V++ P   
Sbjct: 399 NCDTPIFDFRVFFQELVEFRARQRRGSPRYTIYLGFGQDLSAGRPKEKSLVLVKLEPWLC 458

Query: 440 RLLLEMFSGELSWSADSIRLQI 461
           R+ LE    E   S DS  L +
Sbjct: 459 RVHLEGTQREGVSSLDSSSLSL 480


>gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens]
          Length = 474

 Score =  157 bits (397), Expect = 2e-38
 Identities = 135/475 (28%), Positives = 201/475 (42%), Gaps = 61/475 (12%)

Query: 14  RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
           RV    WL+ +++S  Y GLQW++  +  F +PW+H  R   S+  D  IFKAWA   G+
Sbjct: 11  RVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSE-ADARIFKAWAVARGR 69

Query: 74  YTEG---------VDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIY----EV 120
           +             + A+ A WK N RCAL  +R F ++ D   D P  P+K+Y    E+
Sbjct: 70  WPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGD-PADPHKVYALSREL 128

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           C              +  G G ++ E E    + P        Q GP     +     ++
Sbjct: 129 C--------------WREGPGTDQTEAEAPAAVPPP-------QGGPPGPFLAHTHAGLQ 167

Query: 181 WPPTLQPPT-----LRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLE 235
            P  L  P      L    +Q   L   ++      DP P   P     G    L+    
Sbjct: 168 APGPLPAPAGDKGDLLLQAVQQSCLADHLLTASWGADPVPTKAPGEGQEGLP--LTGACA 225

Query: 236 PGPLPASLPPAGEQLLPDLLISPHMLPLTD------LEIKFQYRGRPPRALTISNPHGCR 289
            G   A+ P +  Q  P L  SP             L++   Y+GR      + +P  C 
Sbjct: 226 GGE--AAAPESPHQAEPYLSPSPSACTAVQEPSPGALDVTIMYKGRTVLQKVVGHP-SCT 282

Query: 290 LFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQD 349
             Y   +      +       +QV FPSP ++P  KQ  YT +LL  +  GL L+L+G  
Sbjct: 283 FLYGPPDPAVRATDP------QQVAFPSPAELPDQKQLRYTEELLRHVAPGLHLELRGPQ 336

Query: 350 LYAIRLCQCKVFW--SGPCASAHDSCPN-PIQREVKTKLFSLEHFLNELILFQKGQTNTP 406
           L+A R+ +CKV+W   GP  SA  S P   + R   T +F    F  EL+ F+  Q    
Sbjct: 337 LWARRMGKCKVYWEVGGPPGSASPSTPACLLPRNCDTPIFDFRVFFQELVEFRARQRRGS 396

Query: 407 PPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQI 461
           P + I+  FG++    +P+EK L+ V++ P   R+ LE    E   S DS  L +
Sbjct: 397 PRYTIYLGFGQDLSAGRPKEKSLVLVKLEPWLCRVHLEGTQREGVSSLDSSSLSL 451


>gi|25282407 interferon-stimulated transcription factor 3, gamma
           48kDa [Homo sapiens]
          Length = 393

 Score =  140 bits (352), Expect = 4e-33
 Identities = 121/435 (27%), Positives = 182/435 (41%), Gaps = 71/435 (16%)

Query: 16  RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
           +L+ W+V QV S Q+PG+ W +  K +F IPW+HA +    +D D   FKAWA   GKY 
Sbjct: 11  KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70

Query: 76  EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYE-----VCSNGPAPTDS 130
           EG D   PA WK  LRCALNKS +F+ + +  R    +PYK+Y+     + S  P     
Sbjct: 71  EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKV 129

Query: 131 QPPEDYSFGAGEEEEEEEELQRMLPSLS-LTDAVQSGPHMTPYSLLKEDVKWPPTLQPPT 189
                +S  + E +EEE+ +Q    S S L D++ +         +  D+          
Sbjct: 130 PSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDI---------- 179

Query: 190 LRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQ 249
                                   S  +P P           EV +        P  G+Q
Sbjct: 180 --------------------GSSSSSSSPEP----------QEVTD----TTEAPFQGDQ 205

Query: 250 LLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPIS 309
              + L+ P   P   L + F Y GR      + +   CRL      +           S
Sbjct: 206 RSLEFLLPPE--PDYSLLLTFIYNGRVVGEAQVQS-LDCRLVAEPSGSES---------S 253

Query: 310 LEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASA 369
           +EQV FP P  +        T +LL  L+RG+++    + L+  RLC   + W+ P A  
Sbjct: 254 MEQVLFPKPGPLEP------TQRLLSQLERGILVASNPRGLFVQRLCPIPISWNAPQAPP 307

Query: 370 HDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKL 429
               P+ +      +LF   +F  +L+ + +G    PP F++   F EE        + L
Sbjct: 308 GPG-PHLLPSNECVELFRTAYFCRDLVRYFQG-LGPPPKFQVTLNFWEESHGSSHTPQNL 365

Query: 430 ITVQVVPVAARLLLE 444
           ITV++    AR LLE
Sbjct: 366 ITVKMEQAFARYLLE 380


>gi|153082752 interferon regulatory factor 2 [Homo sapiens]
          Length = 349

 Score =  114 bits (286), Expect = 2e-25
 Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 11/173 (6%)

Query: 11  PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
           P  R+R++PWL  Q+NS   PGL+W+N EKK+F IPW HA RHG   + D  +F+ WA  
Sbjct: 2   PVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIH 61

Query: 71  TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDS 130
           TGK+  GVD+ DP  WKAN RCA+N   D   + D         +++Y +      P   
Sbjct: 62  TGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRM-----LPLSE 116

Query: 131 QPPEDYSFGAGEEEEEEEELQR--MLPSLSLTDAVQSGPHMTP-YSLLKEDVK 180
           +P +       E+E++ + +++  +  SL L++ V     ++P Y++L   +K
Sbjct: 117 RPSKKGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSD---LSPEYAVLTSTIK 166


>gi|4504721 interferon regulatory factor 1 [Homo sapiens]
          Length = 325

 Score =  109 bits (272), Expect = 7e-24
 Identities = 47/110 (42%), Positives = 67/110 (60%)

Query: 11  PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
           P  R+R++PWL  Q+NS Q PGL W+N E+ +F IPW+HA +HG   + D  +F++WA  
Sbjct: 2   PITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIH 61

Query: 71  TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           TG+Y  G  E DP  WKAN RCA+N   D   + D  R+      ++Y +
Sbjct: 62  TGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRM 111


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
           sapiens]
          Length = 5537

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 37/85 (43%), Positives = 43/85 (50%), Gaps = 11/85 (12%)

Query: 188 PTLRPPTLQPPTLQPPVVLGP-PAPDPSPLAPPPGNPAGFRELLSE--VLEPG-----PL 239
           P L  P L P   +PP   G  PAP+  PL PPPG P+    LL E  + EPG     PL
Sbjct: 853 PELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPS-LSPLLGEPALSEPGEPPLSPL 911

Query: 240 PASLP--PAGEQLLPDLLISPHMLP 262
           P  LP  P+GE  L   L+ P  LP
Sbjct: 912 PEELPLSPSGEPSLSPQLMPPDPLP 936



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 49/171 (28%), Positives = 67/171 (39%), Gaps = 18/171 (10%)

Query: 107 PRDMPPQPY-------KIYEVCSNGPAPTDS--QPPEDYSFGAGEEEEEEEELQRMLPSL 157
           P ++P  P        +  E     P P +S   PP + S  +  EE      +   PS 
Sbjct: 471 PEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSP 530

Query: 158 SLTDAVQSGPHMTPYSL-LKEDVKWPPTLQPPTLRPPT---LQPPTLQPPVVLGPPAPDP 213
           +L   +   P  +P S   +E    PP  + PT  PP    L PP  + P+    P P+ 
Sbjct: 531 ALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPM---SPPPEE 587

Query: 214 SPLAPPPGNPAGFRELLSEVLEPGP--LPASLPPAGEQLLPDLLISPHMLP 262
           SP++PPP     F       L P P   P S PP   +L P    SP   P
Sbjct: 588 SPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPP 638



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 52/175 (29%), Positives = 67/175 (38%), Gaps = 35/175 (20%)

Query: 97  SRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQ---PPEDYSFGAGEEEEEEE---EL 150
           SR F    + P   PP+   +       P P  S+   PPED       EE       E+
Sbjct: 597 SRLFPPFEESPLSPPPEESPL------SPPPEASRLSPPPEDSPMSPPPEESPMSPPPEV 650

Query: 151 QRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLRPPT---LQPPTLQPPVVLG 207
            R+ P L +   +   P  +P S        PP  + PT  PP    L PP    P    
Sbjct: 651 SRLSP-LPVVSRLSPPPEESPLS--------PPPEESPTSPPPEASRLSPPPEDSPT--- 698

Query: 208 PPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDLLISPHMLP 262
            P P+ SP +PPP +      L+S  LE  PL   LP   E  L      PH+ P
Sbjct: 699 SPPPEDSPASPPPED-----SLMSLPLEESPL---LPLPEEPQLCPRSEGPHLSP 745



 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 45/142 (31%), Positives = 62/142 (43%), Gaps = 16/142 (11%)

Query: 118  YEVC-SNGPAPTDSQPPEDYSFGAGEEEE--EEEELQRMLPSLSLTDAVQSG----PHMT 170
            YEV     PA   ++P +  + G G +E+  E +        L   DAV  G      + 
Sbjct: 4815 YEVLFPESPARAGTEPKKGEAEGPGGKEKGLEGKSPDTGPDWLKQFDAVLPGYTLKSQLD 4874

Query: 171  PYSLLKEDVKWPPTLQPPTLRPPTLQPPTLQPPVVLGPP----APDPSPLAPPPGNP--A 224
              SLLK++    P  +PPT    T     L    +  PP    +P PSPLAP P +P   
Sbjct: 4875 ILSLLKQE---SPAPEPPTQHSYTYNVSNLDVRQLSAPPPEEPSPPPSPLAPSPASPPTE 4931

Query: 225  GFRELLSEVLEPGPLPASLPPA 246
               EL +E L   P+P+ LP A
Sbjct: 4932 PLVELPTEPLAEPPVPSPLPLA 4953



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 55/204 (26%), Positives = 80/204 (39%), Gaps = 39/204 (19%)

Query: 92  CALNKSRDFRLIYDGPRDMPPQPYKIY-----EVCSNGPAPTDS----QPPEDYSFGAGE 142
           CA+ +        +GP  + PQP +++     E     P P +     QP E +     E
Sbjct: 780 CAVPEEPHLSPQAEGPH-LSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSE 838

Query: 143 E-----EEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLRPPTLQP 197
           E       EE  L   L    L+   +  P        +E  + P   + P   PP    
Sbjct: 839 EPCLSPRPEESHLSPELEKPPLSPRPEKPP--------EEPGQCPAPEELPLFPPPG--E 888

Query: 198 PTLQPPVVLGPPA---PDPSPLAPPPG----NPAGFRELLSEVLEPGPLPASLPPAGEQL 250
           P+L P  +LG PA   P   PL+P P     +P+G   L  +++ P PLP  L P     
Sbjct: 889 PSLSP--LLGEPALSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAA 946

Query: 251 LPDLLISPHMLPLTDLEIKFQYRG 274
            P     P + PL +LE  F  +G
Sbjct: 947 AP-----PALSPLGELEYPFGAKG 965



 Score = 39.3 bits (90), Expect = 0.009
 Identities = 50/185 (27%), Positives = 66/185 (35%), Gaps = 29/185 (15%)

Query: 107 PRDMPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEE----EEEELQRMLPSLSLTDA 162
           P + PP P  +    S  P  +   PP + S  +   EE       E  R+ P       
Sbjct: 523 PEESPPSP-ALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPE-ESP 580

Query: 163 VQSGPHMTPYSLLKEDVKWPPTLQPPTLRPPTLQPPTLQPPVV--LGPPAPDPSPLAPPP 220
           +   P  +P S   E  +  P  +   L PP  + P   PP    L PP P+ SP++PPP
Sbjct: 581 MSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPP-PEDSPMSPPP 639

Query: 221 G-------------NPAGFRELLSEVLEPGPL-------PASLPPAGEQLLPDLLISPHM 260
                         +P      LS   E  PL       P S PP   +L P    SP  
Sbjct: 640 EESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTS 699

Query: 261 LPLTD 265
            P  D
Sbjct: 700 PPPED 704



 Score = 35.8 bits (81), Expect = 0.096
 Identities = 45/150 (30%), Positives = 62/150 (41%), Gaps = 16/150 (10%)

Query: 139  GAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLRPPTLQPP 198
            GAG   +    L     +LS T  V    H TP     ++ K P  L  P+ + PT    
Sbjct: 4278 GAGPRPQGPPRLPAPPGALS-TGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPT---E 4333

Query: 199  TLQPPVVLGPPAPDPSPLAPPPG--NPAGFR---ELLSEVLEPGPLPASL----PPAGEQ 249
               PP   G P P    L PPPG  +PA  +    L S+ L P   P +L     P    
Sbjct: 4334 AQLPPTHPGTPKPQGPTLEPPPGRVSPAAAQLADTLFSKGLGPWDPPDNLAETQKPEQSS 4393

Query: 250  LLPDLL--ISPHMLP-LTDLEIKFQYRGRP 276
            L+P  L  ++  ++P  + L IK + R  P
Sbjct: 4394 LVPGHLDQVNGQVVPEASQLSIKQEPREEP 4423



 Score = 34.7 bits (78), Expect = 0.21
 Identities = 45/147 (30%), Positives = 55/147 (37%), Gaps = 24/147 (16%)

Query: 127  PTDSQPPEDYSFGAGEE--EEEEEELQRMLPS-----LSLTDAVQSGPHMTPYSLLKEDV 179
            P  S PP    FG   +  E ++EEL    PS     L   D+  SG H+    L   DV
Sbjct: 2271 PLLSPPP----FGESRKALEVKKEELGASSPSYGPPNLGFVDSPSSGTHLGGLELKTPDV 2326

Query: 180  KWPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPS-PLAP-PPGNPAGFR--ELLSEVLE 235
               P      L P   Q     P + L P  P P+  LAP PP +P  FR         +
Sbjct: 2327 FKAP------LTPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQ 2380

Query: 236  PGPLPASLPPAGEQLLPDLLISPHMLP 262
            P   P   PP  E       + P  LP
Sbjct: 2381 PPLTPRPQPPPPESC---CALPPRSLP 2404



 Score = 34.3 bits (77), Expect = 0.28
 Identities = 62/228 (27%), Positives = 83/228 (36%), Gaps = 36/228 (15%)

Query: 107 PRDMPP-QPYKIYEVCSNGPAP---TDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDA 162
           P D P  +P  +Y  C   P     T  QP E      G  + E + L +          
Sbjct: 377 PGDTPTDEPDALYVACQGQPKGGHVTSMQPKEP-----GPLQCEAKPLGKA--------G 423

Query: 163 VQSGPHMTPYSLLKEDVKWPPTLQPPTLRPPTLQPPTLQPPVV--LGPPAPDPSPLAPPP 220
           VQ  P +   + L E++   P  +   L PP  + PT  PP    L PP P+  P +P P
Sbjct: 424 VQLEPQLE--APLNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPP-PEELPASPLP 480

Query: 221 GNPAGFRELLSEVLEPGP--LPASLPPAGEQLLP--DLLISP--HMLPLTDLEIKFQYRG 274
                 R L    L P P   P S PP      P  +  +SP     P   LE       
Sbjct: 481 EALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPL---S 537

Query: 275 RPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIP 322
            PP A  +S P       S L    E++    P    ++  P PE+ P
Sbjct: 538 PPPEASPLSPP----FEESPLSPPPEELPTSPPPEASRLS-PPPEESP 580



 Score = 33.5 bits (75), Expect = 0.48
 Identities = 53/195 (27%), Positives = 72/195 (36%), Gaps = 44/195 (22%)

Query: 110  MPPQPYKIYEVCSNGPAPTDSQ---PPEDYSFGA--GE---EEEEEEELQRMLPSLSLTD 161
            + P+P K  E     PAP +     PP + S     GE    E  E  L  +   L L+ 
Sbjct: 860  LSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPALSEPGEPPLSPLPEELPLSP 919

Query: 162  AVQSGPHMTPYSLLKEDVKWPPTLQP--PTLRPPTLQP---------------------- 197
            + +  P ++P  +  + +  PP L P      PP L P                      
Sbjct: 920  SGE--PSLSPQLMPPDPL--PPPLSPIITAAAPPALSPLGELEYPFGAKGDSDPESPLAA 975

Query: 198  PTLQPPVVLGPPA----PDPSP---LAPPPGNPAG-FRELLSEVLEPGPLPASLPPAGEQ 249
            P L+ P+   P A    P+P P   L P PG+P G    +L E L P   P        Q
Sbjct: 976  PILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPILMEPLPPQCSPLLQHSLVPQ 1035

Query: 250  LLPDLLISPHMLPLT 264
              P    SP  LPL+
Sbjct: 1036 NSPPSQCSPPALPLS 1050



 Score = 31.2 bits (69), Expect = 2.4
 Identities = 31/95 (32%), Positives = 38/95 (40%), Gaps = 25/95 (26%)

Query: 181  WPPTLQPPTLRPPTLQP---------------PTLQPP------VVLGPPAPDPSPLAPP 219
            +P  +  P+L+PP  QP               PTL  P      V  G   P  SPL P 
Sbjct: 2538 FPQAVGEPSLKPPVPQPGLPPPHGINSHFGPGPTLGKPQSTNYTVATGNFHPSGSPLGPS 2597

Query: 220  PGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDL 254
             G+  G    LS +  P  LP   PPA +  LP L
Sbjct: 2598 SGS-TGESYGLSPLRPPSVLP---PPAPDGSLPYL 2628


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
           sapiens]
          Length = 2715

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 12/84 (14%)

Query: 141 GEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLRPPTLQPPTL 200
           GEE+EE    + M+P+    +A    P +TP +        PP L PP+  PP   PP  
Sbjct: 378 GEEKEERAVAEEMMPAAEKEEAKLPPPPLTPPAPSP-----PPPLPPPSTSPP---PPLC 429

Query: 201 QPPVVLGPPAPDPSPLAPPPGNPA 224
            PP    PP   P PL  PP  PA
Sbjct: 430 PPP----PPPVSPPPLPSPPPPPA 449



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 48/166 (28%), Positives = 62/166 (37%), Gaps = 34/166 (20%)

Query: 125 PAPTDSQ----PPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           P PT S     PPED    A +     + +++ +  + +  A  S    TP   + ED  
Sbjct: 495 PTPTPSTATGGPPEDSPTVAPKSTTFLKNIRQFI--MPVVSARSSRVIKTPRRFMDEDPP 552

Query: 181 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPS-PLAP-PPGNPAGFRELLSEVLE--- 235
            PP ++      P L+PP    P V   PAP PS P AP PP  P    E    +L    
Sbjct: 553 KPPKVEVS----PVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRRSILREPT 608

Query: 236 ----------------PGPLPASLP---PAGEQLLPDLLISPHMLP 262
                           P P PA  P   PA     P LL +P   P
Sbjct: 609 FRWTSLTRELPPPPPAPPPPPAPSPPPAPATSSRRPLLLRAPQFTP 654



 Score = 32.0 bits (71), Expect = 1.4
 Identities = 28/109 (25%), Positives = 34/109 (31%), Gaps = 3/109 (2%)

Query: 110 MPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHM 169
           + P P    E     P P D  P E      G        L R  P ++     +  PH 
Sbjct: 666 LTPPPLGAPEAPEPEPPPADDSPAEPEPRAVGRTNHLS--LPRFAPVVTTPVKAEVSPHG 723

Query: 170 TPYSLLKEDVKWPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAP 218
            P +L          LQP       L P  L PP     P P P  + P
Sbjct: 724 AP-ALSNGPQTQAQLLQPLQALQTQLLPQALPPPQPQLQPPPSPQQMPP 771



 Score = 29.6 bits (65), Expect = 6.9
 Identities = 47/192 (24%), Positives = 63/192 (32%), Gaps = 46/192 (23%)

Query: 106  GPRDMPP--QPYKIYEVCSNGPAPTDS-----QPPEDYSFGAGEEEEEEEELQRMLPSL- 157
            GPR+ P   +  +  +   + PAP+        PP D         E    +Q + P L 
Sbjct: 1787 GPREEPAHLEAAEENQTIVHSPAPSSEPPGGEDPPLDTDVLVPGAPERHSPIQNLDPPLR 1846

Query: 158  ------------SLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLRPPTLQPPTLQPPVV 205
                        S + A    P+ +P       V + P   P +    T   PT+  P  
Sbjct: 1847 PDSGSAPPPAPRSFSGARIKVPNYSPSRRPLGGVSFGPLPSPGSPSSLTHHIPTVGDPDF 1906

Query: 206  LGPPAPD--PSPLAP--PPGNPAG--------------------FRELLSEVLEPGPLPA 241
              PP     PSPLAP  PP   A                           E+  PGP P+
Sbjct: 1907 PAPPRRSRRPSPLAPRPPPSRWASPPLKTSPQLRVPPPTSVVTALTPTSGELAPPGPAPS 1966

Query: 242  SLPPAGEQLLPD 253
              PP  E L PD
Sbjct: 1967 --PPPPEDLGPD 1976


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 23/87 (26%)

Query: 192 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLE---------------- 235
           PP L PP   PP+   PP   P P  PPP +PA   + L+ VLE                
Sbjct: 772 PPALPPP---PPLAKFPPPSQPQPPPPPPPSPASLLKSLASVLEGQKYCYRGTGAAVSTR 828

Query: 236 PGPLPASL----PPAGEQLLPDLLISP 258
           PGPLP +     PP+G   LP    +P
Sbjct: 829 PGPLPTTQYSPGPPSGATALPPTSAAP 855



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 38/150 (25%), Positives = 54/150 (36%), Gaps = 25/150 (16%)

Query: 106 GPRDMPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQS 165
           GP   PP PY    +      P+ +Q P+D                   P + LT A+  
Sbjct: 567 GPVSFPPPPYLARSIDPLPRPPSPAQNPQD------------------PPLVPLTLALPP 608

Query: 166 GPHMTPYSLLKEDVKWPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGN-PA 224
            P  + +       + P + +P    P T   P + P    GP +  P P+ P  G  PA
Sbjct: 609 APPSSCHQNTSGSFRRPESPRPRVSFPKT---PEVGPGPPPGPLSKAPQPVPPGVGELPA 665

Query: 225 GFRELLSEVLEPGPLPASL-PPAGEQLLPD 253
               L      P PL      PA  ++LPD
Sbjct: 666 RGPRLFD--FPPTPLEDQFEEPAEFKILPD 693


>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
           [Homo sapiens]
          Length = 1125

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 45/165 (27%), Positives = 63/165 (38%), Gaps = 23/165 (13%)

Query: 113 QPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPY 172
           +P ++   C  G   +D+  P+   +    ++ E E  Q      S T+ V   P   P 
Sbjct: 608 KPEELESFCEGGMLDSDTLNPD---WKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPV 664

Query: 173 SLLKEDVKWPPTLQPPTLRPP--------TLQPPTLQPPVVLGPPAPDPSPLAPPPGNP- 223
            +    V  P T+ PP + P          LQPP   PP+ + PP   P    PPP  P 
Sbjct: 665 PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPF 724

Query: 224 --AGFR--ELLSEVLEPGPLPASLPPAGEQLLPDLLISPHMLPLT 264
              GF    L    L PGP P   PP         +  PH  P++
Sbjct: 725 LRPGFNPMHLPPGFLPPGPPPPITPPVS-------IPPPHTPPIS 762



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 9/70 (12%)

Query: 183 PTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPAS 242
           P  +PP + PP LQ   L PP    P  P      PPPG P GF      +  P  +   
Sbjct: 836 PLQRPPGMPPPHLQRFPLMPP---RPMPPHMMHRGPPPG-PGGF-----AMPPPHGMKGP 886

Query: 243 LPPAGEQLLP 252
            PP G  + P
Sbjct: 887 FPPHGPFVRP 896



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 37/153 (24%), Positives = 51/153 (33%), Gaps = 57/153 (37%)

Query: 182 PPTLQPPTLRPPTLQPPTLQPPVVLG------------------PPAPDPSPLAPPPGNP 223
           PP + PP   PP   PP   P +V G                  PPA   +   PP   P
Sbjct: 744 PPPITPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQP 803

Query: 224 AGFRELLSEVLEPGPL----------------------PASLPPAGEQ---LLPDLLISP 258
                L ++ + PGP+                      P  +PP   Q   L+P   + P
Sbjct: 804 VSL--LGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPP 861

Query: 259 HMLPLTDLEIKFQYRGRP--PRALTISNPHGCR 289
           HM+          +RG P  P    +  PHG +
Sbjct: 862 HMM----------HRGPPPGPGGFAMPPPHGMK 884



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 8/77 (10%)

Query: 182 PPTLQP---PTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPP---PGNPAGFRELLSEVLE 235
           PP L+P   P   PP   PP   PP+   PP   P P  PP   P   +G R        
Sbjct: 722 PPFLRPGFNPMHLPPGFLPPGPPPPIT--PPVSIPPPHTPPISIPNLVSGARGNAESGDS 779

Query: 236 PGPLPASLPPAGEQLLP 252
                +++PPA    LP
Sbjct: 780 VKMYGSAVPPAAPTNLP 796


>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
           [Homo sapiens]
          Length = 1132

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 45/165 (27%), Positives = 63/165 (38%), Gaps = 23/165 (13%)

Query: 113 QPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPY 172
           +P ++   C  G   +D+  P+   +    ++ E E  Q      S T+ V   P   P 
Sbjct: 593 KPEELESFCEGGMLDSDTLNPD---WKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPV 649

Query: 173 SLLKEDVKWPPTLQPPTLRPP--------TLQPPTLQPPVVLGPPAPDPSPLAPPPGNP- 223
            +    V  P T+ PP + P          LQPP   PP+ + PP   P    PPP  P 
Sbjct: 650 PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPF 709

Query: 224 --AGFR--ELLSEVLEPGPLPASLPPAGEQLLPDLLISPHMLPLT 264
              GF    L    L PGP P   PP         +  PH  P++
Sbjct: 710 LRPGFNPMHLPPGFLPPGPPPPITPPVS-------IPPPHTPPIS 747



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 4/62 (6%)

Query: 182 PPTLQPPTLRPPTLQPPTLQPPVVL--GPPAPDPSPLA-PPPGNPAGFRELLSEVLEPGP 238
           PP + PP L+   L PP   PP ++  GPP P P   A PPP    G        + PG 
Sbjct: 847 PPGMPPPHLQRFPLMPPRPMPPHMMHRGPP-PGPGGFAMPPPHGMKGPFPPHGPFVRPGG 905

Query: 239 LP 240
           +P
Sbjct: 906 MP 907



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 10/67 (14%)

Query: 182 PPTLQP---PTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNP----AGFRELLSEVL 234
           PP L+P   P   PP   PP   PP+   PP   P P  PP   P    AG  E  ++ L
Sbjct: 707 PPFLRPGFNPMHLPPGFLPPGPPPPIT--PPVSIPPPHTPPISIPNSTIAGINEDTTKDL 764

Query: 235 EPG-PLP 240
             G P+P
Sbjct: 765 SIGNPIP 771



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 9/70 (12%)

Query: 183 PTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPAS 242
           P  +PP + PP LQ   L PP    P  P      PPPG P GF      +  P  +   
Sbjct: 843 PLQRPPGMPPPHLQRFPLMPP---RPMPPHMMHRGPPPG-PGGF-----AMPPPHGMKGP 893

Query: 243 LPPAGEQLLP 252
            PP G  + P
Sbjct: 894 FPPHGPFVRP 903



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 20/120 (16%)

Query: 177 EDVKWPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSP---LAPPPGNPAGFRELLSEV 233
           + VK   +  PP        PP  QP  +LG     P P   L  P     G R  L  +
Sbjct: 785 DSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPL 844

Query: 234 LEPGPLPASLPPAGEQ--LLPDLLISPHMLPLTDLEIKFQYRGRP--PRALTISNPHGCR 289
             P  +P   PP  ++  L+P   + PHM+          +RG P  P    +  PHG +
Sbjct: 845 QRPPGMP---PPHLQRFPLMPPRPMPPHMM----------HRGPPPGPGGFAMPPPHGMK 891


>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
           [Homo sapiens]
          Length = 1147

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 45/165 (27%), Positives = 63/165 (38%), Gaps = 23/165 (13%)

Query: 113 QPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPY 172
           +P ++   C  G   +D+  P+   +    ++ E E  Q      S T+ V   P   P 
Sbjct: 608 KPEELESFCEGGMLDSDTLNPD---WKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPV 664

Query: 173 SLLKEDVKWPPTLQPPTLRPP--------TLQPPTLQPPVVLGPPAPDPSPLAPPPGNP- 223
            +    V  P T+ PP + P          LQPP   PP+ + PP   P    PPP  P 
Sbjct: 665 PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPF 724

Query: 224 --AGFR--ELLSEVLEPGPLPASLPPAGEQLLPDLLISPHMLPLT 264
              GF    L    L PGP P   PP         +  PH  P++
Sbjct: 725 LRPGFNPMHLPPGFLPPGPPPPITPPVS-------IPPPHTPPIS 762



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 4/62 (6%)

Query: 182 PPTLQPPTLRPPTLQPPTLQPPVVL--GPPAPDPSPLA-PPPGNPAGFRELLSEVLEPGP 238
           PP + PP L+   L PP   PP ++  GPP P P   A PPP    G        + PG 
Sbjct: 862 PPGMPPPHLQRFPLMPPRPMPPHMMHRGPP-PGPGGFAMPPPHGMKGPFPPHGPFVRPGG 920

Query: 239 LP 240
           +P
Sbjct: 921 MP 922



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 10/67 (14%)

Query: 182 PPTLQP---PTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNP----AGFRELLSEVL 234
           PP L+P   P   PP   PP   PP+   PP   P P  PP   P    AG  E  ++ L
Sbjct: 722 PPFLRPGFNPMHLPPGFLPPGPPPPIT--PPVSIPPPHTPPISIPNSTIAGINEDTTKDL 779

Query: 235 EPG-PLP 240
             G P+P
Sbjct: 780 SIGNPIP 786



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 9/70 (12%)

Query: 183 PTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPAS 242
           P  +PP + PP LQ   L PP    P  P      PPPG P GF      +  P  +   
Sbjct: 858 PLQRPPGMPPPHLQRFPLMPP---RPMPPHMMHRGPPPG-PGGF-----AMPPPHGMKGP 908

Query: 243 LPPAGEQLLP 252
            PP G  + P
Sbjct: 909 FPPHGPFVRP 918



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 20/120 (16%)

Query: 177 EDVKWPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSP---LAPPPGNPAGFRELLSEV 233
           + VK   +  PP        PP  QP  +LG     P P   L  P     G R  L  +
Sbjct: 800 DSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPL 859

Query: 234 LEPGPLPASLPPAGEQ--LLPDLLISPHMLPLTDLEIKFQYRGRP--PRALTISNPHGCR 289
             P  +P   PP  ++  L+P   + PHM+          +RG P  P    +  PHG +
Sbjct: 860 QRPPGMP---PPHLQRFPLMPPRPMPPHMM----------HRGPPPGPGGFAMPPPHGMK 906


>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
          Length = 1012

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 47/181 (25%), Positives = 66/181 (36%), Gaps = 43/181 (23%)

Query: 111 PPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRM----------------- 153
           PPQP+ +    S G AP  + P   Y   + +    +  LQ                   
Sbjct: 314 PPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPH 373

Query: 154 --------LPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLRP----PTLQPPTLQ 201
                   +P L    A +  PH++  S    +   PP   PP L+P     T  PP+  
Sbjct: 374 IKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPP---PPALKPLSSLSTHHPPSAH 430

Query: 202 PPVVLGPPAPDPSPLAP--PPGNPAGFRELLSEVLEPGPLPASLPPAG-EQLLPDLLISP 258
           PP +   P   P P +P  PPG        L++     P PAS PP G  Q+ P    + 
Sbjct: 431 PPPLQLMPQSQPLPSSPAQPPG--------LTQSQNLPPPPASHPPTGLHQVAPQPPFAQ 482

Query: 259 H 259
           H
Sbjct: 483 H 483



 Score = 35.8 bits (81), Expect = 0.096
 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 6/84 (7%)

Query: 182 PPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLA---PPPGNPAGFRELLSEVLEPGP 238
           PP LQ PT   P    P+  PP     P P P+P A   PP G+P   +          P
Sbjct: 184 PPALQAPTGVTPA---PSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP 240

Query: 239 LPASLPPAGEQLLPDLLISPHMLP 262
           +P +       L P    SPH  P
Sbjct: 241 VPHTHIQQAPALHPQRPPSPHPPP 264



 Score = 35.4 bits (80), Expect = 0.13
 Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 165 SGPHMTPYSLLKEDVKWPPTLQPPT-LRPPTLQPPTLQPPVVLGPPAPDPSPLAP----P 219
           S P   P     +++  PP   PPT L     QPP  Q P V G P P   P  P    P
Sbjct: 445 SSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTP 504

Query: 220 PGNP 223
           P  P
Sbjct: 505 PAGP 508



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 10/49 (20%)

Query: 201 QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPA--SLPPAG 247
           QPP +  P    P+P + PPG P        ++  PGP P+  ++PP G
Sbjct: 183 QPPALQAPTGVTPAPSSAPPGTP--------QLPTPGPTPSATAVPPQG 223



 Score = 29.6 bits (65), Expect = 6.9
 Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 21/130 (16%)

Query: 155 PSLSLTDAVQSGPHMTPYSLLKEDVKWPPT-LQPPTLR-------PPTLQPPT------L 200
           P  SL+       H  P  L+ +    P +  QPP L        PP   PPT       
Sbjct: 417 PLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAP 476

Query: 201 QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP-AGEQLLPDLLISPH 259
           QPP    P  P   P   PP  P+      +     GP  ++ PP +G       +    
Sbjct: 477 QPPFAQHPFVPGGPPPITPPTCPS------TSTPPAGPGTSAQPPCSGAAASGGSIAGGS 530

Query: 260 MLPLTDLEIK 269
             PL  ++IK
Sbjct: 531 SCPLPTVQIK 540


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 47/181 (25%), Positives = 66/181 (36%), Gaps = 43/181 (23%)

Query: 111  PPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRM----------------- 153
            PPQP+ +    S G AP  + P   Y   + +    +  LQ                   
Sbjct: 868  PPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPH 927

Query: 154  --------LPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLRP----PTLQPPTLQ 201
                    +P L    A +  PH++  S    +   PP   PP L+P     T  PP+  
Sbjct: 928  IKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPP---PPALKPLSSLSTHHPPSAH 984

Query: 202  PPVVLGPPAPDPSPLAP--PPGNPAGFRELLSEVLEPGPLPASLPPAG-EQLLPDLLISP 258
            PP +   P   P P +P  PPG        L++     P PAS PP G  Q+ P    + 
Sbjct: 985  PPPLQLMPQSQPLPSSPAQPPG--------LTQSQNLPPPPASHPPTGLHQVAPQPPFAQ 1036

Query: 259  H 259
            H
Sbjct: 1037 H 1037



 Score = 35.8 bits (81), Expect = 0.096
 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 6/84 (7%)

Query: 182 PPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLA---PPPGNPAGFRELLSEVLEPGP 238
           PP LQ PT   P    P+  PP     P P P+P A   PP G+P   +          P
Sbjct: 738 PPALQAPTGVTPA---PSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP 794

Query: 239 LPASLPPAGEQLLPDLLISPHMLP 262
           +P +       L P    SPH  P
Sbjct: 795 VPHTHIQQAPALHPQRPPSPHPPP 818



 Score = 35.4 bits (80), Expect = 0.13
 Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 165  SGPHMTPYSLLKEDVKWPPTLQPPT-LRPPTLQPPTLQPPVVLGPPAPDPSPLAP----P 219
            S P   P     +++  PP   PPT L     QPP  Q P V G P P   P  P    P
Sbjct: 999  SSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTP 1058

Query: 220  PGNP 223
            P  P
Sbjct: 1059 PAGP 1062



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 10/49 (20%)

Query: 201 QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPA--SLPPAG 247
           QPP +  P    P+P + PPG P        ++  PGP P+  ++PP G
Sbjct: 737 QPPALQAPTGVTPAPSSAPPGTP--------QLPTPGPTPSATAVPPQG 777



 Score = 29.6 bits (65), Expect = 6.9
 Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 21/130 (16%)

Query: 155  PSLSLTDAVQSGPHMTPYSLLKEDVKWPPT-LQPPTLR-------PPTLQPPT------L 200
            P  SL+       H  P  L+ +    P +  QPP L        PP   PPT       
Sbjct: 971  PLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAP 1030

Query: 201  QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP-AGEQLLPDLLISPH 259
            QPP    P  P   P   PP  P+      +     GP  ++ PP +G       +    
Sbjct: 1031 QPPFAQHPFVPGGPPPITPPTCPS------TSTPPAGPGTSAQPPCSGAAASGGSIAGGS 1084

Query: 260  MLPLTDLEIK 269
              PL  ++IK
Sbjct: 1085 SCPLPTVQIK 1094


>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 47/181 (25%), Positives = 66/181 (36%), Gaps = 43/181 (23%)

Query: 111  PPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRM----------------- 153
            PPQP+ +    S G AP  + P   Y   + +    +  LQ                   
Sbjct: 868  PPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPH 927

Query: 154  --------LPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLRP----PTLQPPTLQ 201
                    +P L    A +  PH++  S    +   PP   PP L+P     T  PP+  
Sbjct: 928  IKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPP---PPALKPLSSLSTHHPPSAH 984

Query: 202  PPVVLGPPAPDPSPLAP--PPGNPAGFRELLSEVLEPGPLPASLPPAG-EQLLPDLLISP 258
            PP +   P   P P +P  PPG        L++     P PAS PP G  Q+ P    + 
Sbjct: 985  PPPLQLMPQSQPLPSSPAQPPG--------LTQSQNLPPPPASHPPTGLHQVAPQPPFAQ 1036

Query: 259  H 259
            H
Sbjct: 1037 H 1037



 Score = 35.8 bits (81), Expect = 0.096
 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 6/84 (7%)

Query: 182 PPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLA---PPPGNPAGFRELLSEVLEPGP 238
           PP LQ PT   P    P+  PP     P P P+P A   PP G+P   +          P
Sbjct: 738 PPALQAPTGVTPA---PSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP 794

Query: 239 LPASLPPAGEQLLPDLLISPHMLP 262
           +P +       L P    SPH  P
Sbjct: 795 VPHTHIQQAPALHPQRPPSPHPPP 818



 Score = 35.4 bits (80), Expect = 0.13
 Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 165  SGPHMTPYSLLKEDVKWPPTLQPPT-LRPPTLQPPTLQPPVVLGPPAPDPSPLAP----P 219
            S P   P     +++  PP   PPT L     QPP  Q P V G P P   P  P    P
Sbjct: 999  SSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTP 1058

Query: 220  PGNP 223
            P  P
Sbjct: 1059 PAGP 1062



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 10/49 (20%)

Query: 201 QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPA--SLPPAG 247
           QPP +  P    P+P + PPG P        ++  PGP P+  ++PP G
Sbjct: 737 QPPALQAPTGVTPAPSSAPPGTP--------QLPTPGPTPSATAVPPQG 777



 Score = 29.6 bits (65), Expect = 6.9
 Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 21/130 (16%)

Query: 155  PSLSLTDAVQSGPHMTPYSLLKEDVKWPPT-LQPPTLR-------PPTLQPPT------L 200
            P  SL+       H  P  L+ +    P +  QPP L        PP   PPT       
Sbjct: 971  PLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAP 1030

Query: 201  QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPP-AGEQLLPDLLISPH 259
            QPP    P  P   P   PP  P+      +     GP  ++ PP +G       +    
Sbjct: 1031 QPPFAQHPFVPGGPPPITPPTCPS------TSTPPAGPGTSAQPPCSGAAASGGSIAGGS 1084

Query: 260  MLPLTDLEIK 269
              PL  ++IK
Sbjct: 1085 SCPLPTVQIK 1094


>gi|7706501 WW domain binding protein 11 [Homo sapiens]
          Length = 641

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 40/155 (25%), Positives = 55/155 (35%), Gaps = 44/155 (28%)

Query: 127 PTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSL-------TDAVQSGPHMTPYSLLKEDV 179
           P + +  E++S    E++ ++ E ++              T    S     P S+    +
Sbjct: 343 PEEGREVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQI 402

Query: 180 KWPPTLQPPTLRPPTLQP-------------------PTLQPPVVLG---------PPAP 211
           + PP   PP L PP   P                   P L+PP + G         PP P
Sbjct: 403 QAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGP 462

Query: 212 DPS-PLAPPPGNPAGFRELLSEVLEPGPLPASLPP 245
            P  P  PPPG P G        L PGP P   PP
Sbjct: 463 PPGRPPGPPPGPPPG--------LPPGPPPRGPPP 489



 Score = 38.1 bits (87), Expect = 0.019
 Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 22/90 (24%)

Query: 182 PPTLQPPTLRPPTLQ-------------PPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRE 228
           PP   PP LRPP +              PP  +PP   GPP P P P  PP   P G   
Sbjct: 434 PPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPP---GPP-PGPPPGLPPGPPPRGPPP 489

Query: 229 LLSEVLEPGPLPASLPPAGEQLLPDLLISP 258
            L     P P P  +PP    ++   L+ P
Sbjct: 490 RL-----PPPAPPGIPPPRPGMMRPPLVPP 514



 Score = 37.4 bits (85), Expect = 0.033
 Identities = 29/83 (34%), Positives = 34/83 (40%), Gaps = 13/83 (15%)

Query: 182 PPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEP----- 236
           PP  +PP   PP   PP L P    GPP   P P  PPP  P G       ++ P     
Sbjct: 462 PPPGRPPG--PPPGPPPGLPP----GPPPRGPPPRLPPPA-PPGIPPPRPGMMRPPLVPP 514

Query: 237 -GPLPASLPPAGEQLLPDLLISP 258
            GP P  L P      P +L +P
Sbjct: 515 LGPAPPGLFPPAPLPNPGVLSAP 537



 Score = 37.0 bits (84), Expect = 0.043
 Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 9/71 (12%)

Query: 182 PPTLQPPTLRP---PTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGP 238
           PP   PP L P   P   PP L PP   G P P P  + PP   P G       +  P P
Sbjct: 470 PPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLG--PAPPGLFPPAP 527

Query: 239 LP----ASLPP 245
           LP     S PP
Sbjct: 528 LPNPGVLSAPP 538


>gi|24497513 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 46/151 (30%), Positives = 58/151 (38%), Gaps = 22/151 (14%)

Query: 104 YDGPRDMPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAV 163
           YD        PY+     +NG A   +Q P   S   G + E         P+ SL    
Sbjct: 7   YDSSAIYGGYPYQ----AANGFAYNANQQPYPASAALGADGEYHR------PACSLQSPS 56

Query: 164 QSGPHMTPYSL-------LKEDVKWPPTLQPPTLRPPTLQ--PPTLQPPVVLGPPAPDPS 214
            +G H   + L       L      PP+L  P L PP  Q  PP  QPP    P  P P+
Sbjct: 57  SAGGHPKAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQP-APQPPAPT 115

Query: 215 PLAPPPGNPAGFRELLSEVLEPGPLPASLPP 245
           P APPP + A   +  S    P P  A+  P
Sbjct: 116 PAAPPPPSSASPPQNASN--NPTPANAAKSP 144


>gi|13562112 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 46/151 (30%), Positives = 58/151 (38%), Gaps = 22/151 (14%)

Query: 104 YDGPRDMPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAV 163
           YD        PY+     +NG A   +Q P   S   G + E         P+ SL    
Sbjct: 7   YDSSAIYGGYPYQ----AANGFAYNANQQPYPASAALGADGEYHR------PACSLQSPS 56

Query: 164 QSGPHMTPYSL-------LKEDVKWPPTLQPPTLRPPTLQ--PPTLQPPVVLGPPAPDPS 214
            +G H   + L       L      PP+L  P L PP  Q  PP  QPP    P  P P+
Sbjct: 57  SAGGHPKAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQP-APQPPAPT 115

Query: 215 PLAPPPGNPAGFRELLSEVLEPGPLPASLPP 245
           P APPP + A   +  S    P P  A+  P
Sbjct: 116 PAAPPPPSSASPPQNASN--NPTPANAAKSP 144


>gi|157168329 formin 1 [Homo sapiens]
          Length = 1196

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 27/67 (40%), Positives = 28/67 (41%), Gaps = 11/67 (16%)

Query: 182 PPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPS---PLAPPPGNPAGFRELLSEVLEPGP 238
           PP    P L PP   PP L PP   GPP P P    P +P P NP G          P P
Sbjct: 672 PPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGG--------PPPAP 723

Query: 239 LPASLPP 245
            P  L P
Sbjct: 724 PPPGLAP 730



 Score = 39.3 bits (90), Expect = 0.009
 Identities = 23/64 (35%), Positives = 25/64 (39%)

Query: 184 TLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASL 243
           +L P    PP    P L PP    PP P PS   PPP  P            PG  P + 
Sbjct: 664 SLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAP 723

Query: 244 PPAG 247
           PP G
Sbjct: 724 PPPG 727



 Score = 36.2 bits (82), Expect = 0.073
 Identities = 29/97 (29%), Positives = 34/97 (35%), Gaps = 12/97 (12%)

Query: 125 PAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPT 184
           P P    PP     G G            L        V +GP + P       +  P +
Sbjct: 647 PPPASIPPPPPLPSGLGS-----------LSPAPPMPPVSAGPPLPPPPPPPPPLPPPSS 695

Query: 185 LQPPTLRPPTLQPPTLQPPVVLGPPAPDPSP-LAPPP 220
             PP   PP   P +  PP   GPP   P P LAPPP
Sbjct: 696 AGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPP 732


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.138    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,246,063
Number of Sequences: 37866
Number of extensions: 1795940
Number of successful extensions: 19840
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 734
Number of HSP's that attempted gapping in prelim test: 11444
Number of HSP's gapped (non-prelim): 4934
length of query: 514
length of database: 18,247,518
effective HSP length: 107
effective length of query: 407
effective length of database: 14,195,856
effective search space: 5777713392
effective search space used: 5777713392
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.