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Search of human proteins with 148612857
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148612857 sickle tail isoform 3 [Homo sapiens]
(1309 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148612857 sickle tail isoform 3 [Homo sapiens] 2605 0.0
gi|148612813 sickle tail isoform 2 [Homo sapiens] 2425 0.0
gi|50843820 sickle tail isoform 1 [Homo sapiens] 2181 0.0
gi|115334682 SNAP25-interacting protein [Homo sapiens] 617 e-176
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 73 2e-12
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 67 1e-10
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 64 7e-10
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 64 7e-10
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 62 5e-09
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 59 3e-08
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 57 9e-08
gi|41281612 zinc finger protein 828 [Homo sapiens] 57 9e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 57 9e-08
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 57 1e-07
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 57 1e-07
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 57 1e-07
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 57 1e-07
gi|18959210 WIRE protein [Homo sapiens] 57 1e-07
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 56 2e-07
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 56 2e-07
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 56 2e-07
gi|33946327 nucleoporin 214kDa [Homo sapiens] 56 3e-07
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 56 3e-07
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 56 3e-07
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 56 3e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 56 3e-07
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 56 3e-07
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 56 3e-07
gi|54860079 nadrin isoform 1 [Homo sapiens] 55 3e-07
gi|54860105 nadrin isoform 2 [Homo sapiens] 55 4e-07
>gi|148612857 sickle tail isoform 3 [Homo sapiens]
Length = 1309
Score = 2605 bits (6752), Expect = 0.0
Identities = 1309/1309 (100%), Positives = 1309/1309 (100%)
Query: 1 MEENESQKCEPCLPYSADRRQMQEQGKGNLHVTSPEDAECRRTKERLSNGNSRGSVSKSS 60
MEENESQKCEPCLPYSADRRQMQEQGKGNLHVTSPEDAECRRTKERLSNGNSRGSVSKSS
Sbjct: 1 MEENESQKCEPCLPYSADRRQMQEQGKGNLHVTSPEDAECRRTKERLSNGNSRGSVSKSS 60
Query: 61 RNIPRRHTLGGPRSSKEILGMQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTR 120
RNIPRRHTLGGPRSSKEILGMQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTR
Sbjct: 61 RNIPRRHTLGGPRSSKEILGMQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTR 120
Query: 121 SPKLSHSPQPPSLGDPVEHLSETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTK 180
SPKLSHSPQPPSLGDPVEHLSETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTK
Sbjct: 121 SPKLSHSPQPPSLGDPVEHLSETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTK 180
Query: 181 ERSLGVLYLQYGDETKQLRMPNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDES 240
ERSLGVLYLQYGDETKQLRMPNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDES
Sbjct: 181 ERSLGVLYLQYGDETKQLRMPNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDES 240
Query: 241 RNVYYELNDVRNIQDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRP 300
RNVYYELNDVRNIQDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRP
Sbjct: 241 RNVYYELNDVRNIQDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRP 300
Query: 301 GSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPI 360
GSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPI
Sbjct: 301 GSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPI 360
Query: 361 SPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDH 420
SPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDH
Sbjct: 361 SPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDH 420
Query: 421 IIAYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSD 480
IIAYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSD
Sbjct: 421 IIAYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSD 480
Query: 481 LRMIDMHAHYNAHGPPHTMQPDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPL 540
LRMIDMHAHYNAHGPPHTMQPDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPL
Sbjct: 481 LRMIDMHAHYNAHGPPHTMQPDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPL 540
Query: 541 MEKQVFAYSTATIPKDRETSEKMMKTTANRNHTDSAGTPHVSGGKMLSALESTVPPSQPP 600
MEKQVFAYSTATIPKDRETSEKMMKTTANRNHTDSAGTPHVSGGKMLSALESTVPPSQPP
Sbjct: 541 MEKQVFAYSTATIPKDRETSEKMMKTTANRNHTDSAGTPHVSGGKMLSALESTVPPSQPP 600
Query: 601 PVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKKAELEISGKVMETMKR 660
PVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKKAELEISGKVMETMKR
Sbjct: 601 PVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKKAELEISGKVMETMKR 660
Query: 661 LEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDSTAASRLVTLKDVEDGA 720
LEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDSTAASRLVTLKDVEDGA
Sbjct: 661 LEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDSTAASRLVTLKDVEDGA 720
Query: 721 FLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKLDSLLKRVRSMTDVLT 780
FLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKLDSLLKRVRSMTDVLT
Sbjct: 721 FLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKLDSLLKRVRSMTDVLT 780
Query: 781 MLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSE 840
MLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSE
Sbjct: 781 MLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSE 840
Query: 841 VVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQS 900
VVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQS
Sbjct: 841 VVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQS 900
Query: 901 PQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQ 960
PQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQ
Sbjct: 901 PQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQ 960
Query: 961 ANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRS 1020
ANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRS
Sbjct: 961 ANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRS 1020
Query: 1021 YLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPV 1080
YLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPV
Sbjct: 1021 YLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPV 1080
Query: 1081 TTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPR 1140
TTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPR
Sbjct: 1081 TTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPR 1140
Query: 1141 QYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPS 1200
QYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPS
Sbjct: 1141 QYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPS 1200
Query: 1201 IASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFS 1260
IASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFS
Sbjct: 1201 IASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFS 1260
Query: 1261 SSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS 1309
SSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS
Sbjct: 1261 SSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS 1309
>gi|148612813 sickle tail isoform 2 [Homo sapiens]
Length = 1264
Score = 2425 bits (6284), Expect = 0.0
Identities = 1229/1264 (97%), Positives = 1229/1264 (97%), Gaps = 35/1264 (2%)
Query: 81 MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHL 140
MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHL
Sbjct: 1 MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHL 60
Query: 141 SETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRM 200
SETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRM
Sbjct: 61 SETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRM 120
Query: 201 PNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLK 260
PNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLK
Sbjct: 121 PNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLK 180
Query: 261 VYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVP 320
VYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVP
Sbjct: 181 VYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVP 240
Query: 321 HSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKPDEDMS 380
HSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKPDEDMS
Sbjct: 241 HSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKPDEDMS 300
Query: 381 GKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSM 440
GKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSM
Sbjct: 301 GKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSM 360
Query: 441 QAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ 500
QAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ
Sbjct: 361 QAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ 420
Query: 501 PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRET- 559
PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRET
Sbjct: 421 PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRETR 480
Query: 560 ----------------------------------SEKMMKTTANRNHTDSAGTPHVSGGK 585
SEKMMKTTANRNHTDSAGTPHVSGGK
Sbjct: 481 ERMQAMEKQIASLTGLVQSALFKGPITSYSKDASSEKMMKTTANRNHTDSAGTPHVSGGK 540
Query: 586 MLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKK 645
MLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKK
Sbjct: 541 MLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKK 600
Query: 646 AELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDST 705
AELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDST
Sbjct: 601 AELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDST 660
Query: 706 AASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKL 765
AASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKL
Sbjct: 661 AASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKL 720
Query: 766 DSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSG 825
DSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSG
Sbjct: 721 DSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSG 780
Query: 826 QPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP 885
QPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP
Sbjct: 781 QPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP 840
Query: 886 QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD 945
QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD
Sbjct: 841 QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD 900
Query: 946 HYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKL 1005
HYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKL
Sbjct: 901 HYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKL 960
Query: 1006 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP 1065
GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP
Sbjct: 961 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP 1020
Query: 1066 AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1125
AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG
Sbjct: 1021 AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS
Sbjct: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS
Sbjct: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
Query: 1246 PQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA 1305
PQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA
Sbjct: 1201 PQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA 1260
Query: 1306 KETS 1309
KETS
Sbjct: 1261 KETS 1264
>gi|50843820 sickle tail isoform 1 [Homo sapiens]
Length = 1943
Score = 2181 bits (5651), Expect = 0.0
Identities = 1109/1170 (94%), Positives = 1114/1170 (95%), Gaps = 38/1170 (3%)
Query: 1 MEENESQKCEPCLPYSADRRQMQEQGKGNLHVTSPEDAECRRTKERLSNGNSRGSVSKSS 60
MEENESQKCEPCLPYSADRRQMQEQGKGNLHVTSPEDAECRRTKERLSNGNSRGSVSKSS
Sbjct: 1 MEENESQKCEPCLPYSADRRQMQEQGKGNLHVTSPEDAECRRTKERLSNGNSRGSVSKSS 60
Query: 61 RNIPRRHTLGGPRSSKEILGMQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTR 120
RNIPRRHTLGGPRSSKEILGMQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTR
Sbjct: 61 RNIPRRHTLGGPRSSKEILGMQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTR 120
Query: 121 SPKLSHSPQPPSLGDPVEHLSETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTK 180
SPKLSHSPQPPSLGDPVEHLSETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTK
Sbjct: 121 SPKLSHSPQPPSLGDPVEHLSETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTK 180
Query: 181 ERSLGVLYLQYGDETKQLRMPNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDES 240
ERSLGVLYLQYGDETKQLRMPNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDES
Sbjct: 181 ERSLGVLYLQYGDETKQLRMPNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDES 240
Query: 241 RNVYYELNDVRNIQDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRP 300
RNVYYELNDVRNIQDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRP
Sbjct: 241 RNVYYELNDVRNIQDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRP 300
Query: 301 GSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPI 360
GSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPI
Sbjct: 301 GSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPI 360
Query: 361 SPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDH 420
SPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDH
Sbjct: 361 SPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDH 420
Query: 421 IIAYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSD 480
IIAYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSD
Sbjct: 421 IIAYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSD 480
Query: 481 LRMIDMHAHYNAHGPPHTMQPDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPL 540
LRMIDMHAHYNAHGPPHTMQPDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPL
Sbjct: 481 LRMIDMHAHYNAHGPPHTMQPDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPL 540
Query: 541 MEKQVFAYSTATIPKDRET-----------------------------------SEKMMK 565
MEKQVFAYSTATIPKDRET SEKMMK
Sbjct: 541 MEKQVFAYSTATIPKDRETRERMQAMEKQIASLTGLVQSALFKGPITSYSKDASSEKMMK 600
Query: 566 TTANRNHTDSAGTPHVSGGKMLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQL 625
TTANRNHTDSAGTPHVSGGKMLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQL
Sbjct: 601 TTANRNHTDSAGTPHVSGGKMLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQL 660
Query: 626 QQMRQLQLQNQELLRAMMKKAELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEK 685
QQMRQLQLQNQELLRAMMKKAELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEK
Sbjct: 661 QQMRQLQLQNQELLRAMMKKAELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEK 720
Query: 686 IVKKLCELEDFVEDLKKDSTAASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMR 745
IVKKLCELEDFVEDLKKDSTAASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMR
Sbjct: 721 IVKKLCELEDFVEDLKKDSTAASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMR 780
Query: 746 AILRIEVEAVRFLKEEPHKLDSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAM 805
AILRIEVEAVRFLKEEPHKLDSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAM
Sbjct: 781 AILRIEVEAVRFLKEEPHKLDSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAM 840
Query: 806 EKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHS 865
EKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHS
Sbjct: 841 EKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHS 900
Query: 866 VALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKN 925
VALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKN
Sbjct: 901 VALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKN 960
Query: 926 RAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAP 985
RAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAP
Sbjct: 961 RAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAP 1020
Query: 986 VDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENIT 1045
VDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENIT
Sbjct: 1021 VDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENIT 1080
Query: 1046 AKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGS 1105
AKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQ
Sbjct: 1081 AKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQAF 1140
Query: 1106 SGAPQTSRMPVPMSAKNRPGTLDKPGKQSK 1135
+ S M V ++ P D K ++
Sbjct: 1141 Q---KCSFMDVNSNSHAEPSRADSHVKDTR 1167
Score = 414 bits (1065), Expect = e-115
Identities = 220/275 (80%), Positives = 226/275 (82%), Gaps = 19/275 (6%)
Query: 1035 VVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEE 1094
+V T N + ASS R P E P + PP S+S+
Sbjct: 1688 LVDTSCSSNRDSVASSSHIAQEASPRPLLVPDEGPTAL---EPPTSIPSASR-------- 1736
Query: 1095 GDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGG 1154
+GSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGG
Sbjct: 1737 --------KGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGG 1788
Query: 1155 DFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPA 1214
DFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPA
Sbjct: 1789 DFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPA 1848
Query: 1215 HSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQ 1274
HSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQ
Sbjct: 1849 HSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQ 1908
Query: 1275 GAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS 1309
GAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS
Sbjct: 1909 GAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS 1943
Score = 31.2 bits (69), Expect = 6.8
Identities = 68/325 (20%), Positives = 117/325 (36%), Gaps = 51/325 (15%)
Query: 788 DGLLKGTDAAQAAQYMAME-KATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSEVVPLSG 846
DG LK A+ + + + T ++ QE+ + S P T K+ L
Sbjct: 1611 DGTLKQHKEAKRFEIARSQPEDTPENTVRRQEQPSIESTSPISRTDEI--RKNTYRTLDS 1668
Query: 847 MMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATST--LQMSQAPQS---- 900
+ Q + + S ++ + + N VASS + QEA+ L + P +
Sbjct: 1669 LEQTIKQLENTISEMSPKALVDTSCSSNRDSVASSSHIAQEASPRPLLVPDEGPTALEPP 1728
Query: 901 ---PQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLE 957
P GS+ +SAKNR +++K K + K Q+ Y
Sbjct: 1729 TSIPSASRKGSSGAPQTSRMPVPMSAKNRPGTLDKPGK--QSKLQDPRQYR--------- 1777
Query: 958 EAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDS--PNSEQDLEKLGGK------- 1008
QAN + P + LP P + S P+S D L
Sbjct: 1778 --QANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSI 1835
Query: 1009 -----SPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATK 1063
SP PP S +P + + + +TG+ +++ SPQ++ +
Sbjct: 1836 ASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF---------SPQSQNGR 1886
Query: 1064 YPAEEPASAWTPSPPPVTTSSSKDE 1088
P P +++ SPP +S S ++
Sbjct: 1887 AP---PPLSFSSSPPSPASSVSLNQ 1908
Score = 30.8 bits (68), Expect = 8.9
Identities = 65/292 (22%), Positives = 108/292 (36%), Gaps = 51/292 (17%)
Query: 1046 AKASSEDAGPSPQTRATKYPAEE-PASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1104
A++S PS + A PA+ P A +P+ P TS+ + + + + G
Sbjct: 887 AQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQSP----QIPMNG 942
Query: 1105 SSGAPQTSRMPVPMSAKNRPGTLDKPGK--QSKLQDPRQYR-----------QANGSAKK 1151
S+ +SAKNR +++K K + K Q+ Y QAN
Sbjct: 943 SAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSI 1002
Query: 1152 SGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTG 1211
+ P + LP P + S P+S D L SP
Sbjct: 1003 PNLEMPPATGPLPRGDAPVDKVELSEDS--PNSEQDLEKLGGK------------SPPPP 1048
Query: 1212 PPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF---------SPQSQNGRAP---PPLSF 1259
PP S +P + + + +TG+ +++ SPQ++ + P P ++
Sbjct: 1049 PPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAW 1108
Query: 1260 SSSPPSPASSVSLN------QGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA 1305
+ SPP +S S + +G K + S+ N S+S A PS A
Sbjct: 1109 TPSPPPVTTSSSKDEEEEEEEGDKIMAELQAFQKCSFMDVN-SNSHAEPSRA 1159
>gi|115334682 SNAP25-interacting protein [Homo sapiens]
Length = 1183
Score = 617 bits (1591), Expect = e-176
Identities = 453/1261 (35%), Positives = 657/1261 (52%), Gaps = 188/1261 (14%)
Query: 23 QEQGKGNLHVTSPEDAECRRTKERLSNGNSRGSVSKSSRNI------PRRHTLGGPRSSK 76
Q+ + + + S +DAE R L G GS + N+ RRHT+ +S +
Sbjct: 7 QDPERSSPPMLSADDAEYPREYRTLGGGGGGGSGGRRFSNVGLVHTSERRHTVIAAQSLE 66
Query: 77 EILGMQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQ-------TRSPKLSHSPQ 129
+ G+Q ++ DRKR+AF++HLK KYP HA A+ G Q+R+R+Q TRS + + Q
Sbjct: 67 ALSGLQKADADRKRDAFMDHLKSKYPQHALALRGQQDRMREQPNYWSFKTRSSRHTQGAQ 126
Query: 130 PPSLGDPVEHLSETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYL 189
P L D LS SA+SLE MSE + P FSR +R R SLP+ RS +QTK RS GVL+L
Sbjct: 127 P-GLADQAAKLSYASAESLETMSEAELPLGFSRMNRFRQSLPLSRSASQTKLRSPGVLFL 185
Query: 190 QYGDETKQLRMPNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELND 249
Q+G+ET+++ + +E++S DT+ AL FPQ+LTM ML+SP+ AI IKDE+RNV+YEL D
Sbjct: 186 QFGEETRRVHITHEVSSLDTLHALIAHMFPQKLTMGMLKSPNTAILIKDEARNVFYELED 245
Query: 250 VRNIQDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHA 309
VR+IQDRS++K+Y K+P +A NGD+R RE+VYA + R + + PH
Sbjct: 246 VRDIQDRSIIKIYRKEPLYAAFPGSHLTNGDLR--REMVYASRESSPTRRLNNLSPAPHL 303
Query: 310 IPNSPPSTPVPHSMP-------PSPSRIPYGGTRSMVVPGNATI-PRDRISSLPVSRPIS 361
SPP +P +P PS SR+ Y G R G+ +R+ P ++ +S
Sbjct: 304 ASGSPPPG-LPSGLPSGLQSGSPSRSRLSYAGGRPPSYAGSPVHHAAERLGGAPAAQGVS 362
Query: 362 PSPSAILERRDVKPDEDMSGK--NIAMYRNEGFYADPY-LYHEGRMSIASSHGGHPLDVP 418
PSPSAILERRDVKPDED++ K + + + EG YADPY L HEGR+S+A++ G P P
Sbjct: 363 PSPSAILERRDVKPDEDLASKAGGMVLVKGEGLYADPYGLLHEGRLSLAAA-AGDPFAYP 421
Query: 419 DHIIAYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRV 478
Y R ++RS S Y ++Q+++ E SLY+ P + G + PP+SP ++
Sbjct: 422 GAGGLYKRGSVRSLSTYSAAALQSDL--EDSLYKAAGGGGP-LYGDGYGFRLPPSSPQKL 478
Query: 479 SDLRMIDMHAHYNAHGPPHTMQ---PDRASPSRQAFKKEPGTL-VYIEKP----RSAAGL 530
+D+ A PPH+ P R SP RQ+F+K+ G+ V+ E P RSA
Sbjct: 479 ADVA-----APPGGPPPPHSPYSGPPSRGSPVRQSFRKDSGSSSVFAESPGGKTRSAGSA 533
Query: 531 S----------------SLVDLGPPL-------------MEKQVFAYSTATIPKDRETSE 561
S SLV GPP+ MEKQ+ A T +
Sbjct: 534 STAGAPPSELFPGPGERSLVGFGPPVPAKDTETRERMEAMEKQI-ASLTGLVQSALLRGS 592
Query: 562 KMMKTTANRNHTDSAGTPHV---SGGKMLSALE---------STVPPSQPPPVGTSAIHM 609
+ + ++ A TP SGG+ A S+ P QP V + +
Sbjct: 593 EPETPSEKIEGSNGAATPSAPCGSGGRSSGATPVSGPPPPSASSTPAGQPTAVSRLQMQL 652
Query: 610 SLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKKAELEISGKVMETMKRLEDPVQRQR 669
L ++ S ++LR QLQQ+R+LQLQNQE +RA++K+ E E+S +V E +R EDP+QRQR
Sbjct: 653 HLRGLQNSASDLRGQLQQLRKLQLQNQESVRALLKRTEAELSMRVSEAARRQEDPLQRQR 712
Query: 670 VLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDSTAASRLVTLKDVEDGAFLLRQVGEA 729
LVE+ER +YL++EE I ++L +LE VE +++D + RLV ++E+ A +L+Q+GE
Sbjct: 713 TLVEEERLRYLNDEELITQQLNDLEKSVEKIQRDVSHNHRLVPGPELEEKALVLKQLGET 772
Query: 730 VATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKLDSLLKRVRSMTDVLTMLRRHVTDG 789
+ LK FP LQ+KMR +LR+EVEAV+FLKEEP +LD LLKR R VTD
Sbjct: 773 LTELKAHFPGLQSKMRVVLRVEVEAVKFLKEEPQRLDGLLKRCRG-----------VTDT 821
Query: 790 LLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSEVVPLSGMMV 849
L AQ + + L SQ T+ F+ + E+ P S
Sbjct: 822 L------AQIRRQVDEGVWPPPNNLLSQSPKKVTAETDFNKS-----VDFEMPPPS---- 866
Query: 850 RHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSA 909
P NL H S PA T P G+
Sbjct: 867 ---------------------PPLNL-HELSGPAEGASLT--------------PKGGNP 890
Query: 910 MQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPN 969
+ L SV ++AVS+E AE+ WEEKR L Y+ K+ +LLEE QA ++K+IP+
Sbjct: 891 TKGLDTPGKRSV---DKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIPD 947
Query: 970 LEMPPAT--GPLPRGD-----APVDKVELSEDSPNSEQDLEKL-------GGKSPPPPPP 1015
L+ GP P D AP + P+ + ++L S PPPP
Sbjct: 948 LDCASKAHPGPAPTPDHKPPKAPHGQKAAPRTEPSGRRGSDELTVPRYRTEKPSKSPPPP 1007
Query: 1016 PPRRSYLPGSGLTTTRSGDVVYTGRKEN-ITAKASSEDAG-PSPQTRATKYPAEEPASAW 1073
PPRRS+ GLTTTR+G+VV T +K++ KA SE+ PQ + + +E A
Sbjct: 1008 PPRRSFPSSHGLTTTRTGEVVVTSKKDSAFIKKAESEELEVQKPQVKLRRAVSEVARPA- 1066
Query: 1074 TPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVP-----MSAKNRPGTLD 1128
S PP+ S+ KDE++E D+I+AEL+ G+ ++ P +A+ + G+ D
Sbjct: 1067 --STPPIMASAIKDEDDE----DRIIAELESGGGSVPPMKVVTPGASRLKAAQGQAGSPD 1120
Query: 1129 KP--GKQ-SKLQDPRQYRQANGSAKKSGGDFKPTS-----PSLPASKIPALSPSSGKSSS 1180
K GKQ ++ + +QA +K+ G + +S PS + IP L+ ++SS
Sbjct: 1121 KSKHGKQRAEYMRIQAQQQATKPSKEMSGSNETSSPVSEKPSASRTSIPVLTSFGARNSS 1180
Query: 1181 L 1181
+
Sbjct: 1181 I 1181
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 73.2 bits (178), Expect = 2e-12
Identities = 108/537 (20%), Positives = 184/537 (34%), Gaps = 45/537 (8%)
Query: 804 AMEKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQ 863
A +KA++++ S EE G P P + + SS
Sbjct: 78 AKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASESSSSEESSDDDD 137
Query: 864 HSVALLNPAQN--LPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSV 921
P Q P ++ A P++A S+ S + + P N + + +
Sbjct: 138 EEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTK 197
Query: 922 SAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPR 981
+ A + K + + + E+A A K++P ++ A P+
Sbjct: 198 APPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQVV-AKAPVKA 256
Query: 982 GDAPVDKVELSEDSPNSEQDLEKLGGKS--------PPPPPPPPRRSYLPGSGLTTTRSG 1033
P K SEDS + E++ +K K+ PPP PPP++S L T
Sbjct: 257 ATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKS------LGTQPPK 310
Query: 1034 DVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPV-------TTSSSK 1086
V +++ + + S D S K P + S T PPP + SS
Sbjct: 311 KAV--EKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDS 368
Query: 1087 DEEEEEEEGDKIMAELQGSSGAPQ-TSRMPV--PMSAKNRPGTLDKPGKQSKLQDPRQYR 1143
D E++E K + SS P T++ P P +A +P + K
Sbjct: 369 DSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEE 428
Query: 1144 QANGS----AKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKP 1199
+++ S KK KP + + A +PA G S S SS +K
Sbjct: 429 ESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKS 488
Query: 1200 SI---------ASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQN 1250
++ + P P + + S S S+ S + + GKG S PQ+
Sbjct: 489 AVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKG---SPRPQAPK 545
Query: 1251 GRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKE 1307
L+ + + S + K + + QN ++ +A AK+
Sbjct: 546 ANGTSALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKKRKQNEAAKEAETPQAKK 602
Score = 54.3 bits (129), Expect = 8e-07
Identities = 72/336 (21%), Positives = 123/336 (36%), Gaps = 23/336 (6%)
Query: 975 ATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLP---GSGLTTTR 1031
A GP+ + K S DS +S ++ E++ G P +R LP + +
Sbjct: 70 ANGPVAK---KAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASES 126
Query: 1032 SGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEE 1091
S + + K G PQ +A K P ++ S+ + S SSS+DE +
Sbjct: 127 SSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSD-----SSSEDEPPK 181
Query: 1092 EEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKK 1151
++ ++ + AP P A + + S D + +A + KK
Sbjct: 182 NQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKK 241
Query: 1152 SGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTG 1211
+ K P A +P+ SSS SSS + P KP S+ P
Sbjct: 242 TVPK-KQVVAKAPVKA--ATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAP 298
Query: 1212 PPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPP---LSFSSSPPSP-- 1266
PP S P +++ Q + + S+ + PP +S +++ P P
Sbjct: 299 PPKKSLGTQP--PKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAK 356
Query: 1267 --ASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKA 1300
A S S + + + PS + +N S+ A
Sbjct: 357 KAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPA 392
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 67.0 bits (162), Expect = 1e-10
Identities = 106/469 (22%), Positives = 168/469 (35%), Gaps = 70/469 (14%)
Query: 824 SGQPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPA 883
SG P + P +++ P S +V S H+ A +N A + A +PA
Sbjct: 2314 SGTPPTAANYPSSSRTPQAPASANLVGPR---------SAHATAPVNIAGSRTAAALAPA 2364
Query: 884 VPQEATSTLQMSQAP-QSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQ 942
A +S A SP++P++ VS + +++A +
Sbjct: 2365 SLTSARMAPALSGANLTSPRVPLSA----------YERVSGRTSPPLLDRARSRTPPSAP 2414
Query: 943 NLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDL 1002
+ + + ++ M P+ + P PR P S S+Q
Sbjct: 2415 SQSRMTSER-----APSPSSRMGQAPSQSLLPPAQDQPRSPVP---------SAFSDQSR 2460
Query: 1003 EKLGGKSPPPPPPPPRRSYLPGSGLTTTRS-GD------VVYTGRKENITAKASSEDAGP 1055
+ +P +S G+ TTT S GD V G + + +
Sbjct: 2461 CLIAQTTPVAGS----QSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQ 2516
Query: 1056 SPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTS--- 1112
P A PA+E S+ + S ++SSS ++ +GSS Q
Sbjct: 2517 QPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVAL 2576
Query: 1113 -RMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPAL 1171
R+P P A P + G+ + ++ R+++ S+ S +S S +S
Sbjct: 2577 KRVPSPTPA---PKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSS----- 2628
Query: 1172 SPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQ 1231
S SS SSS SSS SS+ P+P P P SP+ PP S P SL+
Sbjct: 2629 SSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLR-- 2686
Query: 1232 SLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTR 1280
LS+SP + +P P SP SS S +G R
Sbjct: 2687 ------DSRSLSYSPVERRRPSPQP-----SPRDQQSSSSERGSRRGQR 2724
Score = 50.8 bits (120), Expect = 8e-06
Identities = 76/331 (22%), Positives = 119/331 (35%), Gaps = 53/331 (16%)
Query: 1013 PPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSED---AGPSPQTRATKY----- 1064
P P RR++ S + + S T R + +A A + AG SP + +
Sbjct: 253 PAPKSRRAHRSTSADSASSSD----TSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDA 308
Query: 1065 PAEEPASAWT--PSPPPVTTSS------SKDEEEEEEEGDKIMAELQGSSGAPQTSRMPV 1116
P EP + T PS P T KD++++E+ + + SS P+ P
Sbjct: 309 PFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPA-PT 367
Query: 1117 PMSAKNRPGT-------------LDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPS- 1162
P+ A+ G+ ++ P + S +D + + S + P SP
Sbjct: 368 PLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQP 427
Query: 1163 LPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPS 1222
S+ + SP S K + P S + S+ P A S P
Sbjct: 428 TKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSP 487
Query: 1223 VSNGSLKFQSLTHTGKGHHLSFSPQSQ---------NGRAPPPLSFSSSPPSPASSVSLN 1273
+ + +S T T +GH S SPQ + R+P S SP P S S N
Sbjct: 488 ATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRN 547
Query: 1274 QGAKGTRTIHTPSLTSYKAQNGSSSKATPST 1304
+G S A+ G S +P+T
Sbjct: 548 TQRRG---------RSRSARRGRSHSRSPAT 569
Score = 43.9 bits (102), Expect = 0.001
Identities = 64/269 (23%), Positives = 99/269 (36%), Gaps = 19/269 (7%)
Query: 1055 PSPQTRATKYPAEEPASAWTPSPPPVTTSSS--KDEEEEEEEGDKIMAELQGSSGAPQT- 1111
PS ++R+ P S TPS ++ SS KD G PQT
Sbjct: 1435 PSRRSRSGSSPGLRDGSG-TPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTP 1493
Query: 1112 ---SRMPVPMSAKNRPGT--LDKPGKQSKLQDPRQYRQANGSAKKSGG----DFKPTSPS 1162
SR P N+ T ++ G +S + R G +SG D KP++
Sbjct: 1494 RPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASP 1553
Query: 1163 LPASKIPALSPSSGKSSSLP----SSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSAS 1218
S+ + SP S + P S SG S + + P + + SP+ +A
Sbjct: 1554 QERSESDS-SPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAP 1612
Query: 1219 LIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKG 1278
S S+ S + ++ S S S GR P P SS+ SP +G
Sbjct: 1613 RAQSGSDSSPEPKAPAPRALPRR-SRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRG 1671
Query: 1279 TRTIHTPSLTSYKAQNGSSSKATPSTAKE 1307
+R+ P S SS+++P ++
Sbjct: 1672 SRSSPEPKTKSRTPPRRRSSRSSPELTRK 1700
Score = 43.5 bits (101), Expect = 0.001
Identities = 87/347 (25%), Positives = 131/347 (37%), Gaps = 57/347 (16%)
Query: 1008 KSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRAT----K 1063
K P P PP P S ++RS +K+ SE + P + + + K
Sbjct: 161 KQPAPEPPKPYSLVRESS---SSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKK 217
Query: 1064 YPAE-EPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQ--------GSSGAPQTSRM 1114
+ +E E SP P + SKD++ + + + S+ + TSR
Sbjct: 218 HRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRS 277
Query: 1115 PVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSG-GDFKPTSPSLP--ASKIPAL 1171
SA + T G+ P R+ G A S G PS P A+K P+
Sbjct: 278 R-SRSAAAKTHTTALAGRSPS---PASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPS- 332
Query: 1172 SP-------SSGKSSSLPSSSGD-SSNLPNPPATKP-----------SIASNPLSPQTGP 1212
SP KS++ PS S + SS P PPA P +A+ PLS +
Sbjct: 333 SPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVN 392
Query: 1213 PAHSAS------------LIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFS 1260
P AS +P S+ S T H S SP+S AP P S
Sbjct: 393 PPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPK-PAPAPGSHR 451
Query: 1261 SSPPSPASSVSLNQGAKGTRT-IHTPSLTSYKAQNGSSSKATPSTAK 1306
SP S + AK ++ HTPS ++++ +++K S ++
Sbjct: 452 EISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSR 498
Score = 41.2 bits (95), Expect = 0.007
Identities = 74/352 (21%), Positives = 121/352 (34%), Gaps = 40/352 (11%)
Query: 995 SPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGD-VVYTGRKENITAKASSEDA 1053
+P + L G +PP P S P + + G + NI ++
Sbjct: 2302 TPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAAL 2361
Query: 1054 GPSPQTRATKYPAEEPASAWTP--------------SPP----------PVTTSSSKDEE 1089
P+ T A PA A+ +P SPP P S S+
Sbjct: 2362 APASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTS 2421
Query: 1090 EEEEEGDKIMAELQGSSGAPQTS---RMPVPMSAKNRPGTL---DKPGKQSKLQDPRQYR 1143
E M + S P R PVP + ++ L P S+
Sbjct: 2422 ERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVA 2481
Query: 1144 QANGSAKKSGGDFKPTSPSLPASKI--PALSPSSGKSSSLPSSSGDSSNLPNPPATKPSI 1201
SA G +P +P S + P S + + S+L + + ++ S
Sbjct: 2482 TTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSS 2541
Query: 1202 ASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQS--QNGRAPPPLSF 1259
+S+ S + + S S SL Q + + +P+ + GR P P
Sbjct: 2542 SSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPA 2601
Query: 1260 -----SSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAK 1306
SSS S +SS S + + + + + S +S + + SSS ++PS AK
Sbjct: 2602 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAK 2653
Score = 38.9 bits (89), Expect = 0.033
Identities = 60/263 (22%), Positives = 90/263 (34%), Gaps = 20/263 (7%)
Query: 1015 PPPRRSYLPGSGLTTTRSGDVVYTGRKENIT-AKASSEDAGPSPQTRATKYPAEEPASAW 1073
P RRS +RS GR + T A+ S P + ++ PA +
Sbjct: 589 PARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSR 648
Query: 1074 TPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQT-----SRMPVPMSAKNRPGTLD 1128
+ +P S S+ + A G S + SR P ++R +L
Sbjct: 649 SRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLV 708
Query: 1129 KPGKQSKLQDPRQYRQANGSAKKSGG---DFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
+ G+ R+ R + S +K+ + S S P K +S +S S P S
Sbjct: 709 RRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSK 768
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTG--PPAHSASLIPSVSNGSLKFQSLTHTGKGHHLS 1243
S + S+P Q PP S S + K +S T + S
Sbjct: 769 AKS----RLSLRRSLSGSSPCPKQKSQTPPRRSRS-----GSSQPKAKSRTPPRRSRSSS 819
Query: 1244 FSPQSQNGRAPPPLSFSSSPPSP 1266
P Q + P S SSS P P
Sbjct: 820 SPPPKQKSKTPSRQSHSSSSPHP 842
Score = 36.6 bits (83), Expect = 0.16
Identities = 103/490 (21%), Positives = 168/490 (34%), Gaps = 68/490 (13%)
Query: 20 RQMQEQGKGNLHVTSPEDAECRRTKERLSNGNSRGSVSKSSRNIPRRHTLGGPRS-SKEI 78
R Q +G+ +S E RT +R S NS + KS + R +L PRS +K
Sbjct: 716 RTPQRRGRSG---SSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSR 772
Query: 79 LGMQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQT--RSPKLSHSPQPPSLGDP 136
L ++ S + K + P S Q + + +T R + S SP P
Sbjct: 773 LSLRRS---LSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKT 829
Query: 137 VEHLSETSADSLEAMSEGDAP---------------TPFSRGSRTRASLPVVRSTNQTKE 181
S +S+ + G P TP R + P ++S ++
Sbjct: 830 PSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRH 889
Query: 182 RSLGVLYLQYGDETKQLRMPNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESR 241
G + T + P+ +S +S P+Q + SPS + +
Sbjct: 890 SCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIIS--PRQRSHSGSSSPSPSRVTSRTTP 947
Query: 242 NVYYELNDVRNIQDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPG 301
++ N++ R L + +H+ + +P D +++ E P G
Sbjct: 948 RRSRSVSPCSNVESRLLPRY-----SHSGSSSP-----DTKVKPETP------PRQSHSG 991
Query: 302 STAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMV--VPGNATIPRDRISSLPVSRP 359
S + P +PP + S P P S+V PG+ ++ SS P
Sbjct: 992 SISPYPKVKAQTPPGPSLSGSKSPCPQE---KSKDSLVQSCPGSLSLCAGVKSSTPPGES 1048
Query: 360 ISPSPSAILE-RRDVKPDE--DMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLD 416
S L+ + PD D S + +E P L + + S GG
Sbjct: 1049 YFGVSSLQLKGQSQTSPDHRSDTSSPEVRQSHSES----PSLQSKSQ---TSPKGGRSRS 1101
Query: 417 VPDHIIAYHRTAIRS--ASAYCNPSMQAEMHMEQSLYRQKSRKYP---------DSHLPT 465
R+ IR +P +++ M EQS ++ S YP S L T
Sbjct: 1102 SSPVTELASRSPIRQDRGEFSASPMLKSGMSPEQSRFQSDSSSYPTVDSNSLLGQSRLET 1161
Query: 466 LGSKTPPASP 475
SK A P
Sbjct: 1162 AESKEKMALP 1171
Score = 36.6 bits (83), Expect = 0.16
Identities = 50/251 (19%), Positives = 85/251 (33%), Gaps = 35/251 (13%)
Query: 977 GPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPP-----PPPRRSYLPGSGLTT-- 1029
GP P G + E S + P + + G +S P P PP RRS LT
Sbjct: 1646 GPSPEGSS---STESSPEHPPKSRTARR-GSRSSPEPKTKSRTPPRRRSSRSSPELTRKA 1701
Query: 1030 --------------TRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTP 1075
TRS R ++++ +E + S + R+ P + S
Sbjct: 1702 RLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGR 1761
Query: 1076 SPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSK 1135
SP P + E + S + TSR +++R + G
Sbjct: 1762 SPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYH 1821
Query: 1136 LQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPP 1195
+ P + + S+++ G S+ P S +S + P+ S + +P
Sbjct: 1822 SRSPARQESSRTSSRRRRG----------RSRTPPTSRKRSRSRTSPAPWKRSRSRASPA 1871
Query: 1196 ATKPSIASNPL 1206
+ S + PL
Sbjct: 1872 THRRSRSRTPL 1882
Score = 36.2 bits (82), Expect = 0.21
Identities = 72/310 (23%), Positives = 110/310 (35%), Gaps = 38/310 (12%)
Query: 973 PPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRS 1032
PP P R +P KV+ + SP G S P P R+ T RS
Sbjct: 904 PPRQSP-SRSSSPQPKVK-AIISPRQRSH----SGSSSPSPSRVTSRT-------TPRRS 950
Query: 1033 GDVVYTGRKENITAKASSEDAGPSPQTRATKY--PAEEPASAWTP-------SPPPVTTS 1083
V E+ S SP T+ P + + + +P +PP + S
Sbjct: 951 RSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLS 1010
Query: 1084 SSKDEEEEEEEGDKIMAELQGSSG--APQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQ 1141
SK +E+ D ++ GS A S P P + +L G+ D R
Sbjct: 1011 GSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTP-PGESYFGVSSLQLKGQSQTSPDHRS 1069
Query: 1142 YRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLP-----NPPA 1196
++ ++S + SPSL + SP G+S S + +S P +
Sbjct: 1070 -DTSSPEVRQSHSE----SPSLQSKS--QTSPKGGRSRSSSPVTELASRSPIRQDRGEFS 1122
Query: 1197 TKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPP 1256
P + S +SP+ +S P+V + SL QS T + P ++ A PP
Sbjct: 1123 ASPMLKSG-MSPEQSRFQSDSSSYPTVDSNSLLGQSRLETAESKEKMALPPQEDATASPP 1181
Query: 1257 LSFSSSPPSP 1266
P P
Sbjct: 1182 RQKDKFSPFP 1191
Score = 33.9 bits (76), Expect = 1.1
Identities = 69/310 (22%), Positives = 109/310 (35%), Gaps = 31/310 (10%)
Query: 1006 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYT----GRKENITAKASSE-------DAG 1054
G +S PP RR GS +RS T G + A SS
Sbjct: 2064 GKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMS 2123
Query: 1055 PSPQTRATKYPAEEP-ASAWTP-------------SPPPVTTSSSKDEEEEEEEGDKIMA 1100
P+P R EP S+ TP P P + E +I
Sbjct: 2124 PTPLDRCRSPGMLEPLGSSRTPMSVLQQAGGSMMDGPGPRIPDHQRTSVPENHAQSRIAL 2183
Query: 1101 ELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTS 1160
L S T+R P MSA + + L R AN +++ +
Sbjct: 2184 ALTAISLG--TARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAAS--AAA 2239
Query: 1161 PSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLI 1220
+L +++ PA+ + + S ++ + NL +P A N P+T P A + +L
Sbjct: 2240 MNLASARTPAIPTAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRT-PTAPAVNLA 2298
Query: 1221 PSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLN-QGAKGT 1279
+ + +L SLT +G + P S P + P S ++ +N G++
Sbjct: 2299 GARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTA 2358
Query: 1280 RTIHTPSLTS 1289
+ SLTS
Sbjct: 2359 AALAPASLTS 2368
Score = 33.1 bits (74), Expect = 1.8
Identities = 72/324 (22%), Positives = 105/324 (32%), Gaps = 32/324 (9%)
Query: 293 DGPGAPRPGSTAHPPHAIPNSPPSTPVPHSMPPS----------PSRIPYGGTRSMVVPG 342
D P P G + P + P TP P S PS P R G S+
Sbjct: 1468 DIPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKT 1527
Query: 343 NATIPRDRISSLPVSRPISPSPSAILERR---DVKPDEDMSGKNIAMYRNEGFYADPYLY 399
A P + S S+ + PSA + R D PD + R+ + P +
Sbjct: 1528 VARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRS-GSSPEVD 1586
Query: 400 HEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYP 459
+ R+S S G +V D A R S S+ P A + + R +S
Sbjct: 1587 SKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSS-PEPKAPAPRALPR---RSRSGSSS 1642
Query: 460 DSHLPT-LGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQPDRASPSRQAFKKEP--- 515
P+ GS + +SP R A + P R P R++ + P
Sbjct: 1643 KGRGPSPEGSSSTESSPEHPPKSRT----ARRGSRSSPEPKTKSRTPPRRRSSRSSPELT 1698
Query: 516 GTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRET------SEKMMKTTAN 569
+ RSA+ PP + S K R + S KTT+
Sbjct: 1699 RKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSR 1758
Query: 570 RNHTDSAGTPHVSGGKMLSALEST 593
R + S + + S E T
Sbjct: 1759 RGRSPSPKPRGLQRSRSRSRREKT 1782
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 64.3 bits (155), Expect = 7e-10
Identities = 104/477 (21%), Positives = 162/477 (33%), Gaps = 61/477 (12%)
Query: 885 PQEATSTLQMS--QAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQ 942
P A+ T++ + ++P+ P ++S I E HSVS + S + R+
Sbjct: 81 PSGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEEHSVSENQESSSSSSSSSSSSTIRK 140
Query: 943 NLDHYNG---KEFEKLLE--EAQANIMKSIPNLEMP---PATGPLPRGDAPVDKVELSED 994
N +E +K L+ + + N K P + P A L GD V + S
Sbjct: 141 IKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTT 200
Query: 995 SPNSEQDLEKLGGKSP--PPPPPPPRRSYLPGSGLT-----------TTRSGDVVYTGRK 1041
N K+ P P P PP + LT TT + T K
Sbjct: 201 QHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGK 260
Query: 1042 ENITA--------KASSEDAGPSPQTRA---------TKYPA------------EEPASA 1072
E T+ K S++D P+ + A TK PA +EPAS
Sbjct: 261 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAST 320
Query: 1073 WTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN-RPGTLDKPG 1131
P P T S+ +E A AP T++ P P + K P T +P
Sbjct: 321 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA 380
Query: 1132 KQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNL 1191
+ P ++ + K PT+P PA P + P++ +
Sbjct: 381 PTTTKSAPTTPKEPAPTTPKKPA---PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 437
Query: 1192 PNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNG 1251
P PA P +P+ P P+ + K S T + +
Sbjct: 438 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT----KEPSPTTPKEPAPTTTKSAPTTT 493
Query: 1252 RAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-ATPSTAKE 1307
+ P P + S+P +P T P+ T+ K ++ K P+T KE
Sbjct: 494 KEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 550
Score = 55.8 bits (133), Expect = 3e-07
Identities = 80/369 (21%), Positives = 122/369 (33%), Gaps = 43/369 (11%)
Query: 957 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---- 1012
+E +KS P PA P AP E +P + ++ K P P
Sbjct: 323 KEPTPTTIKSAPTTPKEPA--PTTTKSAPTTP---KEPAPTTTKEPAPTTPKEPAPTTTK 377
Query: 1013 -PPPPPRRSY--LPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA--- 1066
P P +S P TT T ++ T P TK PA
Sbjct: 378 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 437
Query: 1067 -EEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1125
+EPA P P T +E A +P T + P P + K+ P
Sbjct: 438 PKEPAPTAPKKPAPTTPKEPAPTTPKEP------APTTTKEPSPTTPKEPAPTTTKSAPT 491
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
T +P + P ++ + + K PT+P PA P + P++
Sbjct: 492 TTKEPAPTTTKSAPTTPKEPSPTTTKEPA---PTTPKEPAPTTPKKPAPTTPKEPAPTTP 548
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
+ P P TK + P P P +A P + LT T +
Sbjct: 549 KE----PAPTTTKKPAPTTPKEPAPTTPKETAPTTP---------KKLTPTTPEKLAPTT 595
Query: 1246 PQSQNGRAPPPLSFSS----SPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-A 1300
P+ P L+ ++ +P +P A T P+ T+ K ++ K
Sbjct: 596 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 655
Query: 1301 TPSTAKETS 1309
P+T KET+
Sbjct: 656 APTTPKETA 664
Score = 53.5 bits (127), Expect = 1e-06
Identities = 80/364 (21%), Positives = 119/364 (32%), Gaps = 39/364 (10%)
Query: 957 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPP 1016
E A K P PA P+ AP +L+ +P EKL +P P P
Sbjct: 550 EPAPTTTKKPAPTTPKEPAP-TTPKETAPTTPKKLTPTTP------EKLAPTTPEKPAPT 602
Query: 1017 PRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA----EEPA-- 1070
P TT T KA++ + P K PA +EPA
Sbjct: 603 TPEELAP----TTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 658
Query: 1071 -----SAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1125
+ TP TT ++ K +A T P P + K
Sbjct: 659 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 718
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
T K + ++P G+A + + PT+P PA K L+P++ K + S++
Sbjct: 719 TTPKEPAPTTPKEPAP-TTPKGTAPTTLKEPAPTTPKKPAPK--ELAPTTTKGPT--STT 773
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
D P T P+ P PA + P + + + T H S
Sbjct: 774 SDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPD 833
Query: 1246 PQSQNGRA-PPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPST 1304
+ A P P + +SP P G T TP+ T + + K T
Sbjct: 834 ESTPELSAEPTPKALENSPKEP-----------GVPTTKTPAATKPEMTTTAKDKTTERD 882
Query: 1305 AKET 1308
+ T
Sbjct: 883 LRTT 886
Score = 45.1 bits (105), Expect = 5e-04
Identities = 69/306 (22%), Positives = 100/306 (32%), Gaps = 20/306 (6%)
Query: 871 PAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSI 930
PA P A++P P+E T AP +P+ P + +E + K A +
Sbjct: 623 PAPTTPK-AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP------KETAPTTPKGTAPTT 675
Query: 931 EKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPL-PRGDAPVDKV 989
K K+ KE + + P P T P P+ AP
Sbjct: 676 LKEPAPTTPKKPA-----PKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 730
Query: 990 ELSEDSPNSEQDLE-KLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAK- 1047
E + +P K + P P P + G T+T S T KE
Sbjct: 731 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 790
Query: 1048 ---ASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1104
A + P+P T T P S T + P T S DE E + L+
Sbjct: 791 KEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALEN 850
Query: 1105 SSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLP 1164
S P P + K T K ++ +D R + +A K + T+
Sbjct: 851 SPKEPGVPTTKTPAATKPEMTTTAK--DKTTERDLRTTPETTTAAPKMTKETATTTEKTT 908
Query: 1165 ASKIPA 1170
SKI A
Sbjct: 909 ESKITA 914
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 64.3 bits (155), Expect = 7e-10
Identities = 104/477 (21%), Positives = 162/477 (33%), Gaps = 61/477 (12%)
Query: 885 PQEATSTLQMS--QAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQ 942
P A+ T++ + ++P+ P ++S I E HSVS + S + R+
Sbjct: 122 PSGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEEHSVSENQESSSSSSSSSSSSTIRK 181
Query: 943 NLDHYNG---KEFEKLLE--EAQANIMKSIPNLEMP---PATGPLPRGDAPVDKVELSED 994
N +E +K L+ + + N K P + P A L GD V + S
Sbjct: 182 IKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTT 241
Query: 995 SPNSEQDLEKLGGKSP--PPPPPPPRRSYLPGSGLT-----------TTRSGDVVYTGRK 1041
N K+ P P P PP + LT TT + T K
Sbjct: 242 QHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGK 301
Query: 1042 ENITA--------KASSEDAGPSPQTRA---------TKYPA------------EEPASA 1072
E T+ K S++D P+ + A TK PA +EPAS
Sbjct: 302 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAST 361
Query: 1073 WTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN-RPGTLDKPG 1131
P P T S+ +E A AP T++ P P + K P T +P
Sbjct: 362 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA 421
Query: 1132 KQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNL 1191
+ P ++ + K PT+P PA P + P++ +
Sbjct: 422 PTTTKSAPTTPKEPAPTTPKKPA---PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Query: 1192 PNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNG 1251
P PA P +P+ P P+ + K S T + +
Sbjct: 479 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT----KEPSPTTPKEPAPTTTKSAPTTT 534
Query: 1252 RAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-ATPSTAKE 1307
+ P P + S+P +P T P+ T+ K ++ K P+T KE
Sbjct: 535 KEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 591
Score = 55.8 bits (133), Expect = 3e-07
Identities = 80/369 (21%), Positives = 122/369 (33%), Gaps = 43/369 (11%)
Query: 957 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---- 1012
+E +KS P PA P AP E +P + ++ K P P
Sbjct: 364 KEPTPTTIKSAPTTPKEPA--PTTTKSAPTTP---KEPAPTTTKEPAPTTPKEPAPTTTK 418
Query: 1013 -PPPPPRRSY--LPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA--- 1066
P P +S P TT T ++ T P TK PA
Sbjct: 419 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Query: 1067 -EEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1125
+EPA P P T +E A +P T + P P + K+ P
Sbjct: 479 PKEPAPTAPKKPAPTTPKEPAPTTPKEP------APTTTKEPSPTTPKEPAPTTTKSAPT 532
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
T +P + P ++ + + K PT+P PA P + P++
Sbjct: 533 TTKEPAPTTTKSAPTTPKEPSPTTTKEPA---PTTPKEPAPTTPKKPAPTTPKEPAPTTP 589
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
+ P P TK + P P P +A P + LT T +
Sbjct: 590 KE----PAPTTTKKPAPTTPKEPAPTTPKETAPTTP---------KKLTPTTPEKLAPTT 636
Query: 1246 PQSQNGRAPPPLSFSS----SPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-A 1300
P+ P L+ ++ +P +P A T P+ T+ K ++ K
Sbjct: 637 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 696
Query: 1301 TPSTAKETS 1309
P+T KET+
Sbjct: 697 APTTPKETA 705
Score = 53.5 bits (127), Expect = 1e-06
Identities = 80/364 (21%), Positives = 119/364 (32%), Gaps = 39/364 (10%)
Query: 957 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPP 1016
E A K P PA P+ AP +L+ +P EKL +P P P
Sbjct: 591 EPAPTTTKKPAPTTPKEPAP-TTPKETAPTTPKKLTPTTP------EKLAPTTPEKPAPT 643
Query: 1017 PRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA----EEPA-- 1070
P TT T KA++ + P K PA +EPA
Sbjct: 644 TPEELAP----TTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 699
Query: 1071 -----SAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1125
+ TP TT ++ K +A T P P + K
Sbjct: 700 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 759
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
T K + ++P G+A + + PT+P PA K L+P++ K + S++
Sbjct: 760 TTPKEPAPTTPKEPAP-TTPKGTAPTTLKEPAPTTPKKPAPK--ELAPTTTKGPT--STT 814
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
D P T P+ P PA + P + + + T H S
Sbjct: 815 SDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPD 874
Query: 1246 PQSQNGRA-PPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPST 1304
+ A P P + +SP P G T TP+ T + + K T
Sbjct: 875 ESTPELSAEPTPKALENSPKEP-----------GVPTTKTPAATKPEMTTTAKDKTTERD 923
Query: 1305 AKET 1308
+ T
Sbjct: 924 LRTT 927
Score = 45.1 bits (105), Expect = 5e-04
Identities = 69/306 (22%), Positives = 100/306 (32%), Gaps = 20/306 (6%)
Query: 871 PAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSI 930
PA P A++P P+E T AP +P+ P + +E + K A +
Sbjct: 664 PAPTTPK-AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP------KETAPTTPKGTAPTT 716
Query: 931 EKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPL-PRGDAPVDKV 989
K K+ KE + + P P T P P+ AP
Sbjct: 717 LKEPAPTTPKKPA-----PKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 771
Query: 990 ELSEDSPNSEQDLE-KLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAK- 1047
E + +P K + P P P + G T+T S T KE
Sbjct: 772 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 831
Query: 1048 ---ASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1104
A + P+P T T P S T + P T S DE E + L+
Sbjct: 832 KEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALEN 891
Query: 1105 SSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLP 1164
S P P + K T K ++ +D R + +A K + T+
Sbjct: 892 SPKEPGVPTTKTPAATKPEMTTTAK--DKTTERDLRTTPETTTAAPKMTKETATTTEKTT 949
Query: 1165 ASKIPA 1170
SKI A
Sbjct: 950 ESKITA 955
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 61.6 bits (148), Expect = 5e-09
Identities = 103/476 (21%), Positives = 163/476 (34%), Gaps = 65/476 (13%)
Query: 885 PQEATSTLQMSQAPQ----SPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEK 940
P+ T + S AP+ +P++P ++ ++E S S + + K E E K
Sbjct: 201 PRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSD---ILKVPKPEPIPEPK 257
Query: 941 RQNLDHYNGKEFEKLLEEAQANIM---KSIPNLEMPPATGPLPRGDAPVDKVE-LSEDSP 996
+ + + KE EK ++ +S P T P R + SP
Sbjct: 258 EPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSP 317
Query: 997 NSEQDLEKLGGKSPP---PPPPPPRRSYLP-----GSGLTTTRSGDVVYTGRKENITAKA 1048
+ ++PP PPPP RRS P S + + S + R + K
Sbjct: 318 RRRPSPRR---RTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKP 374
Query: 1049 SSEDAGPSPQTRATKYPAEEPASAWTPSPP----PVTTSSSKDEEEEEEEGDKI------ 1098
+ P +TR A P PSPP P T S ++ ++
Sbjct: 375 PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGR 434
Query: 1099 ----MAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQS---KLQDPRQYRQANGSAKK 1151
+ + +G+ S P P + DK GK + +Q RQYR+ N +
Sbjct: 435 TSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSS 494
Query: 1152 SGGDFKPTSPSLPA---------------SKIPALSPSSGKSSSLPSSSGDSSNLPNPPA 1196
G + P S + SPS K S G P+PP
Sbjct: 495 DSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPP 554
Query: 1197 TKPSIASNPLSP------QTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQN 1250
T+ + +P P T PP P + + + S P+ +
Sbjct: 555 TRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRT 614
Query: 1251 GRAPPPLSFSSSP-PSPASSVSLN----QGAKGTRTIHTPSLTSYKAQNGSSSKAT 1301
PPP +SP P P VS + Q + +PSL+S + S S++T
Sbjct: 615 ASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRST 670
Score = 48.1 bits (113), Expect = 5e-05
Identities = 66/295 (22%), Positives = 100/295 (33%), Gaps = 23/295 (7%)
Query: 938 EEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPN 997
E++R H E + + + P + R +P SP+
Sbjct: 503 EDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPS 562
Query: 998 SEQDLEKLGGKSPPP----PPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDA 1053
+ +PPP P PPPRR + R + + K +
Sbjct: 563 PAPPPRRRRTPTPPPRRRTPSPPPRRR-----SPSPRRYSPPIQRRYSPSPPPKRRTASP 617
Query: 1054 GPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSR 1113
P P+ RA+ P+ P + SPPP SS + K +GSS + T
Sbjct: 618 PPPPKRRAS--PSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSK---HRKGSSPSRSTRE 672
Query: 1114 MPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIP---- 1169
P K + Q+ P R A+ S ++ T P S+ P
Sbjct: 673 ARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKK 732
Query: 1170 ---ALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIP 1221
A SPS +S SSS S P P A KP +P+ Q+ P + + +P
Sbjct: 733 IKKAASPSP-QSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQS-PSTNWSPAVP 785
Score = 45.4 bits (106), Expect = 3e-04
Identities = 74/347 (21%), Positives = 119/347 (34%), Gaps = 39/347 (11%)
Query: 984 APVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTG---- 1039
A D V+ Q G S P+RS++ + R +
Sbjct: 474 AAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSP 533
Query: 1040 -RKENITAKASSEDAGPSP---QTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEG 1095
+++ T+ PSP + R + PA P TP+PPP + S
Sbjct: 534 RKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSP 593
Query: 1096 DKIMAELQG--SSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSG 1153
+ +Q S P R P R + P K+ P ++++ K+
Sbjct: 594 RRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRR- 652
Query: 1154 GDFKPTSPSLPASKIPALSPS-SGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSP-QTG 1211
SPSL + SPS S + + P + S P P A + S + P+ +
Sbjct: 653 ------SPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS 706
Query: 1212 PPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQN-----------GRAPPPLSFS 1260
P S PS S ++ S T K + SP Q+ G P
Sbjct: 707 SPQRRQS--PSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP 764
Query: 1261 SSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKE 1307
+PPSP S S T +P++ KA++ + S + P + +
Sbjct: 765 PAPPSPVQSQS-------PSTNWSPAVPVKKAKSPTPSPSPPRNSDQ 804
Score = 42.0 bits (97), Expect = 0.004
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 19/160 (11%)
Query: 965 KSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPG 1024
+S+ P A P AP V+ S N + KSP P P PPR S G
Sbjct: 751 RSVSGSPEPAAKKP----PAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEG 806
Query: 1025 SGLTTTRSGDVVY----------TGRKENITAKASSEDAGPSPQTRATKYPA-EEPASAW 1073
G + D + +KE A A++ P+ AT A EEP +A
Sbjct: 807 GGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPAAIAAATTTLAQEEPVAA- 865
Query: 1074 TPSPPPVTTSSSKD--EEEEEEEGDKIMAELQGSSGAPQT 1111
P P T S ++D ++ E+ +K + ++ + +PQ+
Sbjct: 866 -PEPKKETESEAEDNLDDLEKHLREKALRSMRKAQVSPQS 904
Score = 40.8 bits (94), Expect = 0.009
Identities = 87/414 (21%), Positives = 143/414 (34%), Gaps = 42/414 (10%)
Query: 906 NGSAMQSLFIEEIHSVSAKNRAVSIEK--AEKKWEEKRQNLDHYNGKEFEKLLEEAQANI 963
N + + S F+E + K R + EK + KK +E + D + + E +++
Sbjct: 115 NIAGIPSAFLE-LKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPR 173
Query: 964 MKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPP-------PP 1016
+ + P PR + + E S + K SP P P
Sbjct: 174 RRK--------SRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPE 225
Query: 1017 PRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPAS--AWT 1074
P S T + D++ + E I E PSP+ + K +E + +
Sbjct: 226 PSVKVKEPSVQEATSTSDILKVPKPEPIP-----EPKEPSPEKNSKKEKEKEKTRPRSRS 280
Query: 1075 PSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQS 1134
S T S + + P R P P + P + P +
Sbjct: 281 RSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRR-RTPPRRMPPPPRHR 339
Query: 1135 KLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNP 1194
+ + P + R+ SA SG +S S S+ P P ++SS P + S P
Sbjct: 340 RSRSPVR-RRRRSSASLSGSS---SSSSSSRSRSPPKKPPK-RTSSPPRKTRRLS----P 390
Query: 1195 PATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAP 1254
A+ P P P T PP S P SN + K + G+ + R
Sbjct: 391 SASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRES 450
Query: 1255 PPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSL---TSYKAQNGSSSKATPSTA 1305
P S +P +S ++ KG + S+ Y+ QN SS + S++
Sbjct: 451 P----SPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSS 500
Score = 39.3 bits (90), Expect = 0.025
Identities = 92/409 (22%), Positives = 134/409 (32%), Gaps = 93/409 (22%)
Query: 2 EENESQKCEPCLPYSADRRQMQEQGKGNLHVTSPEDAECRRTKERLSNGNS-RGSVSKSS 60
+E E +K P R + + + + SP RR S S R S
Sbjct: 267 KEKEKEKTRP-------RSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRR 319
Query: 61 RNIPRRHT----LGGP--------------RSSKEILGMQTSEMDRKREAFLEHLKQKYP 102
R PRR T + P RSS + G +S + + +K P
Sbjct: 320 RPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRS----PPKKPP 375
Query: 103 HHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHLSETSADSLEAMSEGDAPTPFSR 162
S+ RL P+ H P PP+ P S PTP +
Sbjct: 376 KRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHS---------------PTP-QQ 419
Query: 163 GSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRMPNEITSADTIRALFVSAFPQQL 222
+RTR S + + R+ G + G E ++ P A R + +S +
Sbjct: 420 SNRTRKS-----RVSVSPGRTSGKVTKHKGTEKRESPSP-----APKPRKVELSESEEDK 469
Query: 223 TMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLKVYNKDP--AHAFN--------H 272
KM + SV + R Y N + S ++ P +H N H
Sbjct: 470 GGKMAAADSV------QQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRH 523
Query: 273 TP-KTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPP-----STPVPHSMPPS 326
+P ++ + R +++ RG +P P T P PP TP P PS
Sbjct: 524 SPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPS 583
Query: 327 PSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKP 375
P P P R S P+ R SPSP +RR P
Sbjct: 584 P-------------PPRRRSPSPRRYSPPIQRRYSPSPPP--KRRTASP 617
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 58.9 bits (141), Expect = 3e-08
Identities = 54/212 (25%), Positives = 70/212 (33%), Gaps = 14/212 (6%)
Query: 1006 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP 1065
GG P PPPPP + P G G+ E + ++ GP P + P
Sbjct: 43 GGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERP 102
Query: 1066 AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1125
+ + +PPP K E + G+ + P P P G
Sbjct: 103 PPQGGNQSQGTPPP----PGKPERPPPQGGN----QSHRPPPPPGKPERPPPQGGNQSQG 154
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
PGK P Q + SA+ G KP P P P GK P +
Sbjct: 155 PPPHPGKPEG--PPPQEGNKSRSARSPPG--KPQGPPQQEGNKPQGPPPPGKPQGPPPAG 210
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSA 1217
G+ PPA KP P PQ G P A
Sbjct: 211 GNPQQPQAPPAGKPQ--GPPPPPQGGRPPRPA 240
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 57.4 bits (137), Expect = 9e-08
Identities = 80/327 (24%), Positives = 118/327 (36%), Gaps = 24/327 (7%)
Query: 898 PQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQN-LDHYNGKEFEKLL 956
P P IP++ + S A + K K +E R+ K K L
Sbjct: 159 PMLPTIPLSAFSDPKKTKPSHGSKDANKESSKTSKPHKVTKEHRERPRKDSESKSSSKEL 218
Query: 957 EEAQANIMKSIPNLEMPPATGPLPRGD-APVDKVELSEDSPN-SEQDLEKLGGKS--PPP 1012
E QA KS + G LP+ + AP K E E LE K PPP
Sbjct: 219 EREQA---KSSKDTSRKLGEGRLPKEEKAPPPKAAFKEPKMALKETKLESTSPKGGPPPP 275
Query: 1013 PPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRAT-----KYPAE 1067
PPPPPR S S T +++ ++K S G SP+T ++ K PA+
Sbjct: 276 PPPPPRAS----SKRPATADSPKPSAKKQKKSSSKGSRSAPGTSPRTSSSSSFSDKKPAK 331
Query: 1068 EPAS-----AWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN 1122
+ +S S P + + EE E+ +E SS + +S +
Sbjct: 332 DKSSTRGEKVKAESEPREAKKALEVEESNSEDEASFKSESAQSSPSNSSSSSDSSSDSDF 391
Query: 1123 RPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKS--SS 1180
P G + + Q +++ SG + + S++ S S SS
Sbjct: 392 EPSQNHSQGPLRSMVEDLQSEESDEDDSSSGEEAAGKTNPGRDSRLSFSDSESDNSADSS 451
Query: 1181 LPSSSGDSSNLPNPPATKPSIASNPLS 1207
LPS P PP +K S +P S
Sbjct: 452 LPSREPPPPQKPPPPNSKVSGRRSPES 478
Score = 43.5 bits (101), Expect = 0.001
Identities = 56/254 (22%), Positives = 90/254 (35%), Gaps = 21/254 (8%)
Query: 1055 PSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRM 1114
P + TK + P P PPP +SSK + + + SS
Sbjct: 254 PKMALKETKLESTSPKGGPPPPPPPPPRASSKRPATADSPKPSAKKQKKSSS-------- 305
Query: 1115 PVPMSAKNRPGTLDKPGKQSKLQDPRQYRQAN---GSAKKSGGDFKPTSPSLPASKIPAL 1171
+++ PGT + S D + + + G K+ + + +L + +
Sbjct: 306 ---KGSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSE 362
Query: 1172 SPSSGKSSSL---PSSSGDSSNLPNPPATKPSI--ASNPLSPQTGPPAHSASLIPSVSNG 1226
+S KS S PS+S SS+ + +PS + PL S S+G
Sbjct: 363 DEASFKSESAQSSPSNSSSSSDSSSDSDFEPSQNHSQGPLRSMVEDLQSEESDEDDSSSG 422
Query: 1227 SLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPS 1286
+ T+ G+ LSFS + A L S PP P N G R+ + S
Sbjct: 423 E-EAAGKTNPGRDSRLSFSDSESDNSADSSLP-SREPPPPQKPPPPNSKVSGRRSPESCS 480
Query: 1287 LTSYKAQNGSSSKA 1300
+ G+ KA
Sbjct: 481 KPEKILKKGTYDKA 494
Score = 30.8 bits (68), Expect = 8.9
Identities = 33/149 (22%), Positives = 49/149 (32%), Gaps = 4/149 (2%)
Query: 418 PDHIIAYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHR 477
P + HR R S + S + E +S + SRK + LP PP + +
Sbjct: 194 PHKVTKEHRERPRKDSESKSSSKELEREQAKSS-KDTSRKLGEGRLPKEEKAPPPKAAFK 252
Query: 478 VSDLRMIDMHAHYNAHG---PPHTMQPDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLV 534
+ + + + PP P RAS R A P +K S+ G S
Sbjct: 253 EPKMALKETKLESTSPKGGPPPPPPPPPRASSKRPATADSPKPSAKKQKKSSSKGSRSAP 312
Query: 535 DLGPPLMEKQVFAYSTATIPKDRETSEKM 563
P F+ K EK+
Sbjct: 313 GTSPRTSSSSSFSDKKPAKDKSSTRGEKV 341
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 57.4 bits (137), Expect = 9e-08
Identities = 70/303 (23%), Positives = 109/303 (35%), Gaps = 23/303 (7%)
Query: 973 PPATGPLPRGDA-PVDKVELSEDSPNSEQDLEKLGG----KSPPPPPPPPRRSYLPGSGL 1027
P + PLP P + E + P + +KLG +SP P P P PGS +
Sbjct: 105 PVKSPPLPEHQKIPCNSAE-PKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVV 163
Query: 1028 TTTRSGDVVYT--GRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSS 1085
+ + + ++++ + + P+ EP SP V + S
Sbjct: 164 SPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLS 223
Query: 1086 KDEEEEEEEGDKIMAELQGSSG-APQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQ 1144
+ +++ + + SS +P + P P P + K ++ P +
Sbjct: 224 NPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPS--PAASPESRKSARTTSPEPRKP 281
Query: 1145 ANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASN 1204
+ + + F SP P PA+SP S K P G P P + PS +S
Sbjct: 282 SPSESPEPWKPFPAVSPE-PRRPAPAVSPGSWK----PGPPGS----PRPWKSNPSASSG 332
Query: 1205 PLSPQTGPPAHSASL---IPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSS 1261
P P P+ S IPSVS G K + S SP S P S+ S
Sbjct: 333 PWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKS 392
Query: 1262 SPP 1264
PP
Sbjct: 393 GPP 395
Score = 49.7 bits (117), Expect = 2e-05
Identities = 84/332 (25%), Positives = 116/332 (34%), Gaps = 62/332 (18%)
Query: 994 DSPNSEQDLEKLGGKSPPPPPPPP------RRSYLPGSGLTTTRSGDVVYTGRKENITAK 1047
D P ++ + E KSPP P +P + T + G V+
Sbjct: 93 DKPKNQLNKETDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVL----------- 141
Query: 1048 ASSEDAGPSPQTRATKYPAEEPASAWTPS--PPPVTTSSSKDEEEEEEEGDKIMAELQGS 1105
S E P+P T ++P S +P P + SK E K + +
Sbjct: 142 -SPESPKPTP---LTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQ 197
Query: 1106 SGAPQTS---RMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPS 1162
AP S + P P+S ++ TL P Q + P + S+ P SP
Sbjct: 198 KLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASS--------PESPV 249
Query: 1163 LPAS-----KIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSA 1217
L AS PA SP S KS+ S P P PS + P P
Sbjct: 250 LAASPEPWGPSPAASPESRKSARTTS--------PEPRKPSPSESPEPWKPFPAVSPEPR 301
Query: 1218 SLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNG---RAPPPLSFSSSPPSPASSVSLNQ 1274
P+VS GS K G +P + +G A P S S P P SVS
Sbjct: 302 RPAPAVSPGSWK---PGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGP 358
Query: 1275 GAKGTRTIHTPSLTSYKAQNGSSSKATPSTAK 1306
TPS++S + SS +PS+ K
Sbjct: 359 WKP------TPSVSS---ASWKSSSVSPSSWK 381
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 57.4 bits (137), Expect = 9e-08
Identities = 94/358 (26%), Positives = 121/358 (33%), Gaps = 54/358 (15%)
Query: 973 PPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---PPPPPRRSYLPGSGLTT 1029
P AT P P+G + + +P + K G +PPP P P P GL T
Sbjct: 1129 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT 1188
Query: 1030 TRSGDVVYTGRKENITAKASSEDAGP--SPQTRATKYPAEEPASAWTPSPPPVTTSSSKD 1087
T + K P +P T A P+ + A TPSP T+ +
Sbjct: 1189 PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLA-TPSPKGAPTTPA-- 1245
Query: 1088 EEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANG 1147
A G P T P P A P P + L P N
Sbjct: 1246 ------------ATPPSPKGGPAT---PPPKGAPTPPAA-TPPSLKGGLATPPHKGAPNP 1289
Query: 1148 SA----KKSGGDFKPTSPSLPASKIPALSPSSGKSS-SLPSSSGDSSNLPNPPA-TKPSI 1201
+ GG TSP A PA +P S K S P G P PPA T PS
Sbjct: 1290 AVVTPPSPKGG--PATSPPKGAPTPPAATPPSPKGSPGTPPPKG----APTPPAVTPPSP 1343
Query: 1202 ASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPP------ 1255
P P T P + PS G + T + KG P + G A P
Sbjct: 1344 KGTPTLPATTPSSKGGPTTPSSKEGPTP-PAATPSHKGGPAMTPPSPKRGPAIPSPKGDP 1402
Query: 1256 ------PLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSY---KAQNGSSSKATPST 1304
PLS +P +P + +KG T P++T KA S+ K P+T
Sbjct: 1403 TSPAVIPLSPKKAPATPVTREGAATPSKGDLT--PPAVTPVSLKKAPATSAPKGGPAT 1458
Score = 56.2 bits (134), Expect = 2e-07
Identities = 120/496 (24%), Positives = 183/496 (36%), Gaps = 81/496 (16%)
Query: 872 AQNLPHVASSPAVPQEATSTL----QMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRA 927
++N P VA SP +TL ++ ++ SP +P G+ + ++ I SA
Sbjct: 705 SENCP-VAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPV 763
Query: 928 VSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPP----ATGP-LPRG 982
S K E E+ + + L + + P + PP + GP P G
Sbjct: 764 ASSPK-ECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIG 822
Query: 983 D--APVDKVELSEDSPNSEQDLEKLGGKSPP-----PPPPPPRRSYLPGSGLTTTRSGDV 1035
+ +PV VE S NS L G K P P PP P+ + P + T S
Sbjct: 823 NLSSPVSPVEASFLPENS---LSFQGSKDSPATTHSPTPPSPKGAPTPSA--VTPLSPKG 877
Query: 1036 VYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEG 1095
V KE P+P +P E PA+ P ++ +SS ++
Sbjct: 878 VTLPPKET-----------PTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPA 926
Query: 1096 DKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLD-KPGKQSKLQDPRQYRQANGSAKKSGG 1154
K + GAP T P S K P T K P + + G
Sbjct: 927 PKGIPASPSPKGAP-TPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGA 985
Query: 1155 DFKPTS--------PSLPASK----IPALSPSSGKSSSLPSSSGDSSNLP---NPPATKP 1199
P + P+ P+ K PA++P S K S + ++ P PP+ K
Sbjct: 986 PTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKG 1045
Query: 1200 SIASNPL-------------SPQTGPPAHS---ASLIPSVSNGSLKFQSLTHTGKGHHL- 1242
S A+ PL SP+ GP S A P+ + S K T + KG +
Sbjct: 1046 SPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMP 1105
Query: 1243 --SFSPQSQNGRAPP-----PLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNG 1295
+ P + G A P P + +++PPSP ++ KG T TP+ T + G
Sbjct: 1106 PAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLA-TPPPKGAPT--TPAATPPSPKGG 1162
Query: 1296 SSS---KATPSTAKET 1308
++ K P+T T
Sbjct: 1163 LATPPPKGAPTTPAAT 1178
Score = 53.9 bits (128), Expect = 1e-06
Identities = 93/385 (24%), Positives = 130/385 (33%), Gaps = 65/385 (16%)
Query: 973 PPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---PPPPPRRSYLPGSGLTT 1029
P AT P P+G + + +P + K G +PPP P PP GL T
Sbjct: 1221 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLAT 1280
Query: 1030 TRSGDVVYTGRKENITAKASSEDAGP--SPQTRATKYPAEEPASA----------WTPSP 1077
+ G S GP SP A PA P S P+P
Sbjct: 1281 PP-----HKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTP 1335
Query: 1078 P-------------PVTTSSSKD--EEEEEEEGDKIMAELQGSSGAPQTS--------RM 1114
P P TT SSK +EG A G P + +
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAI 1395
Query: 1115 PVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTS---------PSLPA 1165
P P P + K++ P G+A S GD P + P+ A
Sbjct: 1396 PSPKGDPTSPAVIPLSPKKA----PATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSA 1451
Query: 1166 SKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKP-SIASNPLSPQTGPPAHSASLIPSVS 1224
K +PSS +LP+ + S PPA K + +S+P P A +P+V
Sbjct: 1452 PKGGPATPSSKGDPTLPAVTPPSPK--EPPAPKQVATSSSPKKAPATPAPMGAPTLPAVI 1509
Query: 1225 NGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHT 1284
S K T + + ++ + + + P L+ + PA +V K T I T
Sbjct: 1510 PSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTV---PSPKKTPAIPT 1566
Query: 1285 PS---LTSYKAQNGSSSKATPSTAK 1306
P T + S TPST K
Sbjct: 1567 PKEAPATPSSKEASSPPAVTPSTYK 1591
Score = 50.4 bits (119), Expect = 1e-05
Identities = 88/362 (24%), Positives = 127/362 (35%), Gaps = 48/362 (13%)
Query: 973 PPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---PPPPPRRSYLPGSGLTT 1029
P AT P P+G + + +P + K G +P P P P P GL T
Sbjct: 1152 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT 1211
Query: 1030 TRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEE 1089
T + K A PSP+ T A P+ P+ PP + +
Sbjct: 1212 PSPKGAPTTPAATPPSPKGGL--ATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAA 1269
Query: 1090 EEEEEGDKIMAELQGSSGAPQTSRMP-----VPMSAKNRPGTLDKPGKQSK-LQDPRQYR 1143
L+G P P P S K P T G + P +
Sbjct: 1270 TPPS--------LKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPK 1321
Query: 1144 QANGSAKKSGGDFKPTSPSL--PASK----IPALSPSSGKSSSLPSSSGDSSNLPNPPAT 1197
+ G+ G PT P++ P+ K +PA +PSS + PSS P PPA
Sbjct: 1322 GSPGTPPPKGA---PTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEG----PTPPAA 1374
Query: 1198 KPSI----ASNPLSPQTGPPAHSASLIPS----VSNGSLKFQSLTHTGKGHHLSFSPQSQ 1249
PS A P SP+ GP S P+ + K + T +G + S+
Sbjct: 1375 TPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREG----AATPSK 1430
Query: 1250 NGRAPPPLSFSSSPPSPASSV----SLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA 1305
PP ++ S +PA+S +KG T+ + S K AT S+
Sbjct: 1431 GDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSP 1490
Query: 1306 KE 1307
K+
Sbjct: 1491 KK 1492
Score = 49.7 bits (117), Expect = 2e-05
Identities = 119/547 (21%), Positives = 189/547 (34%), Gaps = 93/547 (17%)
Query: 792 KGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSEVVP---LSGMM 848
KG A ++++KA A K + G P P K P +
Sbjct: 1430 KGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSS 1489
Query: 849 VRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQS--PQIPMN 906
+ A ++P + + + + +P SS P T+TL + P + P+ +
Sbjct: 1490 PKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALI 1549
Query: 907 GSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLL---------- 956
AM ++ ++ A + +++ Y G K L
Sbjct: 1550 PPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPS 1609
Query: 957 -EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELS--EDSPNSEQDLE-KLGGKSPPP 1012
+EA + P+ E PAT P P+G V S +DSP S + K+G P
Sbjct: 1610 PKEAPTPPAVTPPSPEKGPAT-PAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQA 1668
Query: 1013 PPPPPRRSYLPGSGLTTTR---------SGDVVYTGRKENITAKASSEDAGPSPQTRATK 1063
P + G T + S ++ ++ K SS + P + K
Sbjct: 1669 SKGLPAKK-----GPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAK 1723
Query: 1064 YPAEEPASAWTPSPP-PVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN 1122
++ P S P+P PV SSK + ++ + AP S+ P++A
Sbjct: 1724 NGSKGPLSTVAPAPLLPVQKDSSKTAKGKDA------SHSPKGPLAPPESKASTPLTAAA 1777
Query: 1123 RPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLP 1182
L KP SA S P S L S +P L P K LP
Sbjct: 1778 FEKVLPKPE----------------SASVSAAPSPPVSLPLAPSPVPTLPP---KQQFLP 1818
Query: 1183 SSSG---DSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKG 1239
SS G +S + P PA + + PL P P +G + FQS+
Sbjct: 1819 SSPGLVLESPSKPLAPADEDELL--PLIP------------PEPISGGVPFQSV------ 1858
Query: 1240 HHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK 1299
L P ++ P P PS V+ N GT + S+ + Q+ S++
Sbjct: 1859 --LVNMPTPKSAGIPVP------TPSAKQPVTKNNKGSGTESDSDESVPELEEQD--STQ 1908
Query: 1300 ATPSTAK 1306
AT A+
Sbjct: 1909 ATTQQAQ 1915
Score = 37.4 bits (85), Expect = 0.095
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 295 PGAPRPGSTAHPPHAIPNSP---PSTPVPHSMPPSPSRIPYG--GTRSMVVPGNATIPRD 349
P +P P PP A P SP P+TP P P P+ P G + P A P
Sbjct: 931 PASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPA 990
Query: 350 RISSLPVSRPISPSP 364
P P +PSP
Sbjct: 991 ATPPSPKGGPATPSP 1005
Score = 37.4 bits (85), Expect = 0.095
Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 294 GPGAPRPGSTAHPPHAIPNSP---PSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDR 350
GP P P PP A P SP P+TP P P P+ P S P P+
Sbjct: 976 GPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGS---PAATPFPKG- 1031
Query: 351 ISSLPVSRPISP--SPSA 366
S+ P + P SP SP+A
Sbjct: 1032 ASTPPAATPPSPKGSPAA 1049
Score = 37.0 bits (84), Expect = 0.12
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 291 RGDGPGAPRPGSTAHPPHAIP----NSPPSTPVPHSMPPSPSRI---PYGGTRSMVVPGN 343
+G P P + PP A P SP +TP+P P +P+ P GG + + G
Sbjct: 1020 KGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGA 1079
Query: 344 ATIPRDRISSLPVSRPISPSP 364
T P S P P +PSP
Sbjct: 1080 PTPPAATPPS-PKGGPATPSP 1099
Score = 34.7 bits (78), Expect = 0.62
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 10/78 (12%)
Query: 294 GPGAPRPGSTAHPPHAIPNSP---PSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDR 350
GP P P PP A P SP P+TP P P P+ P P P
Sbjct: 953 GPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAP--- 1009
Query: 351 ISSLPVSRPISP--SPSA 366
+ P P SP SP+A
Sbjct: 1010 --TPPAVTPPSPKGSPAA 1025
Score = 34.3 bits (77), Expect = 0.80
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 8/72 (11%)
Query: 294 GPGAPRPGSTAHPPHAIPNSP---PSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDR 350
GP P PP A P SP P+TP P P P+ P G AT P
Sbjct: 1070 GPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATP-----PSPKGGLATPPHKG 1124
Query: 351 ISSLPVSRPISP 362
+ P + P SP
Sbjct: 1125 APTTPAATPPSP 1136
Score = 34.3 bits (77), Expect = 0.80
Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 294 GPGAPRPGSTAHPPHAIPNSP---PSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDR 350
GP P PP A P SP P TP P P P+ P + +P AT P +
Sbjct: 1300 GPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLP--ATTPSSK 1357
Query: 351 ISSLPVSRPISPSPSA 366
S P+P A
Sbjct: 1358 GGPTTPSSKEGPTPPA 1373
Score = 32.3 bits (72), Expect = 3.1
Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 15/81 (18%)
Query: 294 GPGAPRPGSTAHPPHAIPNSPPSTPV-----------PHSMPPSPSRIPYGGTRSMVVPG 342
GP P P PP P SP +P P + PPSP P + + G
Sbjct: 999 GPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSP---AATPLPKG 1055
Query: 343 NATIPRDRISSLPVSRPISPS 363
T P + S P P +PS
Sbjct: 1056 APTTPAATLPS-PKGGPATPS 1075
Score = 32.3 bits (72), Expect = 3.1
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 296 GAPRPGSTAHPPHAIPNSPPSTPVPHSM-PPSPSRIPYGGTRSMVVPGNATIPRDRISSL 354
GAP P PP SP P P ++ PPSP + G + G T P SSL
Sbjct: 1592 GAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEK----GPATPAPKGTPTSPPVTPSSL 1647
Query: 355 PVSRPISPS 363
S P SP+
Sbjct: 1648 KDS-PTSPA 1655
Score = 32.0 bits (71), Expect = 4.0
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 8/72 (11%)
Query: 294 GPGAPRPGSTAHPPHAIPNSPP---STPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDR 350
GP P P PP A P SP +TP P +P+ P G AT P
Sbjct: 1093 GPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATP-----PSPKGGLATPPPKG 1147
Query: 351 ISSLPVSRPISP 362
+ P + P SP
Sbjct: 1148 APTTPAATPPSP 1159
Score = 32.0 bits (71), Expect = 4.0
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 13/80 (16%)
Query: 295 PGAPRPGSTAHPPHAIPNSPPSTP---------VPHSMPPSPSRIPYGGTRSMVVPGNAT 345
P +P+ G PP P P +TP PH P+P+ + T G AT
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVV----TPPSPKGGPAT 1303
Query: 346 IPRDRISSLPVSRPISPSPS 365
P + P + P SP S
Sbjct: 1304 SPPKGAPTPPAATPPSPKGS 1323
Score = 32.0 bits (71), Expect = 4.0
Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 297 APRPGSTAHPPHAIPNSP---PSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRD-RIS 352
+P P PP P SP P+TP P P SP P S P + T +
Sbjct: 1607 SPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVP 1666
Query: 353 SLPVSRPISPSPSAILE 369
P P+A+ E
Sbjct: 1667 QASKGLPAKKGPTALKE 1683
Score = 30.8 bits (68), Expect = 8.9
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 295 PGAPRPGSTAHPPHAIPNSPPSTPV-----PHSMPPSPSRIPYGGTRSMVVPGNATIPRD 349
P +P+ G P P +P +TP P + PP + P T + G AT P
Sbjct: 1225 PPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHK 1284
Query: 350 RISSLPVSRPISP 362
+ V P SP
Sbjct: 1285 GAPNPAVVTPPSP 1297
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 57.0 bits (136), Expect = 1e-07
Identities = 117/519 (22%), Positives = 170/519 (32%), Gaps = 94/519 (18%)
Query: 819 EAAHTSGQ--PFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLP 876
E +SG+ P ++ + D+K+E V S V+ SSP+ Q
Sbjct: 50 EDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQRE----------- 98
Query: 877 HVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKK 936
VAS +S +Q P P G S+ +R+V+ E
Sbjct: 99 KVASDTEEADRTSSKKTKTQEISRPNSPSEG-----------EGESSDSRSVNDE----- 142
Query: 937 WEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSP 996
G K +++ + SIP+ + + D+ + L P
Sbjct: 143 ------------GSSDPKDIDQDNRSTSPSIPSPQDNESD-----SDSSAQQQMLQAQPP 185
Query: 997 NSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPS 1056
L+ G +P P PP LP G T + + + P
Sbjct: 186 ----ALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPV 241
Query: 1057 PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQT-SRMP 1115
P T + PA P +P PPP + + L GS+G P S
Sbjct: 242 PHTHIQQAPALHPQRPPSPHPPPHPSPHPP------------LQPLTGSAGQPSAPSHAQ 289
Query: 1116 VPMSAKNRPG--------TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKP-TSPSLPAS 1166
P+ + PG L PG P Q Q S P TS LPAS
Sbjct: 290 PPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPAS 349
Query: 1167 KIPALSPSSGKSSSLPSSSGDSSNLPNPPATK----PSIASNPLSPQTGPP---AHSASL 1219
+ S + LP + ++ PP T P+ ++ P P + +A+L
Sbjct: 350 QSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANL 409
Query: 1220 IPSVSNGSLKFQSLTHTGKGH--HLSFSPQSQ----NGRAPPPLSFSSS-PPSPAS--SV 1270
P + L S H H L PQSQ + PP L+ S + PP PAS
Sbjct: 410 PPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPT 469
Query: 1271 SLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS 1309
L+Q A P + G TP T TS
Sbjct: 470 GLHQVAP------QPPFAQHPFVPGGPPPITPPTCPSTS 502
Score = 37.4 bits (85), Expect = 0.095
Identities = 84/386 (21%), Positives = 132/386 (34%), Gaps = 43/386 (11%)
Query: 136 PVEHLSETSADSLEAMSEG-DAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDE 194
P TS + + S G ++P+ S S + V +S + KE + L
Sbjct: 38 PASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPL------- 90
Query: 195 TKQLRMPNEITSADTIRALFVSAFPQQLT-MKMLESPSVAIYIKDESRNVYYELNDVRNI 253
K + E ++DT A S+ + + SPS +SR+V E +
Sbjct: 91 -KSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKD 149
Query: 254 QDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNS 313
D+ P+ N + + D Q++++ A+ P P P + P
Sbjct: 150 IDQDNRSTSPSIPSPQDNES----DSDSSAQQQMLQAQP--PALQAPTGVTPAPSSAPPG 203
Query: 314 PPSTPVPHSMPPSPSRIPYGGTRSMVVPG-----NATIPRDRISSLPVSRP-ISPSPSAI 367
P P P P + + P G + P A +P I P P PSP
Sbjct: 204 TPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPP 263
Query: 368 LERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGG---------HPLDVP 418
P + ++G A + +A P L+ +G S G P +P
Sbjct: 264 PHPSPHPPLQPLTGS--AGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLP 321
Query: 419 DHIIAYHRTAIRS-ASAYCNPSMQ--AEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASP 475
S A+AY + S+Q A QS + + P + L K PP +P
Sbjct: 322 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTP 381
Query: 476 HRVSDLRMIDMHAHYNAHGPPHTMQP 501
+ L H H PPH P
Sbjct: 382 --IPQLPAPQAHKH-----PPHLSGP 400
Score = 37.4 bits (85), Expect = 0.095
Identities = 41/202 (20%), Positives = 72/202 (35%), Gaps = 11/202 (5%)
Query: 1026 GLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSS 1085
G T+ + D+ +GR A SS D+ ++ K EE +S + +S
Sbjct: 43 GRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVAS 102
Query: 1086 KDEEEEEEEGDKIMAELQGSSGAPQ------TSRMPVPMSAKNRPGTLDKPGKQSKLQDP 1139
EE + K + +P + V + P +D+ + + P
Sbjct: 103 DTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIP 162
Query: 1140 RQY---RQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPA 1196
++ SA++ +P + P PA S + + LP+ S PP
Sbjct: 163 SPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQ 222
Query: 1197 TKPSIASNPLSPQ--TGPPAHS 1216
P+ + P PQ T P H+
Sbjct: 223 GSPTASQAPNQPQAPTAPVPHT 244
Score = 33.5 bits (75), Expect = 1.4
Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 30/269 (11%)
Query: 968 PNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGS-- 1025
P L++ P + PLP A + S++ P G P PP + ++PG
Sbjct: 432 PPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPP 491
Query: 1026 --------GLTTTRSGDVVYTGRKENITAKASSEDAG----PSPQTRATKYPAEEPASAW 1073
+T +G + A + AG P P + + ++
Sbjct: 492 PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPE 551
Query: 1074 TPSPPPVTTSSSK---DEEEEEEEGDKIMAEL-QGSSGAPQTSRMPVPMS----AKNRPG 1125
+P PPP + S D + + L +G + +T +P++ AK R
Sbjct: 552 SPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREE 611
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
++K ++++ Q R+ R+ +K + + + S G+ S P S
Sbjct: 612 AIEKAKREAE-QKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSD-PQLS 669
Query: 1186 GDSSNLPN--PPATKPSIASNPLSPQTGP 1212
G P+ PP T +IA+ P P GP
Sbjct: 670 GPGHMRPSFEPPPT--TIAAVP--PYIGP 694
Score = 32.0 bits (71), Expect = 4.0
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 295 PGAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSL 354
P P P + HPPH SP S + ++PP P+ P + P P + +
Sbjct: 383 PQLPAPQAHKHPPHLSGPSPFS--MNANLPPPPALKPLSSLSTHHPPSAHPPP---LQLM 437
Query: 355 PVSRPISPSPS 365
P S+P+ SP+
Sbjct: 438 PQSQPLPSSPA 448
Score = 31.6 bits (70), Expect = 5.2
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 17/83 (20%)
Query: 263 NKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGS---TAHPPHAIPNSPPSTPV 319
+K P H +P +MN ++ P A +P S T HPP A P PP +
Sbjct: 391 HKHPPHLSGPSPFSMNANL-----------PPPPALKPLSSLSTHHPPSAHP--PPLQLM 437
Query: 320 PHSMP-PSPSRIPYGGTRSMVVP 341
P S P PS P G T+S +P
Sbjct: 438 PQSQPLPSSPAQPPGLTQSQNLP 460
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 57.0 bits (136), Expect = 1e-07
Identities = 117/519 (22%), Positives = 170/519 (32%), Gaps = 94/519 (18%)
Query: 819 EAAHTSGQ--PFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLP 876
E +SG+ P ++ + D+K+E V S V+ SSP+ Q
Sbjct: 604 EDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQRE----------- 652
Query: 877 HVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKK 936
VAS +S +Q P P G S+ +R+V+ E
Sbjct: 653 KVASDTEEADRTSSKKTKTQEISRPNSPSEG-----------EGESSDSRSVNDE----- 696
Query: 937 WEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSP 996
G K +++ + SIP+ + + D+ + L P
Sbjct: 697 ------------GSSDPKDIDQDNRSTSPSIPSPQDNESD-----SDSSAQQQMLQAQPP 739
Query: 997 NSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPS 1056
L+ G +P P PP LP G T + + + P
Sbjct: 740 ----ALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPV 795
Query: 1057 PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQT-SRMP 1115
P T + PA P +P PPP + + L GS+G P S
Sbjct: 796 PHTHIQQAPALHPQRPPSPHPPPHPSPHPP------------LQPLTGSAGQPSAPSHAQ 843
Query: 1116 VPMSAKNRPG--------TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKP-TSPSLPAS 1166
P+ + PG L PG P Q Q S P TS LPAS
Sbjct: 844 PPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPAS 903
Query: 1167 KIPALSPSSGKSSSLPSSSGDSSNLPNPPATK----PSIASNPLSPQTGPP---AHSASL 1219
+ S + LP + ++ PP T P+ ++ P P + +A+L
Sbjct: 904 QSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANL 963
Query: 1220 IPSVSNGSLKFQSLTHTGKGH--HLSFSPQSQ----NGRAPPPLSFSSS-PPSPAS--SV 1270
P + L S H H L PQSQ + PP L+ S + PP PAS
Sbjct: 964 PPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPT 1023
Query: 1271 SLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS 1309
L+Q A P + G TP T TS
Sbjct: 1024 GLHQVAP------QPPFAQHPFVPGGPPPITPPTCPSTS 1056
Score = 39.7 bits (91), Expect = 0.019
Identities = 58/291 (19%), Positives = 101/291 (34%), Gaps = 31/291 (10%)
Query: 946 HYNGKEFEKLLEEAQANIMK--SIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLE 1003
H+ G+E L + + + K +P +E P P P PV + + +S +
Sbjct: 519 HHGGRENILLCTDCRIHFKKYGELPPIEKP--VDPPPFMFKPVKEEDDGLSGKHSMRTRR 576
Query: 1004 KLG-------GKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPS 1056
G G+ P P G T+ + D+ +GR A SS D+
Sbjct: 577 SRGSMSTLRSGRKKQPASP---------DGRTSPINEDIRSSGRNSPSAASTSSNDSKAE 627
Query: 1057 PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQ------ 1110
++ K EE +S + +S EE + K + +P
Sbjct: 628 TVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGES 687
Query: 1111 TSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQY---RQANGSAKKSGGDFKPTSPSLPASK 1167
+ V + P +D+ + + P ++ SA++ +P + P
Sbjct: 688 SDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGV 747
Query: 1168 IPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQ--TGPPAHS 1216
PA S + + LP+ S PP P+ + P PQ T P H+
Sbjct: 748 TPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHT 798
Score = 37.4 bits (85), Expect = 0.095
Identities = 84/386 (21%), Positives = 132/386 (34%), Gaps = 43/386 (11%)
Query: 136 PVEHLSETSADSLEAMSEG-DAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDE 194
P TS + + S G ++P+ S S + V +S + KE + L
Sbjct: 592 PASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPL------- 644
Query: 195 TKQLRMPNEITSADTIRALFVSAFPQQLT-MKMLESPSVAIYIKDESRNVYYELNDVRNI 253
K + E ++DT A S+ + + SPS +SR+V E +
Sbjct: 645 -KSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKD 703
Query: 254 QDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNS 313
D+ P+ N + + D Q++++ A+ P P P + P
Sbjct: 704 IDQDNRSTSPSIPSPQDNES----DSDSSAQQQMLQAQP--PALQAPTGVTPAPSSAPPG 757
Query: 314 PPSTPVPHSMPPSPSRIPYGGTRSMVVPG-----NATIPRDRISSLPVSRP-ISPSPSAI 367
P P P P + + P G + P A +P I P P PSP
Sbjct: 758 TPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPP 817
Query: 368 LERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGG---------HPLDVP 418
P + ++G A + +A P L+ +G S G P +P
Sbjct: 818 PHPSPHPPLQPLTGS--AGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLP 875
Query: 419 DHIIAYHRTAIRS-ASAYCNPSMQ--AEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASP 475
S A+AY + S+Q A QS + + P + L K PP +P
Sbjct: 876 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTP 935
Query: 476 HRVSDLRMIDMHAHYNAHGPPHTMQP 501
+ L H H PPH P
Sbjct: 936 --IPQLPAPQAHKH-----PPHLSGP 954
Score = 33.5 bits (75), Expect = 1.4
Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 30/269 (11%)
Query: 968 PNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGS-- 1025
P L++ P + PLP A + S++ P G P PP + ++PG
Sbjct: 986 PPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPP 1045
Query: 1026 --------GLTTTRSGDVVYTGRKENITAKASSEDAG----PSPQTRATKYPAEEPASAW 1073
+T +G + A + AG P P + + ++
Sbjct: 1046 PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPE 1105
Query: 1074 TPSPPPVTTSSSK---DEEEEEEEGDKIMAEL-QGSSGAPQTSRMPVPMS----AKNRPG 1125
+P PPP + S D + + L +G + +T +P++ AK R
Sbjct: 1106 SPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREE 1165
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
++K ++++ Q R+ R+ +K + + + S G+ S P S
Sbjct: 1166 AIEKAKREAE-QKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSD-PQLS 1223
Query: 1186 GDSSNLPN--PPATKPSIASNPLSPQTGP 1212
G P+ PP T +IA+ P P GP
Sbjct: 1224 GPGHMRPSFEPPPT--TIAAVP--PYIGP 1248
Score = 32.0 bits (71), Expect = 4.0
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 295 PGAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSL 354
P P P + HPPH SP S + ++PP P+ P + P P + +
Sbjct: 937 PQLPAPQAHKHPPHLSGPSPFS--MNANLPPPPALKPLSSLSTHHPPSAHPPP---LQLM 991
Query: 355 PVSRPISPSPS 365
P S+P+ SP+
Sbjct: 992 PQSQPLPSSPA 1002
Score = 31.6 bits (70), Expect = 5.2
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 17/83 (20%)
Query: 263 NKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGS---TAHPPHAIPNSPPSTPV 319
+K P H +P +MN ++ P A +P S T HPP A P PP +
Sbjct: 945 HKHPPHLSGPSPFSMNANL-----------PPPPALKPLSSLSTHHPPSAHP--PPLQLM 991
Query: 320 PHSMP-PSPSRIPYGGTRSMVVP 341
P S P PS P G T+S +P
Sbjct: 992 PQSQPLPSSPAQPPGLTQSQNLP 1014
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 57.0 bits (136), Expect = 1e-07
Identities = 117/519 (22%), Positives = 170/519 (32%), Gaps = 94/519 (18%)
Query: 819 EAAHTSGQ--PFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLP 876
E +SG+ P ++ + D+K+E V S V+ SSP+ Q
Sbjct: 604 EDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQRE----------- 652
Query: 877 HVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKK 936
VAS +S +Q P P G S+ +R+V+ E
Sbjct: 653 KVASDTEEADRTSSKKTKTQEISRPNSPSEG-----------EGESSDSRSVNDE----- 696
Query: 937 WEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSP 996
G K +++ + SIP+ + + D+ + L P
Sbjct: 697 ------------GSSDPKDIDQDNRSTSPSIPSPQDNESD-----SDSSAQQQMLQAQPP 739
Query: 997 NSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPS 1056
L+ G +P P PP LP G T + + + P
Sbjct: 740 ----ALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPV 795
Query: 1057 PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQT-SRMP 1115
P T + PA P +P PPP + + L GS+G P S
Sbjct: 796 PHTHIQQAPALHPQRPPSPHPPPHPSPHPP------------LQPLTGSAGQPSAPSHAQ 843
Query: 1116 VPMSAKNRPG--------TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKP-TSPSLPAS 1166
P+ + PG L PG P Q Q S P TS LPAS
Sbjct: 844 PPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPAS 903
Query: 1167 KIPALSPSSGKSSSLPSSSGDSSNLPNPPATK----PSIASNPLSPQTGPP---AHSASL 1219
+ S + LP + ++ PP T P+ ++ P P + +A+L
Sbjct: 904 QSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANL 963
Query: 1220 IPSVSNGSLKFQSLTHTGKGH--HLSFSPQSQ----NGRAPPPLSFSSS-PPSPAS--SV 1270
P + L S H H L PQSQ + PP L+ S + PP PAS
Sbjct: 964 PPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPT 1023
Query: 1271 SLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS 1309
L+Q A P + G TP T TS
Sbjct: 1024 GLHQVAP------QPPFAQHPFVPGGPPPITPPTCPSTS 1056
Score = 39.7 bits (91), Expect = 0.019
Identities = 58/291 (19%), Positives = 101/291 (34%), Gaps = 31/291 (10%)
Query: 946 HYNGKEFEKLLEEAQANIMK--SIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLE 1003
H+ G+E L + + + K +P +E P P P PV + + +S +
Sbjct: 519 HHGGRENILLCTDCRIHFKKYGELPPIEKP--VDPPPFMFKPVKEEDDGLSGKHSMRTRR 576
Query: 1004 KLG-------GKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPS 1056
G G+ P P G T+ + D+ +GR A SS D+
Sbjct: 577 SRGSMSTLRSGRKKQPASP---------DGRTSPINEDIRSSGRNSPSAASTSSNDSKAE 627
Query: 1057 PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQ------ 1110
++ K EE +S + +S EE + K + +P
Sbjct: 628 TVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGES 687
Query: 1111 TSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQY---RQANGSAKKSGGDFKPTSPSLPASK 1167
+ V + P +D+ + + P ++ SA++ +P + P
Sbjct: 688 SDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGV 747
Query: 1168 IPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQ--TGPPAHS 1216
PA S + + LP+ S PP P+ + P PQ T P H+
Sbjct: 748 TPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHT 798
Score = 37.4 bits (85), Expect = 0.095
Identities = 84/386 (21%), Positives = 132/386 (34%), Gaps = 43/386 (11%)
Query: 136 PVEHLSETSADSLEAMSEG-DAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDE 194
P TS + + S G ++P+ S S + V +S + KE + L
Sbjct: 592 PASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPL------- 644
Query: 195 TKQLRMPNEITSADTIRALFVSAFPQQLT-MKMLESPSVAIYIKDESRNVYYELNDVRNI 253
K + E ++DT A S+ + + SPS +SR+V E +
Sbjct: 645 -KSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKD 703
Query: 254 QDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNS 313
D+ P+ N + + D Q++++ A+ P P P + P
Sbjct: 704 IDQDNRSTSPSIPSPQDNES----DSDSSAQQQMLQAQP--PALQAPTGVTPAPSSAPPG 757
Query: 314 PPSTPVPHSMPPSPSRIPYGGTRSMVVPG-----NATIPRDRISSLPVSRP-ISPSPSAI 367
P P P P + + P G + P A +P I P P PSP
Sbjct: 758 TPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPP 817
Query: 368 LERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGG---------HPLDVP 418
P + ++G A + +A P L+ +G S G P +P
Sbjct: 818 PHPSPHPPLQPLTGS--AGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLP 875
Query: 419 DHIIAYHRTAIRS-ASAYCNPSMQ--AEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASP 475
S A+AY + S+Q A QS + + P + L K PP +P
Sbjct: 876 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTP 935
Query: 476 HRVSDLRMIDMHAHYNAHGPPHTMQP 501
+ L H H PPH P
Sbjct: 936 --IPQLPAPQAHKH-----PPHLSGP 954
Score = 33.5 bits (75), Expect = 1.4
Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 30/269 (11%)
Query: 968 PNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGS-- 1025
P L++ P + PLP A + S++ P G P PP + ++PG
Sbjct: 986 PPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPP 1045
Query: 1026 --------GLTTTRSGDVVYTGRKENITAKASSEDAG----PSPQTRATKYPAEEPASAW 1073
+T +G + A + AG P P + + ++
Sbjct: 1046 PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPE 1105
Query: 1074 TPSPPPVTTSSSK---DEEEEEEEGDKIMAEL-QGSSGAPQTSRMPVPMS----AKNRPG 1125
+P PPP + S D + + L +G + +T +P++ AK R
Sbjct: 1106 SPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREE 1165
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
++K ++++ Q R+ R+ +K + + + S G+ S P S
Sbjct: 1166 AIEKAKREAE-QKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSD-PQLS 1223
Query: 1186 GDSSNLPN--PPATKPSIASNPLSPQTGP 1212
G P+ PP T +IA+ P P GP
Sbjct: 1224 GPGHMRPSFEPPPT--TIAAVP--PYIGP 1248
Score = 32.0 bits (71), Expect = 4.0
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 295 PGAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSL 354
P P P + HPPH SP S + ++PP P+ P + P P + +
Sbjct: 937 PQLPAPQAHKHPPHLSGPSPFS--MNANLPPPPALKPLSSLSTHHPPSAHPPP---LQLM 991
Query: 355 PVSRPISPSPS 365
P S+P+ SP+
Sbjct: 992 PQSQPLPSSPA 1002
Score = 31.6 bits (70), Expect = 5.2
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 17/83 (20%)
Query: 263 NKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGS---TAHPPHAIPNSPPSTPV 319
+K P H +P +MN ++ P A +P S T HPP A P PP +
Sbjct: 945 HKHPPHLSGPSPFSMNANL-----------PPPPALKPLSSLSTHHPPSAHP--PPLQLM 991
Query: 320 PHSMP-PSPSRIPYGGTRSMVVP 341
P S P PS P G T+S +P
Sbjct: 992 PQSQPLPSSPAQPPGLTQSQNLP 1014
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 57.0 bits (136), Expect = 1e-07
Identities = 109/477 (22%), Positives = 150/477 (31%), Gaps = 94/477 (19%)
Query: 850 RHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQ------SPQI 903
RH SS SQ S +++ L S P+ +T++ + PQ SP
Sbjct: 407 RHPSSSSDTWSHSQSSDTIVSDGSTLSSKGGSEGQPESSTASNSVVPPPQGGSGRGSPSG 466
Query: 904 PMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD-HYNGKEF-EKLLEEAQA 961
A +L I +S R+VS+ K ++ R+ H G + L
Sbjct: 467 GSTAEASDTLSIRSSGQLSG--RSVSLRKLKRPPPPPRRTHSLHQRGLAVPDGPLGLPPK 524
Query: 962 NIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSY 1021
K P L PP TG SE G P PP P S+
Sbjct: 525 PERKQQPQLPRPPTTG-------------------GSE-------GAGAAPCPPNPANSW 558
Query: 1022 LPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVT 1081
+PG +R R + ++ SS+ P+ + P P A P P VT
Sbjct: 559 VPGLSPGGSRRPPRS-PERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVT 617
Query: 1082 T----------------SSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1125
+ SSS D + G +I+ L P ++P P S
Sbjct: 618 SLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPPSKP 677
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPAL--SPSSGKSSSLPS 1183
P P A S D P SP P + + L SP K S P
Sbjct: 678 RSPNPAA------PALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQESPVISKDQSPPP 731
Query: 1184 SSGDSSNLPNPPATKPSI----------ASNPLS----PQTGPPAHS------------- 1216
S S + P PP KP + A PL P PPA
Sbjct: 732 SPPPSYHPPPPPTKKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSMADFPPPE 791
Query: 1217 ------ASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPA 1267
AS P+ +GS + S + Q PPP + +P S A
Sbjct: 792 EAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASSA 848
Score = 48.5 bits (114), Expect = 4e-05
Identities = 76/297 (25%), Positives = 107/297 (36%), Gaps = 52/297 (17%)
Query: 956 LEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNS----EQDLEKLGGKSPP 1011
L+E+ P PP+ P P P K E+ ++P++ E+ L+ PP
Sbjct: 717 LQESPVISKDQSPPPSPPPSYHPPP---PPTKKPEVVVEAPSASETAEEPLQDPNWPPPP 773
Query: 1012 PPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPAS 1071
PP P + + + +E + AS E AGPS PA +S
Sbjct: 774 PPAPEEQDLSMAD------------FPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSS 821
Query: 1072 A--------WTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSS--GAPQTSRMPVPMSAK 1121
A +P PPP + + E G S G P + P+
Sbjct: 822 ATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAPLVT- 880
Query: 1122 NRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSG----- 1176
P L + +L+ A A KP +L P +PSSG
Sbjct: 881 --PSLL----QMVRLRSVGAPGGAPTPALGPSAPQKPLRRALSGRASPVPAPSSGLHAAV 934
Query: 1177 --KSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQ 1231
K+ SL +S G SS PN P + P PQ+ PA +AS I S GS K Q
Sbjct: 935 RLKACSLAASEGLSSAQPNGPP-----EAEPRPPQS--PASTASFI--FSKGSRKLQ 982
Score = 46.2 bits (108), Expect = 2e-04
Identities = 82/346 (23%), Positives = 126/346 (36%), Gaps = 58/346 (16%)
Query: 963 IMKSIPNLEMPPATGPLPRGDAPV---DKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRR 1019
+ K IP+ +PP + G + + L SP S + L + S P P R
Sbjct: 351 LSKLIPHAVLPPTVDVVALGRCSLRTLSRCSLHSASPASVRSLGRFSSVSSPQP-----R 405
Query: 1020 SYLPGSGLTT---TRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPS 1076
S P S T ++S D + + +++K SE S + P + S S
Sbjct: 406 SRHPSSSSDTWSHSQSSDTIVSDGS-TLSSKGGSEGQPESSTASNSVVPPPQGGSG-RGS 463
Query: 1077 PPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRP----------GT 1126
P +T+ + D G +L G S + + + P P + G
Sbjct: 464 PSGGSTAEASDTLSIRSSG-----QLSGRSVSLRKLKRPPPPPRRTHSLHQRGLAVPDGP 518
Query: 1127 LDKPGKQSKLQDPRQYRQ-ANGSAKKSGGDFKPTSPSL--------------PASKIPAL 1171
L P K + Q P+ R G ++ +G P +P+ P S L
Sbjct: 519 LGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTL 578
Query: 1172 SPSSGKSSSLPSSSGDSSNLPNPPAT-------KPSIASNPLSPQTGPPAHSASLIPSVS 1224
SPSSG SS + + L PPA+ KP ++ SP + SL S S
Sbjct: 579 SPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSS 638
Query: 1225 NGSLKFQS----LTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSP 1266
+ + +S LT G + P+ +PPP S P SP
Sbjct: 639 DPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPP----SKPRSP 680
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 57.0 bits (136), Expect = 1e-07
Identities = 67/298 (22%), Positives = 99/298 (33%), Gaps = 60/298 (20%)
Query: 996 PNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGP 1055
PN+ S PPPPPP RR+ P + L S Y K P
Sbjct: 162 PNTTSSTGMKHSSSAPPPPPPGRRANAPPTPLPMHSSKAPAYNREK-------------P 208
Query: 1056 SPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMP 1115
P T + P P+PPPV S + +G S P
Sbjct: 209 LPPTPGQRL---HPGREGPPAPPPVKPPPSP---------------VNIRTGPSGQSLAP 250
Query: 1116 VPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSS 1175
P + PG + P + P ++ N +K+ G + +P P S P+L
Sbjct: 251 PPPPYRQPPGVPNGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSL---- 306
Query: 1176 GKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTH 1235
SN P PPA P S +P PP + NG+ +
Sbjct: 307 ------------LSNRPPPPARDP--PSRGAAPPPPPPV--------IRNGA---RDAPP 341
Query: 1236 TGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQ 1293
+ + S G+ PPP S + + P P L G + + T L ++++
Sbjct: 342 PPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRDSITTVRSFLDDFESK 399
Score = 33.9 bits (76), Expect = 1.1
Identities = 73/275 (26%), Positives = 103/275 (37%), Gaps = 39/275 (14%)
Query: 1010 PPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEP 1069
PPPPPPPP P T + R E A +D T+ K
Sbjct: 4 PPPPPPPPGPPPPPTFHQANTEQPKL---SRDEQRGRGALLQDICKG--TKLKKVTNIND 58
Query: 1070 ASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPV-PMSAKNRPGTL- 1127
SA P+ G A LQ G Q + + P+ AK+ L
Sbjct: 59 RSA------PILEKPKGSSGGYGSGG----AALQPKGGLFQGGVLKLRPVGAKDGSENLA 108
Query: 1128 DKPGKQ---SKLQDPRQ-YRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPS 1183
KP Q S+ PR A+G + + + P LP + P+L S +++ +
Sbjct: 109 GKPALQIPSSRAAAPRPPVSAASGRPQDDTDSSRASLPELPRMQRPSLPDLSRPNTTSST 168
Query: 1184 SSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLS 1243
SS+ P PP P +N +P T P HS S P+ + + + L T G L
Sbjct: 169 GMKHSSSAPPPP--PPGRRAN--APPTPLPMHS-SKAPAYN----REKPLPPT-PGQRL- 217
Query: 1244 FSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKG 1278
P + APPP+ PPSP V++ G G
Sbjct: 218 -HPGREGPPAPPPV---KPPPSP---VNIRTGPSG 245
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 56.2 bits (134), Expect = 2e-07
Identities = 81/324 (25%), Positives = 120/324 (37%), Gaps = 64/324 (19%)
Query: 1009 SPPPPPPPPRRSYLPGS-----------GLTTTRSGDVVYTGRKENIT--------AKAS 1049
+PPPPP P P S G T DV GR+ T A+
Sbjct: 225 APPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPK 284
Query: 1050 SEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEE----EEGDKIMAELQGS 1105
GP+P+ T P S P P PV TSS +E +E EEG +
Sbjct: 285 GSALGPNPEPHLTF-----PRSFKVPPPTPVRTSSIPVQEAQEAPRKEEG--------AT 331
Query: 1106 SGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYR----------QANGSAKKSGGD 1155
AP SR+P+P S RP + P + + P + + Q+ A + G
Sbjct: 332 KKAP--SRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGT 389
Query: 1156 FKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPA--TKPSIASNP-LSPQTGP 1212
P +P LP P P+ + P + +PPA TK +S+P L P+ P
Sbjct: 390 -PPPAPPLPPPAPPLPPPAPPLPPAAPPLP-CAQKAAHPPAGFTKTPKSSSPALKPKPNP 447
Query: 1213 PA--HSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSV 1270
P+ ++AS P + + L + + + + F S P P +
Sbjct: 448 PSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDR---------FLSHRPGPTVAP 498
Query: 1271 SLNQGAKGTRTIHTPSLTSYKAQN 1294
+G KG R +L S A++
Sbjct: 499 QSKEGKKGPRLPEKETLLSLPAKD 522
Score = 41.6 bits (96), Expect = 0.005
Identities = 85/376 (22%), Positives = 133/376 (35%), Gaps = 49/376 (13%)
Query: 968 PNLEMPPATGPLP-RGDAPVDKVELSEDSP------NSEQDLEKLGGKSPPPPPPPPRRS 1020
P+ + PA+ P R P EL +P S+ ++ G PP PP PP
Sbjct: 342 PSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAP 401
Query: 1021 YLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP-AEEPASAWTPSPP- 1078
LP + + +K P TK P + PA P+PP
Sbjct: 402 PLPPPAPPLPPAAPPLPCAQK------------AAHPPAGFTKTPKSSSPALKPKPNPPS 449
Query: 1079 PVTTSSS-----KDEEEEEEEGDKIMAELQGS-------SGAPQTSRMPVPMSAKNRPGT 1126
P T+SS +D + E+ +++ A L GS S P + P K P
Sbjct: 450 PENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRFLSHRPGPTVAPQSKEGKKGPRL 509
Query: 1127 LDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALS--PSSGKSSSLPSS 1184
P K++ L P + K GG + + P+ +P++ P + S+
Sbjct: 510 ---PEKETLLSLPAKDTPPGVPEKSLGGSSLTETEAAPSLTLPSVDYIPQDSPTPSVRQI 566
Query: 1185 SGDSSNLPNPPA---TKPSIASNPLSP--QTGPPAHSASLIPSVSNGSLKFQSLTHTGKG 1239
+ + A KPSI S P P + G + + +S K T
Sbjct: 567 RNELEARLSSAAEKEAKPSIGSLPPKPRLEGGRICENGADDDKLSKPVAKNLPPQSTTLL 626
Query: 1240 HHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTP------SLTSYKAQ 1293
S P++ G A PP + P +++ K T TP T KA
Sbjct: 627 PTTSLQPKAMLGPAIPPKATPEPAIPPKATLWPATPPKATLGPATPLKATSGPTTPLKAT 686
Query: 1294 NGSSSKATPSTAKETS 1309
+G + +T +T T+
Sbjct: 687 SGPAIASTATTLPTTT 702
Score = 38.1 bits (87), Expect = 0.056
Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 16/140 (11%)
Query: 1169 PALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSL 1228
P P+ G + G S LP+PP+T P PL + PP A P V
Sbjct: 142 PPPGPAPGPPQDISEPPGGSP-LPSPPSTAPP--PPPLLLEPPPPPSMAPPPPPVLEALS 198
Query: 1229 KFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSP----PSPASSVSLNQGAKGTRTIHT 1284
+L+ F P + PPL+F + P P+PA + GTR
Sbjct: 199 PPHTLSSPSIPTPPDFIPPA------PPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPP 252
Query: 1285 PSLTSYK---AQNGSSSKAT 1301
+T +K A NG ++AT
Sbjct: 253 GGVTKWKSDVALNGRQAEAT 272
Score = 37.7 bits (86), Expect = 0.073
Identities = 75/319 (23%), Positives = 107/319 (33%), Gaps = 56/319 (17%)
Query: 995 SPNSEQDLEKLGGKSP--------PPPPP------------PPRRSYLPGSGLTTTRSGD 1034
+P QD+ + G SP PPPPP PP L T S
Sbjct: 147 APGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSP 206
Query: 1035 VVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPS----PPPVTTS------- 1083
+ T A + A P P A PA PAS T PP T
Sbjct: 207 SIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPA--PASPHTVGTRLFPPGGVTKWKSDVAL 264
Query: 1084 SSKDEEEEEEEGDKIMAELQGSSGAPQTS-RMPVPMSAKNRPGTLDKPGKQSKLQDPRQY 1142
+ + E + AE +GS+ P + P S K P T + +
Sbjct: 265 NGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAP 324
Query: 1143 RQANGSAKKSGGDFKPTSPSL---PASKI--------------PALSPSSGKSSSLPSSS 1185
R+ G+ KK+ P PS PAS++ A +P+S + S +
Sbjct: 325 RKEEGATKKAPSRL-PLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQA 383
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
+ + P PPA + PL P P +A +P + T T K +
Sbjct: 384 DERAGTP-PPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALK 442
Query: 1246 PQSQNGRAPPPLSFSSSPP 1264
P+ P P + +SS P
Sbjct: 443 PKP---NPPSPENTASSAP 458
Score = 32.3 bits (72), Expect = 3.1
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 296 GAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSP-----SRIPYGGTRSMVVPGNATIPRDR 350
G P P PP A P PP+ P+P + PP P + P G T++ A P+
Sbjct: 388 GTPPPAPPLPPP-APPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALKPKPN 446
Query: 351 ISSLPVSRPISPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIA 407
S P + + SA ++ RD E + + +A Y D +L H ++A
Sbjct: 447 PPS-----PENTASSAPVDWRDPSQMEKLRNE-LAAYLCGSRREDRFLSHRPGPTVA 497
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 56.2 bits (134), Expect = 2e-07
Identities = 81/324 (25%), Positives = 120/324 (37%), Gaps = 64/324 (19%)
Query: 1009 SPPPPPPPPRRSYLPGS-----------GLTTTRSGDVVYTGRKENIT--------AKAS 1049
+PPPPP P P S G T DV GR+ T A+
Sbjct: 225 APPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPK 284
Query: 1050 SEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEE----EEGDKIMAELQGS 1105
GP+P+ T P S P P PV TSS +E +E EEG +
Sbjct: 285 GSALGPNPEPHLTF-----PRSFKVPPPTPVRTSSIPVQEAQEAPRKEEG--------AT 331
Query: 1106 SGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYR----------QANGSAKKSGGD 1155
AP SR+P+P S RP + P + + P + + Q+ A + G
Sbjct: 332 KKAP--SRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGT 389
Query: 1156 FKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPA--TKPSIASNP-LSPQTGP 1212
P +P LP P P+ + P + +PPA TK +S+P L P+ P
Sbjct: 390 -PPPAPPLPPPAPPLPPPAPPLPPAAPPLP-CAQKAAHPPAGFTKTPKSSSPALKPKPNP 447
Query: 1213 PA--HSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSV 1270
P+ ++AS P + + L + + + + F S P P +
Sbjct: 448 PSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDR---------FLSHRPGPTVAP 498
Query: 1271 SLNQGAKGTRTIHTPSLTSYKAQN 1294
+G KG R +L S A++
Sbjct: 499 QSKEGKKGPRLPEKETLLSLPAKD 522
Score = 41.6 bits (96), Expect = 0.005
Identities = 85/376 (22%), Positives = 133/376 (35%), Gaps = 49/376 (13%)
Query: 968 PNLEMPPATGPLP-RGDAPVDKVELSEDSP------NSEQDLEKLGGKSPPPPPPPPRRS 1020
P+ + PA+ P R P EL +P S+ ++ G PP PP PP
Sbjct: 342 PSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAP 401
Query: 1021 YLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP-AEEPASAWTPSPP- 1078
LP + + +K P TK P + PA P+PP
Sbjct: 402 PLPPPAPPLPPAAPPLPCAQK------------AAHPPAGFTKTPKSSSPALKPKPNPPS 449
Query: 1079 PVTTSSS-----KDEEEEEEEGDKIMAELQGS-------SGAPQTSRMPVPMSAKNRPGT 1126
P T+SS +D + E+ +++ A L GS S P + P K P
Sbjct: 450 PENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRFLSHRPGPTVAPQSKEGKKGPRL 509
Query: 1127 LDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALS--PSSGKSSSLPSS 1184
P K++ L P + K GG + + P+ +P++ P + S+
Sbjct: 510 ---PEKETLLSLPAKDTPPGVPEKSLGGSSLTETEAAPSLTLPSVDYIPQDSPTPSVRQI 566
Query: 1185 SGDSSNLPNPPA---TKPSIASNPLSP--QTGPPAHSASLIPSVSNGSLKFQSLTHTGKG 1239
+ + A KPSI S P P + G + + +S K T
Sbjct: 567 RNELEARLSSAAEKEAKPSIGSLPPKPRLEGGRICENGADDDKLSKPVAKNLPPQSTTLL 626
Query: 1240 HHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTP------SLTSYKAQ 1293
S P++ G A PP + P +++ K T TP T KA
Sbjct: 627 PTTSLQPKAMLGPAIPPKATPEPAIPPKATLWPATPPKATLGPATPLKATSGPTTPLKAT 686
Query: 1294 NGSSSKATPSTAKETS 1309
+G + +T +T T+
Sbjct: 687 SGPAIASTATTLPTTT 702
Score = 38.1 bits (87), Expect = 0.056
Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 16/140 (11%)
Query: 1169 PALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSL 1228
P P+ G + G S LP+PP+T P PL + PP A P V
Sbjct: 142 PPPGPAPGPPQDISEPPGGSP-LPSPPSTAPP--PPPLLLEPPPPPSMAPPPPPVLEALS 198
Query: 1229 KFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSP----PSPASSVSLNQGAKGTRTIHT 1284
+L+ F P + PPL+F + P P+PA + GTR
Sbjct: 199 PPHTLSSPSIPTPPDFIPPA------PPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPP 252
Query: 1285 PSLTSYK---AQNGSSSKAT 1301
+T +K A NG ++AT
Sbjct: 253 GGVTKWKSDVALNGRQAEAT 272
Score = 37.7 bits (86), Expect = 0.073
Identities = 75/319 (23%), Positives = 107/319 (33%), Gaps = 56/319 (17%)
Query: 995 SPNSEQDLEKLGGKSP--------PPPPP------------PPRRSYLPGSGLTTTRSGD 1034
+P QD+ + G SP PPPPP PP L T S
Sbjct: 147 APGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSP 206
Query: 1035 VVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPS----PPPVTTS------- 1083
+ T A + A P P A PA PAS T PP T
Sbjct: 207 SIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPA--PASPHTVGTRLFPPGGVTKWKSDVAL 264
Query: 1084 SSKDEEEEEEEGDKIMAELQGSSGAPQTS-RMPVPMSAKNRPGTLDKPGKQSKLQDPRQY 1142
+ + E + AE +GS+ P + P S K P T + +
Sbjct: 265 NGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAP 324
Query: 1143 RQANGSAKKSGGDFKPTSPSL---PASKI--------------PALSPSSGKSSSLPSSS 1185
R+ G+ KK+ P PS PAS++ A +P+S + S +
Sbjct: 325 RKEEGATKKAPSRL-PLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQA 383
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
+ + P PPA + PL P P +A +P + T T K +
Sbjct: 384 DERAGTP-PPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALK 442
Query: 1246 PQSQNGRAPPPLSFSSSPP 1264
P+ P P + +SS P
Sbjct: 443 PKP---NPPSPENTASSAP 458
Score = 32.3 bits (72), Expect = 3.1
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 296 GAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSP-----SRIPYGGTRSMVVPGNATIPRDR 350
G P P PP A P PP+ P+P + PP P + P G T++ A P+
Sbjct: 388 GTPPPAPPLPPP-APPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALKPKPN 446
Query: 351 ISSLPVSRPISPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIA 407
S P + + SA ++ RD E + + +A Y D +L H ++A
Sbjct: 447 PPS-----PENTASSAPVDWRDPSQMEKLRNE-LAAYLCGSRREDRFLSHRPGPTVA 497
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sapiens]
Length = 1188
Score = 56.2 bits (134), Expect = 2e-07
Identities = 81/324 (25%), Positives = 120/324 (37%), Gaps = 64/324 (19%)
Query: 1009 SPPPPPPPPRRSYLPGS-----------GLTTTRSGDVVYTGRKENIT--------AKAS 1049
+PPPPP P P S G T DV GR+ T A+
Sbjct: 225 APPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPK 284
Query: 1050 SEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEE----EEGDKIMAELQGS 1105
GP+P+ T P S P P PV TSS +E +E EEG +
Sbjct: 285 GSALGPNPEPHLTF-----PRSFKVPPPTPVRTSSIPVQEAQEAPRKEEG--------AT 331
Query: 1106 SGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYR----------QANGSAKKSGGD 1155
AP SR+P+P S RP + P + + P + + Q+ A + G
Sbjct: 332 KKAP--SRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGT 389
Query: 1156 FKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPA--TKPSIASNP-LSPQTGP 1212
P +P LP P P+ + P + +PPA TK +S+P L P+ P
Sbjct: 390 -PPPAPPLPPPAPPLPPPAPPLPPAAPPLP-CAQKAAHPPAGFTKTPKSSSPALKPKPNP 447
Query: 1213 PA--HSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSV 1270
P+ ++AS P + + L + + + + F S P P +
Sbjct: 448 PSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDR---------FLSHRPGPTVAP 498
Query: 1271 SLNQGAKGTRTIHTPSLTSYKAQN 1294
+G KG R +L S A++
Sbjct: 499 QSKEGKKGPRLPEKETLLSLPAKD 522
Score = 41.6 bits (96), Expect = 0.005
Identities = 85/376 (22%), Positives = 133/376 (35%), Gaps = 49/376 (13%)
Query: 968 PNLEMPPATGPLP-RGDAPVDKVELSEDSP------NSEQDLEKLGGKSPPPPPPPPRRS 1020
P+ + PA+ P R P EL +P S+ ++ G PP PP PP
Sbjct: 342 PSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAP 401
Query: 1021 YLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP-AEEPASAWTPSPP- 1078
LP + + +K P TK P + PA P+PP
Sbjct: 402 PLPPPAPPLPPAAPPLPCAQK------------AAHPPAGFTKTPKSSSPALKPKPNPPS 449
Query: 1079 PVTTSSS-----KDEEEEEEEGDKIMAELQGS-------SGAPQTSRMPVPMSAKNRPGT 1126
P T+SS +D + E+ +++ A L GS S P + P K P
Sbjct: 450 PENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRFLSHRPGPTVAPQSKEGKKGPRL 509
Query: 1127 LDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALS--PSSGKSSSLPSS 1184
P K++ L P + K GG + + P+ +P++ P + S+
Sbjct: 510 ---PEKETLLSLPAKDTPPGVPEKSLGGSSLTETEAAPSLTLPSVDYIPQDSPTPSVRQI 566
Query: 1185 SGDSSNLPNPPA---TKPSIASNPLSP--QTGPPAHSASLIPSVSNGSLKFQSLTHTGKG 1239
+ + A KPSI S P P + G + + +S K T
Sbjct: 567 RNELEARLSSAAEKEAKPSIGSLPPKPRLEGGRICENGADDDKLSKPVAKNLPPQSTTLL 626
Query: 1240 HHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTP------SLTSYKAQ 1293
S P++ G A PP + P +++ K T TP T KA
Sbjct: 627 PTTSLQPKAMLGPAIPPKATPEPAIPPKATLWPATPPKATLGPATPLKATSGPTTPLKAT 686
Query: 1294 NGSSSKATPSTAKETS 1309
+G + +T +T T+
Sbjct: 687 SGPAIASTATTLPTTT 702
Score = 38.1 bits (87), Expect = 0.056
Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 16/140 (11%)
Query: 1169 PALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSL 1228
P P+ G + G S LP+PP+T P PL + PP A P V
Sbjct: 142 PPPGPAPGPPQDISEPPGGSP-LPSPPSTAPP--PPPLLLEPPPPPSMAPPPPPVLEALS 198
Query: 1229 KFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSP----PSPASSVSLNQGAKGTRTIHT 1284
+L+ F P + PPL+F + P P+PA + GTR
Sbjct: 199 PPHTLSSPSIPTPPDFIPPA------PPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPP 252
Query: 1285 PSLTSYK---AQNGSSSKAT 1301
+T +K A NG ++AT
Sbjct: 253 GGVTKWKSDVALNGRQAEAT 272
Score = 37.7 bits (86), Expect = 0.073
Identities = 75/319 (23%), Positives = 107/319 (33%), Gaps = 56/319 (17%)
Query: 995 SPNSEQDLEKLGGKSP--------PPPPP------------PPRRSYLPGSGLTTTRSGD 1034
+P QD+ + G SP PPPPP PP L T S
Sbjct: 147 APGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSP 206
Query: 1035 VVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPS----PPPVTTS------- 1083
+ T A + A P P A PA PAS T PP T
Sbjct: 207 SIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPA--PASPHTVGTRLFPPGGVTKWKSDVAL 264
Query: 1084 SSKDEEEEEEEGDKIMAELQGSSGAPQTS-RMPVPMSAKNRPGTLDKPGKQSKLQDPRQY 1142
+ + E + AE +GS+ P + P S K P T + +
Sbjct: 265 NGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAP 324
Query: 1143 RQANGSAKKSGGDFKPTSPSL---PASKI--------------PALSPSSGKSSSLPSSS 1185
R+ G+ KK+ P PS PAS++ A +P+S + S +
Sbjct: 325 RKEEGATKKAPSRL-PLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQA 383
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
+ + P PPA + PL P P +A +P + T T K +
Sbjct: 384 DERAGTP-PPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALK 442
Query: 1246 PQSQNGRAPPPLSFSSSPP 1264
P+ P P + +SS P
Sbjct: 443 PKP---NPPSPENTASSAP 458
Score = 32.3 bits (72), Expect = 3.1
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 296 GAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSP-----SRIPYGGTRSMVVPGNATIPRDR 350
G P P PP A P PP+ P+P + PP P + P G T++ A P+
Sbjct: 388 GTPPPAPPLPPP-APPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALKPKPN 446
Query: 351 ISSLPVSRPISPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIA 407
S P + + SA ++ RD E + + +A Y D +L H ++A
Sbjct: 447 PPS-----PENTASSAPVDWRDPSQMEKLRNE-LAAYLCGSRREDRFLSHRPGPTVA 497
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 55.8 bits (133), Expect = 3e-07
Identities = 80/340 (23%), Positives = 124/340 (36%), Gaps = 60/340 (17%)
Query: 1011 PPPPPPPRRSYLP----------GSGLTTTRSGDV-VYTGRK-ENITAKASSEDAGPSPQ 1058
PP PPP + P GS L++ + + + GR E T+ A E G S
Sbjct: 1451 PPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRSTEEATSSALPEKPGDSEV 1510
Query: 1059 TRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAE-LQGSSGAPQTSRMPVP 1117
+ + EE SA P PP T+ S K E ++A+ +SG +S V
Sbjct: 1511 SASAASLLEEQQSAQLPQAPPQTSDSVKKEP--------VLAQPAVSNSGTAASSTSLVA 1562
Query: 1118 MSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSP-SLPASKIPALSPS-- 1174
+SA+ P T P +++ P G + P ++ S P S +
Sbjct: 1563 LSAEATPATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTS 1622
Query: 1175 ------SGKSSSLPSSSGDSSNLPNPPATKPSIASNPLS--------------------- 1207
S ++++ + + SS PPA S A N L+
Sbjct: 1623 IVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSATPVFGQVAASTA 1682
Query: 1208 -----PQTGPPAHSASLIPSVSNGSLKFQSLTHTGKG--HHLSFSPQSQNGRAPPPLS-- 1258
QTG A +A+ P VS+ + T G +F S G++ +
Sbjct: 1683 PSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASV 1742
Query: 1259 FSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSS 1298
FS S P +S + Q A T T + S+ + SSS
Sbjct: 1743 FSFSQPGFSSVPAFGQPASSTPTSTSGSVFGAASSTSSSS 1782
Score = 50.4 bits (119), Expect = 1e-05
Identities = 72/293 (24%), Positives = 105/293 (35%), Gaps = 45/293 (15%)
Query: 962 NIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKS-------PPPPP 1014
+++K+ L + P G P +P S Q +KL + PP P
Sbjct: 412 SLIKTPERLSLEGERQPKSPGSTPT--------TPTSSQAPQKLDASAAAAPASLPPSSP 463
Query: 1015 PPPRRSY--LPGSGLTTTRS-------GDVVYTGRKENITAKASSEDAGPSPQTRATKY- 1064
P ++ LP G T S TG + ++ + S A P P +
Sbjct: 464 AAPIATFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPSYSSGSDSSKAAPGPGPSTFSFV 523
Query: 1065 PAEEPASAWTPSPPPVTTSSSK--------DEEEEEEEGDKIMAE--LQGSSGAPQTSRM 1114
P + + A TP+ PV S++ E + A S P TS +
Sbjct: 524 PPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAV 583
Query: 1115 PVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPS 1174
V +S K P S+ P + SG PT S P S +P
Sbjct: 584 KVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPL---- 639
Query: 1175 SGKSSSLPSSSGDS---SNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVS 1224
KSS LPS SG S S+ P P + S P + + G P + SL P+V+
Sbjct: 640 --KSSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPAAKPGSP-QAKSLQPAVA 689
Score = 41.6 bits (96), Expect = 0.005
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 1167 KIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNG 1226
K P +P++ SS P D+S P + PS + P++ + PA A + S +
Sbjct: 429 KSPGSTPTTPTSSQAPQKL-DASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSS 487
Query: 1227 SLKFQSLTHTGKG-HHLSFSPQSQNGRAPPPLSFSSSPPSPAS 1268
SLK S T TG+ + S S S+ P P +FS PPS AS
Sbjct: 488 SLK-SSATVTGEPPSYSSGSDSSKAAPGPGPSTFSFVPPSKAS 529
Score = 31.2 bits (69), Expect = 6.8
Identities = 48/196 (24%), Positives = 74/196 (37%), Gaps = 33/196 (16%)
Query: 1143 RQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGK-------SSSLPSSSGDSSNLPNPP 1195
++ + SA + P+SP+ P + +L P+ G SSSL SS+ + PP
Sbjct: 445 QKLDASAAAAPASLPPSSPAAPIATF-SLLPAGGAPTVFSFGSSSLKSSATVTGE---PP 500
Query: 1196 ATKPSIASNPLSPQTGP------PAHSASL--IPSVSNGSLKFQSLTHTGKGHHLSFSPQ 1247
+ S+ +P GP P ASL P+ S + S + G +
Sbjct: 501 SYSSGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLEST 560
Query: 1248 SQNGRAPPPLSFSSSPPSPASSVSLNQGAKGT-RTIHTP-------------SLTSYKAQ 1293
+ P ++ S P S+V +N K T TP S S A
Sbjct: 561 PVPSVSAPNIAMKPSFPPSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAA 620
Query: 1294 NGSSSKATPSTAKETS 1309
+G S TP +A +S
Sbjct: 621 SGPLSHPTPLSAPPSS 636
Score = 31.2 bits (69), Expect = 6.8
Identities = 44/173 (25%), Positives = 61/173 (35%), Gaps = 34/173 (19%)
Query: 1139 PRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLP-NPPAT 1197
P + A SGG KP+ ++P S P S + S++ P SS+ P P T
Sbjct: 1244 PSTKESSQPDAFSSGGGSKPSYEAIPESSPP--SGITSASNTTPGEPAASSSRPVAPSGT 1301
Query: 1198 KPSIASNPLSPQTGPPAHSASLIPSVSNGSL-----------KFQSLTHTGKGHHLSFS- 1245
S S+ L +T P L PS G S T K S +
Sbjct: 1302 ALSTTSSKL--ETPPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTS 1359
Query: 1246 ---------PQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTS 1289
P N APP L + PP +S+ T ++ P+ TS
Sbjct: 1360 TQPTKTSGVPSGFNFTAPPVLGKHTEPPVTSSAT--------TTSVAPPAATS 1404
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 55.8 bits (133), Expect = 3e-07
Identities = 80/369 (21%), Positives = 122/369 (33%), Gaps = 43/369 (11%)
Query: 957 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---- 1012
+E +KS P PA P AP E +P + ++ K P P
Sbjct: 230 KEPTPTTIKSAPTTPKEPA--PTTTKSAPTTP---KEPAPTTTKEPAPTTPKEPAPTTTK 284
Query: 1013 -PPPPPRRSY--LPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA--- 1066
P P +S P TT T ++ T P TK PA
Sbjct: 285 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 344
Query: 1067 -EEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1125
+EPA P P T +E A +P T + P P + K+ P
Sbjct: 345 PKEPAPTAPKKPAPTTPKEPAPTTPKEP------APTTTKEPSPTTPKEPAPTTTKSAPT 398
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
T +P + P ++ + + K PT+P PA P + P++
Sbjct: 399 TTKEPAPTTTKSAPTTPKEPSPTTTKEPA---PTTPKEPAPTTPKKPAPTTPKEPAPTTP 455
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
+ P P TK + P P P +A P + LT T +
Sbjct: 456 KE----PAPTTTKKPAPTTPKEPAPTTPKETAPTTP---------KKLTPTTPEKLAPTT 502
Query: 1246 PQSQNGRAPPPLSFSS----SPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-A 1300
P+ P L+ ++ +P +P A T P+ T+ K ++ K
Sbjct: 503 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 562
Query: 1301 TPSTAKETS 1309
P+T KET+
Sbjct: 563 APTTPKETA 571
Score = 54.3 bits (129), Expect = 8e-07
Identities = 86/399 (21%), Positives = 131/399 (32%), Gaps = 54/399 (13%)
Query: 956 LEEAQANIMKSIPNLEMP---PATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSP-- 1010
+++ + N K P + P A L GD V + S N K+ P
Sbjct: 66 VKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPIN 125
Query: 1011 PPPPPPPRRSYLPGSGLT-----------TTRSGDVVYTGRKENITA--------KASSE 1051
P P PP + LT TT + T KE T+ K S++
Sbjct: 126 PRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAK 185
Query: 1052 DAGPSPQTRA---------TKYPA------------EEPASAWTPSPPPVTTSSSKDEEE 1090
D P+ + A TK PA +EPAS P P T S+ +
Sbjct: 186 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK 245
Query: 1091 EEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN-RPGTLDKPGKQSKLQDPRQYRQANGSA 1149
E A AP T++ P P + K P T +P + P ++ +
Sbjct: 246 EPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT 305
Query: 1150 KKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQ 1209
K PT+P PA P + P++ + P PA P +P+
Sbjct: 306 PKKPA---PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK 362
Query: 1210 TGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASS 1269
P P+ + K S T + + + P P + S+P +P
Sbjct: 363 EPAPTTPKEPAPTTT----KEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 418
Query: 1270 VSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-ATPSTAKE 1307
T P+ T+ K ++ K P+T KE
Sbjct: 419 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 457
Score = 53.5 bits (127), Expect = 1e-06
Identities = 80/364 (21%), Positives = 119/364 (32%), Gaps = 39/364 (10%)
Query: 957 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPP 1016
E A K P PA P+ AP +L+ +P EKL +P P P
Sbjct: 457 EPAPTTTKKPAPTTPKEPAP-TTPKETAPTTPKKLTPTTP------EKLAPTTPEKPAPT 509
Query: 1017 PRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA----EEPA-- 1070
P TT T KA++ + P K PA +EPA
Sbjct: 510 TPEELAP----TTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 565
Query: 1071 -----SAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1125
+ TP TT ++ K +A T P P + K
Sbjct: 566 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 625
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
T K + ++P G+A + + PT+P PA K L+P++ K + S++
Sbjct: 626 TTPKEPAPTTPKEPAP-TTPKGTAPTTLKEPAPTTPKKPAPK--ELAPTTTKGPT--STT 680
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
D P T P+ P PA + P + + + T H S
Sbjct: 681 SDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPD 740
Query: 1246 PQSQNGRA-PPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPST 1304
+ A P P + +SP P G T TP+ T + + K T
Sbjct: 741 ESTPELSAEPTPKALENSPKEP-----------GVPTTKTPAATKPEMTTTAKDKTTERD 789
Query: 1305 AKET 1308
+ T
Sbjct: 790 LRTT 793
Score = 45.1 bits (105), Expect = 5e-04
Identities = 69/306 (22%), Positives = 100/306 (32%), Gaps = 20/306 (6%)
Query: 871 PAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSI 930
PA P A++P P+E T AP +P+ P + +E + K A +
Sbjct: 530 PAPTTPK-AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP------KETAPTTPKGTAPTT 582
Query: 931 EKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPL-PRGDAPVDKV 989
K K+ KE + + P P T P P+ AP
Sbjct: 583 LKEPAPTTPKKPA-----PKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 637
Query: 990 ELSEDSPNSEQDLE-KLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAK- 1047
E + +P K + P P P + G T+T S T KE
Sbjct: 638 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 697
Query: 1048 ---ASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1104
A + P+P T T P S T + P T S DE E + L+
Sbjct: 698 KEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALEN 757
Query: 1105 SSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLP 1164
S P P + K T K ++ +D R + +A K + T+
Sbjct: 758 SPKEPGVPTTKTPAATKPEMTTTAK--DKTTERDLRTTPETTTAAPKMTKETATTTEKTT 815
Query: 1165 ASKIPA 1170
SKI A
Sbjct: 816 ESKITA 821
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 55.8 bits (133), Expect = 3e-07
Identities = 80/369 (21%), Positives = 122/369 (33%), Gaps = 43/369 (11%)
Query: 957 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---- 1012
+E +KS P PA P AP E +P + ++ K P P
Sbjct: 271 KEPTPTTIKSAPTTPKEPA--PTTTKSAPTTP---KEPAPTTTKEPAPTTPKEPAPTTTK 325
Query: 1013 -PPPPPRRSY--LPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA--- 1066
P P +S P TT T ++ T P TK PA
Sbjct: 326 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 385
Query: 1067 -EEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1125
+EPA P P T +E A +P T + P P + K+ P
Sbjct: 386 PKEPAPTAPKKPAPTTPKEPAPTTPKEP------APTTTKEPSPTTPKEPAPTTTKSAPT 439
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
T +P + P ++ + + K PT+P PA P + P++
Sbjct: 440 TTKEPAPTTTKSAPTTPKEPSPTTTKEPA---PTTPKEPAPTTPKKPAPTTPKEPAPTTP 496
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
+ P P TK + P P P +A P + LT T +
Sbjct: 497 KE----PAPTTTKKPAPTTPKEPAPTTPKETAPTTP---------KKLTPTTPEKLAPTT 543
Query: 1246 PQSQNGRAPPPLSFSS----SPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-A 1300
P+ P L+ ++ +P +P A T P+ T+ K ++ K
Sbjct: 544 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 603
Query: 1301 TPSTAKETS 1309
P+T KET+
Sbjct: 604 APTTPKETA 612
Score = 54.3 bits (129), Expect = 8e-07
Identities = 86/399 (21%), Positives = 131/399 (32%), Gaps = 54/399 (13%)
Query: 956 LEEAQANIMKSIPNLEMP---PATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSP-- 1010
+++ + N K P + P A L GD V + S N K+ P
Sbjct: 107 VKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPIN 166
Query: 1011 PPPPPPPRRSYLPGSGLT-----------TTRSGDVVYTGRKENITA--------KASSE 1051
P P PP + LT TT + T KE T+ K S++
Sbjct: 167 PRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAK 226
Query: 1052 DAGPSPQTRA---------TKYPA------------EEPASAWTPSPPPVTTSSSKDEEE 1090
D P+ + A TK PA +EPAS P P T S+ +
Sbjct: 227 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK 286
Query: 1091 EEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN-RPGTLDKPGKQSKLQDPRQYRQANGSA 1149
E A AP T++ P P + K P T +P + P ++ +
Sbjct: 287 EPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT 346
Query: 1150 KKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQ 1209
K PT+P PA P + P++ + P PA P +P+
Sbjct: 347 PKKPA---PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK 403
Query: 1210 TGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASS 1269
P P+ + K S T + + + P P + S+P +P
Sbjct: 404 EPAPTTPKEPAPTTT----KEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 459
Query: 1270 VSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-ATPSTAKE 1307
T P+ T+ K ++ K P+T KE
Sbjct: 460 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 498
Score = 53.5 bits (127), Expect = 1e-06
Identities = 80/364 (21%), Positives = 119/364 (32%), Gaps = 39/364 (10%)
Query: 957 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPP 1016
E A K P PA P+ AP +L+ +P EKL +P P P
Sbjct: 498 EPAPTTTKKPAPTTPKEPAP-TTPKETAPTTPKKLTPTTP------EKLAPTTPEKPAPT 550
Query: 1017 PRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA----EEPA-- 1070
P TT T KA++ + P K PA +EPA
Sbjct: 551 TPEELAP----TTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 606
Query: 1071 -----SAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1125
+ TP TT ++ K +A T P P + K
Sbjct: 607 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 666
Query: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
T K + ++P G+A + + PT+P PA K L+P++ K + S++
Sbjct: 667 TTPKEPAPTTPKEPAP-TTPKGTAPTTLKEPAPTTPKKPAPK--ELAPTTTKGPT--STT 721
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
D P T P+ P PA + P + + + T H S
Sbjct: 722 SDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPD 781
Query: 1246 PQSQNGRA-PPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPST 1304
+ A P P + +SP P G T TP+ T + + K T
Sbjct: 782 ESTPELSAEPTPKALENSPKEP-----------GVPTTKTPAATKPEMTTTAKDKTTERD 830
Query: 1305 AKET 1308
+ T
Sbjct: 831 LRTT 834
Score = 45.1 bits (105), Expect = 5e-04
Identities = 69/306 (22%), Positives = 100/306 (32%), Gaps = 20/306 (6%)
Query: 871 PAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSI 930
PA P A++P P+E T AP +P+ P + +E + K A +
Sbjct: 571 PAPTTPK-AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP------KETAPTTPKGTAPTT 623
Query: 931 EKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPL-PRGDAPVDKV 989
K K+ KE + + P P T P P+ AP
Sbjct: 624 LKEPAPTTPKKPA-----PKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 678
Query: 990 ELSEDSPNSEQDLE-KLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAK- 1047
E + +P K + P P P + G T+T S T KE
Sbjct: 679 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 738
Query: 1048 ---ASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1104
A + P+P T T P S T + P T S DE E + L+
Sbjct: 739 KEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALEN 798
Query: 1105 SSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLP 1164
S P P + K T K ++ +D R + +A K + T+
Sbjct: 799 SPKEPGVPTTKTPAATKPEMTTTAK--DKTTERDLRTTPETTTAAPKMTKETATTTEKTT 856
Query: 1165 ASKIPA 1170
SKI A
Sbjct: 857 ESKITA 862
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 55.8 bits (133), Expect = 3e-07
Identities = 142/702 (20%), Positives = 245/702 (34%), Gaps = 87/702 (12%)
Query: 653 KVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDSTAASRLVT 712
KVM K + V +R +E+E +K L E + V E+L K
Sbjct: 812 KVMGIPKETAERVGPERGPLERETEKLLPERQTDVTG-------EEELTKGK-------- 856
Query: 713 LKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKLDSLLKRV 772
+D E L R + GE + + R L++E+E ++E+ + +L +
Sbjct: 857 -QDREQKQLLARDTQRQESDKNGESASPERD-RESLKVEIETSEEIQEKQVQKQTLPSKA 914
Query: 773 RSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSGQPFHSTG 832
+ R V + + + + +E+ T + + + GQ T
Sbjct: 915 FERE-----VERPVANRECDPAELEEKVPKVILERDTQRG--EPEGGSQDQKGQASSPTP 967
Query: 833 APGDAKSEVV-PLSGMMVRHAQS----SPVVIQPSQHSVALLN----PAQNLPHVASSPA 883
PG ++ P S + +QS SPV P +H LLN PA+ + ++
Sbjct: 968 EPGVGAGDLPGPTSAPVPSGSQSGGRGSPV--SPRRHQKGLLNCKMPPAEKASRIRAAEK 1025
Query: 884 VPQ------EATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKW 937
V + +A + +AP PQ P+N + + L + S + ++ K +
Sbjct: 1026 VSRGDQESPDACLPPTVPEAPAPPQKPLNSQSQKHLAPPPLLSPLLPSIKPTVRKTRQDG 1085
Query: 938 EEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPN 997
++ E E + + KS + PAT P + P
Sbjct: 1086 SQEAPEAPL--SSELEPFHPKPKIRTRKS-SRMTPFPATSAAPEPHPSTSTAQPVTPKPT 1142
Query: 998 SEQDLEKLGGKSPPPPPP--PPRRSYLPGSGL---TTTRSGDVVYTGRKENITAKASSED 1052
S+ + S P P P P + T+ V GRK + K + E
Sbjct: 1143 SQATRSRTNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTSQVTRGRKSRSSVK-TPET 1201
Query: 1053 AGPS-----PQTRATKYPAEEPASAWT----------------PSPPPVTTSSSKDEEEE 1091
P+ P T + EP S T P+ P + S+S D+
Sbjct: 1202 VVPTALELQPSTSTDRPVTSEPTSQATRGRKNRSSVKTPEPVVPTAPELQPSTSTDQPVT 1261
Query: 1092 EEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKK 1151
E + + S +T VP + + RP T K + N S+ K
Sbjct: 1262 SEPTYQATRGRKNRSSV-KTPEPVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVK 1320
Query: 1152 SGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTG 1211
+ PT+P L S + +S S + S++ NP +T P P S T
Sbjct: 1321 TPETVVPTAPELQISTSTDQPVTPKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTE 1380
Query: 1212 PPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAP--PPLSFSSSPPSPASS 1269
P + P ++ + + + +GK +P++ AP P + + P +P +
Sbjct: 1381 QP-----VTPEPTSRATRGRKNRSSGK------TPETLVPTAPKLEPSTSTDQPVTPEPT 1429
Query: 1270 VSLNQGAKGTRTIHTPSLTSYKAQNGSSSKAT--PSTAKETS 1309
+G ++ TP A S +T P T + TS
Sbjct: 1430 SQATRGRTNRSSVKTPETVVPTAPELQPSTSTDQPVTPEPTS 1471
Score = 42.4 bits (98), Expect = 0.003
Identities = 49/249 (19%), Positives = 93/249 (37%), Gaps = 14/249 (5%)
Query: 973 PPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRS 1032
P T RG V+ E + +L+ P P R+ ++ ++
Sbjct: 1467 PEPTSQATRGRTDRSSVKTPETVVPTAPELQASASTDQPVTSEPTSRTTRGRKNRSSVKT 1526
Query: 1033 GDVVYTGRKENITAKASSEDAGPSPQTRATK----YPAEEPASAWTPSPPPVTTSSSKDE 1088
+ V E + ++ + P P +RAT+ + + + P P + S+S+++
Sbjct: 1527 PETVVPAAPELQPSTSTDQPVTPEPTSRATRGRTNRSSVKTPESIVPIAPELQPSTSRNQ 1586
Query: 1089 EEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGS 1148
E + + + + +T VP + + P T KL R+ N S
Sbjct: 1587 LVTPEPTSR-ATRCRTNRSSVKTPEPVVPTAPEPHPTTSTDQPVTPKLTSRATRRKTNRS 1645
Query: 1149 AKK-------SGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPA-TKPS 1200
+ K + D +P +P+ S P G+S +L SS+ + +P P P
Sbjct: 1646 SVKTPKPVEPAASDLEPFTPT-DQSVTPEAIAQGGQSKTLRSSTVRAMPVPTTPEFQSPV 1704
Query: 1201 IASNPLSPQ 1209
P+SP+
Sbjct: 1705 TTDQPISPE 1713
Score = 39.7 bits (91), Expect = 0.019
Identities = 81/427 (18%), Positives = 148/427 (34%), Gaps = 35/427 (8%)
Query: 876 PHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEE--------IHSVSAKNRA 927
P V ++P + Q +TST Q + + Q+ + S+ E + ++ +R
Sbjct: 1160 PVVPTAPEL-QPSTSTDQPVTSEPTSQVTRGRKSRSSVKTPETVVPTALELQPSTSTDRP 1218
Query: 928 VSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVD 987
V+ E + ++ + E Q + P P T RG
Sbjct: 1219 VTSEPTSQATRGRKNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEP--TYQATRGRKNRS 1276
Query: 988 KVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAK 1047
V+ E + +L P P P R+ + +++ ++ + V E +
Sbjct: 1277 SVKTPEPVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETVVPTAPELQIST 1336
Query: 1048 ASSEDAGPSPQTRATKY-----PAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAEL 1102
++ + P P +R T+ + P S P P + S+S ++ E +
Sbjct: 1337 STDQPVTPKPTSRTTRSRTNMSSVKNPEST-VPIAPELPPSTSTEQPVTPEPTSRATRGR 1395
Query: 1103 QGSSGAPQTSRMPVPMSAKNRPGT-LDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSP 1161
+ S +T VP + K P T D+P + R N S+ K+ PT+P
Sbjct: 1396 KNRSSG-KTPETLVPTAPKLEPSTSTDQPVTPEPTSQATRGR-TNRSSVKTPETVVPTAP 1453
Query: 1162 SLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIP 1221
L S + +S D S++ P P+ S T P S
Sbjct: 1454 ELQPSTSTDQPVTPEPTSQATRGRTDRSSVKTPETVVPTAPELQASASTDQPVTSEP--- 1510
Query: 1222 SVSNGSLKFQSLTHTGKGHHLSF-SPQSQNGRAP--PPLSFSSSPPSPASSVSLNQGAKG 1278
S T G+ + S +P++ AP P + + P +P + +G
Sbjct: 1511 ---------TSRTTRGRKNRSSVKTPETVVPAAPELQPSTSTDQPVTPEPTSRATRGRTN 1561
Query: 1279 TRTIHTP 1285
++ TP
Sbjct: 1562 RSSVKTP 1568
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens]
Length = 816
Score = 55.8 bits (133), Expect = 3e-07
Identities = 72/307 (23%), Positives = 106/307 (34%), Gaps = 57/307 (18%)
Query: 1006 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTG------------------RKENITAK 1047
G ++PP P PG TTR G + G ++ ++A
Sbjct: 91 GERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAG 150
Query: 1048 ASSEDAGPSPQTRATKYPAEEPASAWTPS-PPPVTTSSSKDEEEEEEEGDKIMAELQGSS 1106
A + +GP+P T + A+ P P ++ + E + +E +
Sbjct: 151 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTE 210
Query: 1107 GAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDP-RQYRQANGSAKKSGGDFKPTSPSLPA 1165
+P R P RP + + L P R A G+ + +P L A
Sbjct: 211 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 270
Query: 1166 SK-----------IPALSPSSGKSSSLPSSSGDSS--------NLPNPPATKPSIASNPL 1206
+ PAL P S + PS S S LP+PPAT PS A+ L
Sbjct: 271 LRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSL 330
Query: 1207 SPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSP 1266
T H S +PS L + PQ+ A PPL +PPSP
Sbjct: 331 GSPTLQATH--SFLPSPPLSPL-------------ATPPPQAPPALALPPL---QAPPSP 372
Query: 1267 ASSVSLN 1273
+S L+
Sbjct: 373 PASPPLS 379
Score = 47.0 bits (110), Expect = 1e-04
Identities = 77/347 (22%), Positives = 110/347 (31%), Gaps = 56/347 (16%)
Query: 955 LLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPP 1014
L A ++ S L P +GP RG P S+ P Q L PP
Sbjct: 225 LQRPASRSLSSSATPLSSPARSGPSARG-TPRAPAHPSQPKPKGLQALR-------PPQV 276
Query: 1015 PPPRRSYLPGSG------LTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEE 1068
PPR+ P G L T ++ S PS T + P +
Sbjct: 277 TPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQ 336
Query: 1069 PASAWTPSPP--PVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRM-PVPMSAKNRPG 1125
++ PSPP P+ T + + LQ P + + P+ + P
Sbjct: 337 ATHSFLPSPPLSPLATPPPQAPPA------LALPPLQAPPSPPASPPLSPLATPSPQAPN 390
Query: 1126 TL------------DKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSP 1173
L P Q+ P + + S +P L P SP
Sbjct: 391 ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASP 450
Query: 1174 SSGKSSSLPSSSGDSSNLPN------PPATKPSIASNPLSPQTGPPAHSASLIPSVSNGS 1227
S++ P + P PP P++A+ PL PPA P + S
Sbjct: 451 PMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 510
Query: 1228 LKFQSLTHTGKGHHLSFSPQSQNGRAPPPLS--FSSSPPSPASSVSL 1272
L L +P Q APP L+ PPSP +S +L
Sbjct: 511 LPMSPLA----------TPPPQ---APPVLAAPLLQVPPSPPASPTL 544
Score = 43.5 bits (101), Expect = 0.001
Identities = 74/318 (23%), Positives = 106/318 (33%), Gaps = 58/318 (18%)
Query: 1007 GKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA 1066
G PPPP P + G+ R G T S+ AGP+ +R
Sbjct: 31 GSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSR------ 84
Query: 1067 EEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGT 1126
PAS PP +S P P S RPG
Sbjct: 85 -PPASGRGERAPPAKNTS------------------------PGPVSSPGRASGTTRPGP 119
Query: 1127 LDKPGKQSKLQDPRQYRQANGSAKK---SGGDFKPTSPSLPASKIPAL---SPSSGKSSS 1180
L + G + ++ +A + K+ S G + TS P + PA+ S ++G
Sbjct: 120 LGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVG 179
Query: 1181 LPSSSGDSSNLPNPPATKP-SIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKG 1239
LP + S P PP P S+ T P+ +A PS G + S + +
Sbjct: 180 LPRPA--PSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 237
Query: 1240 HHLSFSPQS-QNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQN---- 1294
LS +S + R P S P P KG + + P +T +
Sbjct: 238 TPLSSPARSGPSARGTPRAPAHPSQPKP----------KGLQALRPPQVTPPRKDAAPAL 287
Query: 1295 ---GSSSKATPSTAKETS 1309
SS ATPS + S
Sbjct: 288 GPLSSSPLATPSPSAPPS 305
Score = 34.7 bits (78), Expect = 0.62
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 13/84 (15%)
Query: 295 PGAPRPGSTAHPPHAIPNSPPSTP--VPHSMPPSPSRIPYGGTRSMVV-------PGNAT 345
P + P S A PP +P SPP++P P + PP + P + P AT
Sbjct: 427 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALAT 486
Query: 346 IPRDRISSLPVS----RPISPSPS 365
P + S P S P SPS S
Sbjct: 487 PPLQALPSPPASFPGQAPFSPSAS 510
Score = 33.5 bits (75), Expect = 1.4
Identities = 28/83 (33%), Positives = 31/83 (37%), Gaps = 14/83 (16%)
Query: 295 PGAPRPGSTAHPPHAIPNS------------PPSTPV--PHSMPPSPSRIPYGGTRSMVV 340
P +P A P PN+ PPS PV P S P SP P S
Sbjct: 373 PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP 432
Query: 341 PGNATIPRDRISSLPVSRPISPS 363
P A P S P S P+SPS
Sbjct: 433 PSLAAPPLQVPPSPPASPPMSPS 455
Score = 33.1 bits (74), Expect = 1.8
Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 17/127 (13%)
Query: 960 QANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRR 1019
QA + + P L++PP+ P AP P++ +L P PPPPP R
Sbjct: 522 QAPPVLAAPLLQVPPSPPASPTLQAPRRP---PTPGPDTSVSGPRLTLALAPGPPPPPSR 578
Query: 1020 SYLPGSGLTTTRSGDVVYTGRKENITA---KASSEDAGPSPQTRATKYPAEEPA----SA 1072
S P S T SG + G + T+ + D+GP A+ P E A +A
Sbjct: 579 S--PSS----TLSGPDL-AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAA 631
Query: 1073 WTPSPPP 1079
W+ P P
Sbjct: 632 WSRGPAP 638
Score = 31.6 bits (70), Expect = 5.2
Identities = 26/82 (31%), Positives = 29/82 (35%), Gaps = 15/82 (18%)
Query: 295 PGAPRPGSTAHPPHAIPNSPPSTP--------------VPHSMPPSPSRIPYGGTRSMVV 340
P AP P +A P SPP+TP HS PSP P
Sbjct: 300 PSAP-PSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAP 358
Query: 341 PGNATIPRDRISSLPVSRPISP 362
P A P S P S P+SP
Sbjct: 359 PALALPPLQAPPSPPASPPLSP 380
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 55.8 bits (133), Expect = 3e-07
Identities = 91/324 (28%), Positives = 126/324 (38%), Gaps = 55/324 (16%)
Query: 995 SPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITA---KASSE 1051
+P S+ + K PPPPPP S SG + G KE T + SE
Sbjct: 771 TPRSQSFALRARRKGPPPPPPKRLSSV---SGPSPEPPPLDESPGPKEGATGPRRRTLSE 827
Query: 1052 DAGPS-------PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1104
AGPS P A+ EEP P P + SS + EEG+ + +
Sbjct: 828 PAGPSEPPGPPAPAGPASDTEEEEPG----PEGTPPSRGSSGEGLPFAEEGNLTIKQRPK 883
Query: 1105 SSGAPQTSRMPVPM----------SAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGG 1154
+G P PVP + K RP ++ Q+ L A G A + G
Sbjct: 884 PAG-PPPRETPVPPGLDFNLTESDTVKRRPKCREREPLQTAL-------LAFGVASATPG 935
Query: 1155 DFKP-TSP----SLPASKIPALSPSSGKSSSLPSSSGDSSNL--PNPPATKPSIASNPLS 1207
P SP S PAS +P PSS + +P+ S + P PP P + S+ S
Sbjct: 936 PAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCPGPGLESSAAS 995
Query: 1208 ---PQTGPPAHSASLIPSVSNGSL-KFQSLTHTGKGHHLSFS-PQSQNGRAPPPLSFSSS 1262
+T PPA A+L+ G+ K S+ T L+FS P+ P P+
Sbjct: 996 RWNGETEPPAAPAALLKVPGAGTAPKPVSVACT----QLAFSGPKLAPRLGPRPV----P 1047
Query: 1263 PPSPASSVSLNQGAKGTRTIHTPS 1286
PP P S+ ++ G R T S
Sbjct: 1048 PPRPESTGTVGPGQAQQRLEQTSS 1071
Score = 37.0 bits (84), Expect = 0.12
Identities = 74/327 (22%), Positives = 110/327 (33%), Gaps = 46/327 (14%)
Query: 954 KLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPP 1013
+L + + ++ + N E P GP + + SE SP E GG P P
Sbjct: 556 RLAKGPELMAIEGLENGEGPATAGPR------LLTFQGSELSP--ELQAAMAGGGPEPLP 607
Query: 1014 PPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTR----ATKYPAEEP 1069
PP R G + SG +E + S D P PQ R T+ P +
Sbjct: 608 LPPARSPSQESIGARSRGSGH-----SQEQPAPQPSGGDPSP-PQERNLPEGTERPPKLC 661
Query: 1070 ASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDK 1129
+S PPP + G A S A + P P K R +L +
Sbjct: 662 SSLPGQGPPPYVFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSR 721
Query: 1130 PGKQSKLQDPRQYRQANGSAKKSGGDF-----KPTSPSLPASKIPALSPSSGKSSSLPSS 1184
PG + +A G + G + +P +L + P+++P+ + + S
Sbjct: 722 PGPTEGDAEG----EAEGPVGSTLGSYATLTRRPGRSALVRTS-PSVTPTPARGTPRSQS 776
Query: 1185 SGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF 1244
+ PP P S+ P PP S P G+ TG
Sbjct: 777 FALRARRKGPPPPPPKRLSSVSGPSPEPPPLDES--PGPKEGA--------TGPRRRTLS 826
Query: 1245 SPQSQNGRAPPPLSFSSSPPSPASSVS 1271
P G + PP PP+PA S
Sbjct: 827 EPA---GPSEPP-----GPPAPAGPAS 845
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 55.8 bits (133), Expect = 3e-07
Identities = 91/324 (28%), Positives = 126/324 (38%), Gaps = 55/324 (16%)
Query: 995 SPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITA---KASSE 1051
+P S+ + K PPPPPP S SG + G KE T + SE
Sbjct: 853 TPRSQSFALRARRKGPPPPPPKRLSSV---SGPSPEPPPLDESPGPKEGATGPRRRTLSE 909
Query: 1052 DAGPS-------PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1104
AGPS P A+ EEP P P + SS + EEG+ + +
Sbjct: 910 PAGPSEPPGPPAPAGPASDTEEEEPG----PEGTPPSRGSSGEGLPFAEEGNLTIKQRPK 965
Query: 1105 SSGAPQTSRMPVPM----------SAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGG 1154
+G P PVP + K RP ++ Q+ L A G A + G
Sbjct: 966 PAG-PPPRETPVPPGLDFNLTESDTVKRRPKCREREPLQTAL-------LAFGVASATPG 1017
Query: 1155 DFKP-TSP----SLPASKIPALSPSSGKSSSLPSSSGDSSNL--PNPPATKPSIASNPLS 1207
P SP S PAS +P PSS + +P+ S + P PP P + S+ S
Sbjct: 1018 PAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCPGPGLESSAAS 1077
Query: 1208 ---PQTGPPAHSASLIPSVSNGSL-KFQSLTHTGKGHHLSFS-PQSQNGRAPPPLSFSSS 1262
+T PPA A+L+ G+ K S+ T L+FS P+ P P+
Sbjct: 1078 RWNGETEPPAAPAALLKVPGAGTAPKPVSVACT----QLAFSGPKLAPRLGPRPV----P 1129
Query: 1263 PPSPASSVSLNQGAKGTRTIHTPS 1286
PP P S+ ++ G R T S
Sbjct: 1130 PPRPESTGTVGPGQAQQRLEQTSS 1153
Score = 37.0 bits (84), Expect = 0.12
Identities = 74/327 (22%), Positives = 110/327 (33%), Gaps = 46/327 (14%)
Query: 954 KLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPP 1013
+L + + ++ + N E P GP + + SE SP E GG P P
Sbjct: 638 RLAKGPELMAIEGLENGEGPATAGPR------LLTFQGSELSP--ELQAAMAGGGPEPLP 689
Query: 1014 PPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTR----ATKYPAEEP 1069
PP R G + SG +E + S D P PQ R T+ P +
Sbjct: 690 LPPARSPSQESIGARSRGSGH-----SQEQPAPQPSGGDPSP-PQERNLPEGTERPPKLC 743
Query: 1070 ASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDK 1129
+S PPP + G A S A + P P K R +L +
Sbjct: 744 SSLPGQGPPPYVFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSR 803
Query: 1130 PGKQSKLQDPRQYRQANGSAKKSGGDF-----KPTSPSLPASKIPALSPSSGKSSSLPSS 1184
PG + +A G + G + +P +L + P+++P+ + + S
Sbjct: 804 PGPTEGDAEG----EAEGPVGSTLGSYATLTRRPGRSALVRTS-PSVTPTPARGTPRSQS 858
Query: 1185 SGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF 1244
+ PP P S+ P PP S P G+ TG
Sbjct: 859 FALRARRKGPPPPPPKRLSSVSGPSPEPPPLDES--PGPKEGA--------TGPRRRTLS 908
Query: 1245 SPQSQNGRAPPPLSFSSSPPSPASSVS 1271
P G + PP PP+PA S
Sbjct: 909 EPA---GPSEPP-----GPPAPAGPAS 927
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 55.5 bits (132), Expect = 3e-07
Identities = 82/321 (25%), Positives = 119/321 (37%), Gaps = 58/321 (18%)
Query: 972 MPPATGP--LPRGDAPVDKVELSEDS------PNSEQDLEKLGGKSP----PPPPPPPRR 1019
+PP G +P G P + +E S P+S LE+ G SP PP P P
Sbjct: 527 LPPTDGSTVVPAGPEPPPQSSRAESSSGGGTVPSSAGILEQ--GPSPGDGSPPKPKDPVS 584
Query: 1020 SYLPGSGLTTTRSGDVVYTGRKENITAKASSE--------DAGPSPQT--RATKYPAEEP 1069
+ +P G R+ + +G+ + A S + AGPSP T RA K PA P
Sbjct: 585 AAVPAPG----RNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAP 640
Query: 1070 ASAWTPSP-PPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLD 1128
P P P SSS + K P S P PG
Sbjct: 641 PKPGNPPPGHPGGQSSSGTSQHPPSLSPK----------PPTRSPSPPTQHTGQPPG--- 687
Query: 1129 KPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSS---GKSSSLPSSS 1185
+P S+L PR+Y ++ + + P P A+ + P+S +LPS
Sbjct: 688 QPSAPSQLSAPRRY--SSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEH 745
Query: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
G L P T P + P +P G S +++ G+ + + H G
Sbjct: 746 G----LEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPE-TAQPHAGTLPRPRPV 800
Query: 1246 PQSQNGRAPPPLSFSSSPPSP 1266
P+ +N + PP PP P
Sbjct: 801 PKPRNRPSVPP------PPQP 815
Score = 41.6 bits (96), Expect = 0.005
Identities = 63/293 (21%), Positives = 94/293 (32%), Gaps = 45/293 (15%)
Query: 1011 PPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPA 1070
PP PP + +P +S + + + A + GPSP + P ++P
Sbjct: 525 PPLPPTDGSTVVPAGPEPPPQSSRAESSSGGGTVPSSAGILEQGPSPGDGSPPKP-KDPV 583
Query: 1071 SAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKP 1130
SA P+P + + + + + Q S G P + P P + + + KP
Sbjct: 584 SAAVPAPGRNNSQIASGQNQPQAAA----GSHQLSMGQPHNAAGPSPHTLRR---AVKKP 636
Query: 1131 GKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSN 1190
P P P P SSG S PS S
Sbjct: 637 AP------------------------APPKPGNPPPGHPGGQSSSGTSQHPPSLS----- 667
Query: 1191 LPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQN 1250
P PP PS P + TG P S +S SL+ +H P +Q
Sbjct: 668 -PKPPTRSPS----PPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQ- 721
Query: 1251 GRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPS 1303
A P + + P + ++L + HTP T K PS
Sbjct: 722 --ATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGKQNPS 772
Score = 40.8 bits (94), Expect = 0.009
Identities = 61/235 (25%), Positives = 85/235 (36%), Gaps = 28/235 (11%)
Query: 1082 TSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPV-PMSAKNRPGTLDKPGKQSKLQDPR 1140
T + D E + MA ++G ++ + + A R GTL++ Q P
Sbjct: 468 TGNDSDSGTLERKRPASMAVMEGDLVKKESFGVKLMDFQAHRRGGTLNRKHISPAFQPPL 527
Query: 1141 QYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPS 1200
G P P P A S S G ++PSS+G P+P P
Sbjct: 528 P--------PTDGSTVVPAGPEPPPQSSRAESSSGG--GTVPSSAGILEQGPSPGDGSPP 577
Query: 1201 IASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF-SPQSQNGRAPPPLSF 1259
+P+S P + S I S N Q G H LS P + G +P L
Sbjct: 578 KPKDPVSAAVPAPGRNNSQIASGQN-----QPQAAAG-SHQLSMGQPHNAAGPSPHTLRR 631
Query: 1260 SSSPPSPASSVSLN--------QGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAK 1306
+ P+PA N Q + GT + H PSL S K S S T T +
Sbjct: 632 AVKKPAPAPPKPGNPPPGHPGGQSSSGT-SQHPPSL-SPKPPTRSPSPPTQHTGQ 684
Score = 40.4 bits (93), Expect = 0.011
Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 13/109 (11%)
Query: 266 PAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGS--TAHPPHAIPNSPPSTPVPHSM 323
P A NH P L++ + + G P P + + H ++PP TP P S
Sbjct: 707 PIQAPNHPPPQ---PPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPST 763
Query: 324 PPSPSRIP--------YGGTRSMVVPGNATIPRDRISSLPVSRPISPSP 364
PP + P GG P T+PR R P +RP P P
Sbjct: 764 PPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 812
Score = 31.2 bits (69), Expect = 6.8
Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 22/110 (20%)
Query: 266 PAHAFNHTPKTMNGDMRMQRELVYARGDGP-----GAPRPGSTAHPPHAIPNSP---PST 317
P +A +P T+ ++ G+ P G G++ HPP P P PS
Sbjct: 618 PHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSP 677
Query: 318 PVPHS--MPPSPSRIPYGGTRSMVVPGNATIPRDRISSL-PVSRPISPSP 364
P H+ P PS P + PR SSL P+ P P P
Sbjct: 678 PTQHTGQPPGQPS-----------APSQLSAPRRYSSSLSPIQAPNHPPP 716
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 55.1 bits (131), Expect = 4e-07
Identities = 80/325 (24%), Positives = 118/325 (36%), Gaps = 46/325 (14%)
Query: 957 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLE-KLGGKSPPPPPP 1015
EE + N+ ++ L P + G+ D L P S +E L K PP P
Sbjct: 444 EEVEFNVSEAFVPLTTPSSNHSFHTGNDS-DSGTLERKRPASMAVMEGDLVKKESPPKPK 502
Query: 1016 PPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSE--------DAGPSPQT--RATKYP 1065
P + +P G R+ + +G+ + A S + AGPSP T RA K P
Sbjct: 503 DPVSAAVPAPG----RNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKP 558
Query: 1066 AEEPASAWTPSP-PPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRP 1124
A P P P P SSS + K P S P P
Sbjct: 559 APAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPK----------PPTRSPSPPTQHTGQPP 608
Query: 1125 GTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSS---GKSSSL 1181
G +P S+L PR+Y ++ + + P P A+ + P+S +L
Sbjct: 609 G---QPSAPSQLSAPRRY--SSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMAL 663
Query: 1182 PSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHH 1241
PS G L P T P + P +P G S +++ G+ + + H G
Sbjct: 664 PSEHG----LEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPE-TAQPHAGTLPR 718
Query: 1242 LSFSPQSQNGRAPPPLSFSSSPPSP 1266
P+ +N + PP PP P
Sbjct: 719 PRPVPKPRNRPSVPP------PPQP 737
Score = 40.4 bits (93), Expect = 0.011
Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 13/109 (11%)
Query: 266 PAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGS--TAHPPHAIPNSPPSTPVPHSM 323
P A NH P L++ + + G P P + + H ++PP TP P S
Sbjct: 629 PIQAPNHPPPQ---PPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPST 685
Query: 324 PPSPSRIP--------YGGTRSMVVPGNATIPRDRISSLPVSRPISPSP 364
PP + P GG P T+PR R P +RP P P
Sbjct: 686 PPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 734
Score = 32.3 bits (72), Expect = 3.1
Identities = 47/217 (21%), Positives = 75/217 (34%), Gaps = 18/217 (8%)
Query: 1094 EGDKIMAELQGSSGAPQTSRMPVP-------MSAKNRPGTLDKPGKQSKLQDPRQYRQAN 1146
EGD + E P ++ +P P S +N+P +L + + A
Sbjct: 489 EGDLVKKESPPKPKDPVSAAVPAPGRNNSQIASGQNQP---QAAAGSHQLSMGQPHNAAG 545
Query: 1147 GSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPL 1206
S K +P+ P P G+SSS G S + P+ P+ + +P
Sbjct: 546 PSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSS-----GTSQHPPSLSPKPPTRSPSPP 600
Query: 1207 SPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSP 1266
+ TG P S +S SL+ +H P +Q A P + + P
Sbjct: 601 TQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQ---ATPLMHTKPNSQGP 657
Query: 1267 ASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPS 1303
+ ++L + HTP T K PS
Sbjct: 658 PNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGKQNPS 694
Score = 31.2 bits (69), Expect = 6.8
Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 22/110 (20%)
Query: 266 PAHAFNHTPKTMNGDMRMQRELVYARGDGP-----GAPRPGSTAHPPHAIPNSP---PST 317
P +A +P T+ ++ G+ P G G++ HPP P P PS
Sbjct: 540 PHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSP 599
Query: 318 PVPHS--MPPSPSRIPYGGTRSMVVPGNATIPRDRISSL-PVSRPISPSP 364
P H+ P PS P + PR SSL P+ P P P
Sbjct: 600 PTQHTGQPPGQPS-----------APSQLSAPRRYSSSLSPIQAPNHPPP 638
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.125 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,334,609
Number of Sequences: 37866
Number of extensions: 3538307
Number of successful extensions: 39333
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 1839
Number of HSP's that attempted gapping in prelim test: 23670
Number of HSP's gapped (non-prelim): 13429
length of query: 1309
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1195
effective length of database: 13,930,794
effective search space: 16647298830
effective search space used: 16647298830
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.