Guide to the Human Genome
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Name: PRKACB Sequence: fasta or formatted (351aa) NCBI GI: 4506057
Description:

cAMP-dependent protein kinase catalytic subunit beta isoform 2

Referenced in:

Cyclic Nucleotides

Other entries for this name:
alt prot [398aa] cAMP-dependent protein kinase catalytic subunit beta isoform 1
alt prot [257aa] cAMP-dependent protein kinase catalytic subunit beta isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         24           2
 C cysteine            0.6          2           1
 D aspartate           5.4         19           2
 E glutamate           7.7         27           3
 F phenylalanine       6.8         24           2
 G glycine             6.3         22           2
 H histidine           2.3          8           1
 I isoleucine          5.7         20           2
 K lysine              9.7         34           2
 L leucine             9.1         32           2
 M methionine          2.0          7           1
 N asparagine          4.0         14           2
 P proline             3.7         13           2
 Q glutamine           3.4         12           1
 R arginine            4.8         17           2
 S serine              4.6         16           2
 T threonine           4.8         17           2
 V valine              6.0         21           2
 W tryptophan          1.7          6           2
 Y tyrosine            4.6         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP-dependent protein kinase catalytic subunit beta ... 
PRKACB                0.959   cAMP-dependent protein kinase catalytic subunit beta...
PRKACA                0.929   cAMP-dependent protein kinase catalytic subunit alpha...
PRKACA                0.896   cAMP-dependent protein kinase catalytic subunit alph...
PRKACG                0.803   protein kinase, cAMP-dependent, catalytic, gamma [Ho...
PRKACB                0.715   cAMP-dependent protein kinase catalytic subunit beta...
PRKX                  0.505   protein kinase, X-linked 
PRKG1                 0.369   protein kinase, cGMP-dependent, type I isoform 1 [H...
PRKG1                 0.369   protein kinase, cGMP-dependent, type I isoform 2 [Ho...
PRKG2                 0.356   protein kinase, cGMP-dependent, type II 
SGK1                  0.353   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.353   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.353   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.353   serum/glucocorticoid regulated kinase 1 isoform 2 [...
AKT2                  0.352   AKT2 kinase 
AKT3                  0.352   AKT3 kinase isoform 2 
AKT3                  0.346   AKT3 kinase isoform 1 
AKT1                  0.346   AKT1 kinase 
AKT1                  0.346   AKT1 kinase 
AKT1                  0.346   AKT1 kinase 
SGK2                  0.346   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.346   serum/glucocorticoid regulated kinase 2 isoform beta...
PKN2                  0.331   protein kinase N2 
PRKCB                 0.326   protein kinase C, beta isoform 1 
SGK3                  0.318   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.318   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
PRKCH                 0.318   protein kinase C, eta 
PRKCA                 0.317   protein kinase C, alpha 
PRKCE                 0.313   protein kinase C, epsilon 
RPS6KA4               0.310   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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