Guide to the Human Genome
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Name: MGAT3 Sequence: fasta or formatted (533aa) NCBI GI: 148539890
Description:

mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase

Referenced in:

Protein Glycosylation

Other entries for this name:
alt mRNA [533aa] mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltr...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         27           2
 C cysteine            1.9         10           1
 D aspartate           5.6         30           2
 E glutamate           6.0         32           2
 F phenylalanine       6.0         32           2
 G glycine             8.3         44           2
 H histidine           2.8         15           1
 I isoleucine          2.4         13           2
 K lysine              3.8         20           1
 L leucine            10.1         54           2
 M methionine          1.9         10           1
 N asparagine          3.2         17           2
 P proline             9.0         48           3
 Q glutamine           2.6         14           2
 R arginine            8.8         47           3
 S serine              4.7         25           2
 T threonine           4.7         25           2
 V valine              6.2         33           2
 W tryptophan          2.3         12           1
 Y tyrosine            4.7         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetyl... 
MGAT3                 1.000   mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetyl...
WAS                   0.008   Wiskott-Aldrich syndrome protein 
RLTPR                 0.008   RGD motif, leucine rich repeats, tropomodulin domain...
ATXN7L2               0.007   ataxin 7-like 2 
EGR1                  0.007   early growth response 1 
ITGB4                 0.007   integrin beta 4 isoform 2 precursor 
ITGB4                 0.007   integrin beta 4 isoform 1 precursor 
ITGB4                 0.007   integrin beta 4 isoform 3 precursor 
TNC                   0.007   tenascin C precursor 
ANKRD40               0.007   ankyrin repeat domain 40 
ODZ1                  0.006   odz, odd Oz/ten-m homolog 1 isoform 3 
ODZ1                  0.006   odz, odd Oz/ten-m homolog 1 isoform 2 
ODZ1                  0.006   odz, odd Oz/ten-m homolog 1 isoform 1 
LOC100131540          0.006   PREDICTED: hypothetical protein 
LOC100131540          0.006   PREDICTED: hypothetical protein 
LOC100131540          0.006   PREDICTED: hypothetical protein 
CABP1                 0.006   calcium binding protein 1 isoform 3 
TNXB                  0.006   tenascin XB isoform 1 precursor 
TTLL11                0.006   tubulin tyrosine ligase-like family, member 11 a [H...
TTLL11                0.006   tubulin tyrosine ligase-like family, member 11 b [Ho...
ZNF628                0.006   zinc finger protein 628 
PLEKHA4               0.006   pleckstrin homology domain containing family A memb...
LOC100129129          0.006   PREDICTED: hypothetical protein 
DUSP8                 0.006   dual specificity phosphatase 8 
FLJ46321              0.005   hypothetical protein LOC389763 
RELN                  0.005   reelin isoform b 
RELN                  0.005   reelin isoform a 
CELSR3                0.005   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
GLTSCR1               0.005   glioma tumor suppressor candidate region gene 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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