Guide to the Human Genome
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Name: ZNF655 Sequence: fasta or formatted (110aa) NCBI GI: 145701017
Description:

zinc finger protein 655 isoform c

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [181aa] zinc finger protein 655 isoform b
alt prot [526aa] zinc finger protein 655 isoform f
alt prot [181aa] zinc finger protein 655 isoform b
alt prot [526aa] zinc finger protein 655 isoform f
alt prot [491aa] zinc finger protein 655 isoform a
alt mRNA [110aa] zinc finger protein 655 isoform c
alt prot [491aa] zinc finger protein 655 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2          9           2
 C cysteine            2.7          3           1
 D aspartate           2.7          3           1
 E glutamate           8.2          9           2
 F phenylalanine       3.6          4           1
 G glycine             5.5          6           2
 H histidine           1.8          2           1
 I isoleucine          5.5          6           1
 K lysine              1.8          2           1
 L leucine            10.0         11           2
 M methionine          1.8          2           1
 N asparagine          0.9          1           1
 P proline            10.0         11           1
 Q glutamine           7.3          8           1
 R arginine            6.4          7           1
 S serine             10.0         11           1
 T threonine           8.2          9           2
 V valine              3.6          4           1
 W tryptophan          0.9          1           1
 Y tyrosine            0.9          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 655 isoform c 
ZNF655                1.000   zinc finger protein 655 isoform c 
ZNF655                0.553   zinc finger protein 655 isoform b 
ZNF655                0.553   zinc finger protein 655 isoform b 
ZNF655                0.362   zinc finger protein 655 isoform f 
ZNF655                0.362   zinc finger protein 655 isoform f 
ZNF655                0.347   zinc finger protein 655 isoform a 
ZNF655                0.347   zinc finger protein 655 isoform a 
SCAND3                0.045   SCAN domain containing 3 
MED14                 0.020   mediator complex subunit 14 
CNGB1                 0.020   cyclic nucleotide gated channel beta 1 isoform b [H...
CNGB1                 0.020   cyclic nucleotide gated channel beta 1 isoform a [H...
ANPEP                 0.015   membrane alanine aminopeptidase precursor 
TINAGL1               0.015   tubulointerstitial nephritis antigen-like 1 
C17orf53              0.010   hypothetical protein LOC78995 
RPUSD1                0.010   RNA pseudouridylate synthase domain containing 1 [Ho...
FN1                   0.010   fibronectin 1 isoform 3 preproprotein 
FN1                   0.010   fibronectin 1 isoform 1 preproprotein 
FN1                   0.010   fibronectin 1 isoform 4 preproprotein 
FN1                   0.010   fibronectin 1 isoform 2 preproprotein 
MLH3                  0.010   mutL homolog 3 isoform 1 
MLH3                  0.010   mutL homolog 3 isoform 2 
LOC100287541          0.005   PREDICTED: hypothetical protein XP_002344230 
LOC729815             0.005   PREDICTED: hypothetical protein 
TBC1D10B              0.005   TBC1 domain family, member 10B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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