PCDHGC5 3986

Name: PCDHGC5	Sequence: fasta or formatted (878aa)		NCBI GI: 14277685
Description: protocadherin gamma subfamily C, 5 isoform 2 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [944aa] protocadherin gamma subfamily C, 5 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 62 2 C cysteine 1.4 12 2 D aspartate 7.1 62 2 E glutamate 5.2 46 2 F phenylalanine 3.1 27 1 G glycine 7.1 62 4 H histidine 2.4 21 1 I isoleucine 3.0 26 2 K lysine 1.7 15 1 L leucine 12.5 110 3 M methionine 1.0 9 1 N asparagine 4.2 37 1 P proline 7.2 63 2 Q glutamine 4.4 39 2 R arginine 6.3 55 2 S serine 10.1 89 2 T threonine 6.2 54 2 V valine 7.5 66 3 W tryptophan 0.7 6 1 Y tyrosine 1.9 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin gamma subfamily C, 5 isoform 2 precurs... PCDHGC5 0.933 protocadherin gamma subfamily C, 5 isoform 1 precurs... PCDHGC4 0.379 protocadherin gamma subfamily C, 4 isoform 2 precurs... PCDHGC4 0.379 protocadherin gamma subfamily C, 4 isoform 1 precurs... PCDHAC2 0.370 protocadherin alpha subfamily C, 2 isoform 1 precurso... PCDHAC2 0.370 protocadherin alpha subfamily C, 2 isoform 2 precurs... PCDH10 0.350 protocadherin 10 isoform 1 precursor PCDH10 0.350 protocadherin 10 isoform 2 precursor PCDHGA11 0.340 protocadherin gamma subfamily A, 11 isoform 2 precur... PCDHGA11 0.340 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA5 0.339 protocadherin gamma subfamily A, 5 isoform 2 precurs... PCDHGA5 0.339 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA4 0.338 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA4 0.338 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHB7 0.338 protocadherin beta 7 precursor PCDHGA3 0.336 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA3 0.336 protocadherin gamma subfamily A, 3 isoform 2 precurs... PCDHGA9 0.333 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA9 0.333 protocadherin gamma subfamily A, 9 isoform 2 precurs... PCDHA3 0.333 protocadherin alpha 3 isoform 1 precursor PCDHA3 0.333 protocadherin alpha 3 isoform 2 precursor PCDHGB1 0.333 protocadherin gamma subfamily B, 1 isoform 2 precurs... PCDHGB1 0.333 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDHGA2 0.332 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA2 0.332 protocadherin gamma subfamily A, 2 isoform 2 precurs... PCDHGA12 0.330 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.330 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGA6 0.330 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA6 0.330 protocadherin gamma subfamily A, 6 isoform 2 precurs... PCDHGA8 0.330 protocadherin gamma subfamily A, 8 isoform 1 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.