PCDHA12 3818

Name: PCDHA12	Sequence: fasta or formatted (792aa)		NCBI GI: 14165392
Description: protocadherin alpha 12 isoform 2 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [941aa] protocadherin alpha 12 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 68 2 C cysteine 1.4 11 1 D aspartate 5.9 47 1 E glutamate 6.7 53 2 F phenylalanine 2.3 18 1 G glycine 6.1 48 2 H histidine 2.1 17 1 I isoleucine 4.4 35 2 K lysine 3.5 28 2 L leucine 11.7 93 4 M methionine 1.0 8 1 N asparagine 4.4 35 2 P proline 6.1 48 2 Q glutamine 3.4 27 2 R arginine 4.4 35 2 S serine 9.3 74 2 T threonine 3.8 30 2 V valine 11.4 90 2 W tryptophan 0.6 5 1 Y tyrosine 2.8 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 12 isoform 2 precursor PCDHA12 0.996 protocadherin alpha 12 isoform 1 precursor PCDHA10 0.772 protocadherin alpha 10 isoform 2 precursor PCDHA10 0.772 protocadherin alpha 10 isoform 1 precursor PCDHA11 0.767 protocadherin alpha 11 isoform 2 precursor PCDHA11 0.766 protocadherin alpha 11 isoform 1 precursor PCDHA8 0.765 protocadherin alpha 8 isoform 2 precursor PCDHA8 0.765 protocadherin alpha 8 isoform 1 precursor PCDHA13 0.763 protocadherin alpha 13 isoform 2 precursor PCDHA13 0.763 protocadherin alpha 13 isoform 1 precursor PCDHA6 0.759 protocadherin alpha 6 isoform 2 precursor PCDHA6 0.759 protocadherin alpha 6 isoform 1 precursor PCDHA4 0.757 protocadherin alpha 4 isoform 2 precursor PCDHA4 0.757 protocadherin alpha 4 isoform 1 precursor PCDHA2 0.755 protocadherin alpha 2 isoform 2 precursor PCDHA2 0.755 protocadherin alpha 2 isoform 1 precursor PCDHA3 0.750 protocadherin alpha 3 isoform 1 precursor PCDHA3 0.750 protocadherin alpha 3 isoform 2 precursor PCDHA7 0.750 protocadherin alpha 7 isoform 1 precursor PCDHA7 0.749 protocadherin alpha 7 isoform 2 precursor PCDHA1 0.745 protocadherin alpha 1 isoform 2 precursor PCDHA1 0.745 protocadherin alpha 1 isoform 1 precursor PCDHA5 0.742 protocadherin alpha 5 isoform 1 precursor PCDHA5 0.742 protocadherin alpha 5 isoform 2 precursor PCDHA9 0.738 protocadherin alpha 9 isoform 2 precursor PCDHA9 0.738 protocadherin alpha 9 isoform 1 precursor PCDHA10 0.512 protocadherin alpha 10 isoform 3 precursor PCDHA6 0.489 protocadherin alpha 6 isoform 3 precursor PCDHA1 0.481 protocadherin alpha 1 isoform 3 precursor PCDHGA12 0.363 protocadherin gamma subfamily A, 12 isoform 1 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.