PCDHA12 37314

Name: PCDHA12	Sequence: fasta or formatted (941aa)		NCBI GI: 9256578
Description: protocadherin alpha 12 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [792aa] protocadherin alpha 12 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 76 2 C cysteine 1.2 11 1 D aspartate 5.7 54 1 E glutamate 6.8 64 2 F phenylalanine 2.3 22 1 G glycine 6.8 64 2 H histidine 2.0 19 1 I isoleucine 4.6 43 2 K lysine 4.9 46 8 L leucine 10.3 97 4 M methionine 1.0 9 1 N asparagine 4.6 43 2 P proline 6.9 65 2 Q glutamine 3.7 35 2 R arginine 4.3 40 2 S serine 9.5 89 2 T threonine 4.1 39 2 V valine 10.0 94 2 W tryptophan 0.9 8 1 Y tyrosine 2.4 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 12 isoform 1 precursor PCDHA12 0.829 protocadherin alpha 12 isoform 2 precursor PCDHA10 0.809 protocadherin alpha 10 isoform 1 precursor PCDHA11 0.807 protocadherin alpha 11 isoform 1 precursor PCDHA8 0.804 protocadherin alpha 8 isoform 1 precursor PCDHA13 0.803 protocadherin alpha 13 isoform 1 precursor PCDHA4 0.799 protocadherin alpha 4 isoform 1 precursor PCDHA6 0.797 protocadherin alpha 6 isoform 1 precursor PCDHA2 0.795 protocadherin alpha 2 isoform 1 precursor PCDHA3 0.791 protocadherin alpha 3 isoform 1 precursor PCDHA7 0.791 protocadherin alpha 7 isoform 1 precursor PCDHA1 0.787 protocadherin alpha 1 isoform 1 precursor PCDHA5 0.785 protocadherin alpha 5 isoform 1 precursor PCDHA9 0.780 protocadherin alpha 9 isoform 1 precursor PCDHA10 0.643 protocadherin alpha 10 isoform 2 precursor PCDHA11 0.638 protocadherin alpha 11 isoform 2 precursor PCDHA8 0.636 protocadherin alpha 8 isoform 2 precursor PCDHA13 0.635 protocadherin alpha 13 isoform 2 precursor PCDHA6 0.631 protocadherin alpha 6 isoform 2 precursor PCDHA4 0.630 protocadherin alpha 4 isoform 2 precursor PCDHA2 0.628 protocadherin alpha 2 isoform 2 precursor PCDHA3 0.624 protocadherin alpha 3 isoform 2 precursor PCDHA7 0.623 protocadherin alpha 7 isoform 2 precursor PCDHA1 0.621 protocadherin alpha 1 isoform 2 precursor PCDHA5 0.617 protocadherin alpha 5 isoform 2 precursor PCDHA9 0.614 protocadherin alpha 9 isoform 2 precursor PCDHA10 0.426 protocadherin alpha 10 isoform 3 precursor PCDHA6 0.407 protocadherin alpha 6 isoform 3 precursor PCDHA1 0.400 protocadherin alpha 1 isoform 3 precursor PCDHGC5 0.316 protocadherin gamma subfamily C, 5 isoform 1 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.