Search of human proteins with 9966779

Search of human proteins with 9966779

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|9966779 eukaryotic translation initiation factor 2B, subunit
3 gamma [Homo sapiens]
         (452 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|9966779 eukaryotic translation initiation factor 2B, subunit ...   894   0.0  
gi|83267879 eukaryotic translation initiation factor 2B, subunit...    52   1e-06
gi|11761619 GDP-mannose pyrophosphorylase B isoform 1 [Homo sapi...    48   2e-05
gi|11761621 GDP-mannose pyrophosphorylase B isoform 2 [Homo sapi...    48   2e-05
gi|31881779 GDP-mannose pyrophosphorylase A [Homo sapiens]             36   0.082
gi|45447090 GDP-mannose pyrophosphorylase A [Homo sapiens]             36   0.082
gi|157412259 notch1-induced protein isoform a [Homo sapiens]           34   0.31 
gi|157671913 notch1-induced protein isoform b [Homo sapiens]           34   0.31 
gi|11225607 interleukin 1 receptor accessory protein-like 2 [Hom...    32   1.5  
gi|145301607 thyroid adenoma associated [Homo sapiens]                 30   3.4  
gi|38348727 thyroid adenoma associated [Homo sapiens]                  30   3.4  
gi|229093087 G protein-coupled receptor 97 [Homo sapiens]              30   4.5  
gi|117414135 apoptosis inhibitor [Homo sapiens]                        30   4.5  
gi|126116565 MYC binding protein 2 [Homo sapiens]                      29   10.0 
gi|170016077 ATPase type 13A1 [Homo sapiens]                           29   10.0 
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]    29   10.0 
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]    29   10.0 

>gi|9966779 eukaryotic translation initiation factor 2B, subunit 3
           gamma [Homo sapiens]
          Length = 452

 Score =  894 bits (2309), Expect = 0.0
 Identities = 452/452 (100%), Positives = 452/452 (100%)

Query: 1   MEFQAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTRDVQ 60
           MEFQAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTRDVQ
Sbjct: 1   MEFQAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTRDVQ 60

Query: 61  KALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPKLKTDVLVLSCDLITDVALHEVVDL 120
           KALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPKLKTDVLVLSCDLITDVALHEVVDL
Sbjct: 61  KALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPKLKTDVLVLSCDLITDVALHEVVDL 120

Query: 121 FRAYDASLAMLMRKGQDSIEPVPGQKGKKKAVEQRDFIGVDSTGKRLLFMANEADLDEEL 180
           FRAYDASLAMLMRKGQDSIEPVPGQKGKKKAVEQRDFIGVDSTGKRLLFMANEADLDEEL
Sbjct: 121 FRAYDASLAMLMRKGQDSIEPVPGQKGKKKAVEQRDFIGVDSTGKRLLFMANEADLDEEL 180

Query: 181 VIKGSILQKHPRIRFHTGLVDAHLYCLKKYIVDFLMENGSITSIRSELIPYLVRKQFSSA 240
           VIKGSILQKHPRIRFHTGLVDAHLYCLKKYIVDFLMENGSITSIRSELIPYLVRKQFSSA
Sbjct: 181 VIKGSILQKHPRIRFHTGLVDAHLYCLKKYIVDFLMENGSITSIRSELIPYLVRKQFSSA 240

Query: 241 SSQQGQEEKEEDLKKKELKSLDIYSFIKEANTLNLAPYDACWNACRGDRWEDLSRSQVRC 300
           SSQQGQEEKEEDLKKKELKSLDIYSFIKEANTLNLAPYDACWNACRGDRWEDLSRSQVRC
Sbjct: 241 SSQQGQEEKEEDLKKKELKSLDIYSFIKEANTLNLAPYDACWNACRGDRWEDLSRSQVRC 300

Query: 301 YVHIMKEGLCSRVSTLGLYMEANRQVPKLLSALCPEEPPVHSSAQIVSKHLVGVDSLIGP 360
           YVHIMKEGLCSRVSTLGLYMEANRQVPKLLSALCPEEPPVHSSAQIVSKHLVGVDSLIGP
Sbjct: 301 YVHIMKEGLCSRVSTLGLYMEANRQVPKLLSALCPEEPPVHSSAQIVSKHLVGVDSLIGP 360

Query: 361 ETQIGEKSSIKRSVIGSSCLIKDRVTITNCLLMNSVTVEEGSNIQGSVICNNAVIEKGAD 420
           ETQIGEKSSIKRSVIGSSCLIKDRVTITNCLLMNSVTVEEGSNIQGSVICNNAVIEKGAD
Sbjct: 361 ETQIGEKSSIKRSVIGSSCLIKDRVTITNCLLMNSVTVEEGSNIQGSVICNNAVIEKGAD 420

Query: 421 IKDCLIGSGQRIEAKAKRVNEVIVGNDQLMEI 452
           IKDCLIGSGQRIEAKAKRVNEVIVGNDQLMEI
Sbjct: 421 IKDCLIGSGQRIEAKAKRVNEVIVGNDQLMEI 452


>gi|83267879 eukaryotic translation initiation factor 2B, subunit 5
           epsilon, 82kDa [Homo sapiens]
          Length = 721

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 93/433 (21%), Positives = 159/433 (36%), Gaps = 64/433 (14%)

Query: 4   QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTRDVQKAL 63
           QAV++A     R   ++   P+ LLP+ N  LI Y L  L   G +E  V      + A 
Sbjct: 44  QAVLVADSFDRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCC--WKAAQ 101

Query: 64  CAEFKMKMK-------PDIVCIPDDADMGTADSLRYIYPK--LKTDVLVLSCDLITDVAL 114
             E  +K K         +  I  +      D LR +  K  +++D L++  D+I+++ +
Sbjct: 102 IKEHLLKSKWCRPTSLNVVRIITSELYRSLGDVLRDVDAKALVRSDFLLVYGDVISNINI 161

Query: 115 HEVVD---LFRAYDASLAMLMRKGQDSIEPVPGQKGKKKAVEQRDFIGVDSTGKRLLFMA 171
              ++   L R  + +++++    ++S    P      +  E    + VDST  R+L   
Sbjct: 162 TRALEEHRLRRKLEKNVSVMTMIFKESSPSHP-----TRCHEDNVVVAVDSTTNRVLHFQ 216

Query: 172 NEADLDEELVIKGSILQKHPRIRFHTGLVDAHLYCLKKYIVDFLMENGSITSIRSELIPY 231
               L                +     L+D H+      +     +N            Y
Sbjct: 217 KTQGLRRFAFPLSLFQGSSDGVEVRYDLLDCHISICSPQVAQLFTDN----------FDY 266

Query: 232 LVRKQFSSASSQQGQEEKEEDLKKKELKSLDIYSFIKE--ANTLNLAPYDACWNACRGDR 289
             R  F      +G    EE L  +    + ++   KE  A   NL  Y A         
Sbjct: 267 QTRDDF-----VRGLLVNEEILGNQ----IHMHVTAKEYGARVSNLHMYSA--------- 308

Query: 290 WEDLSRSQVRCYVHIMKEGLCSRVSTLGLYMEANRQVPKLLSALCPEEPPVHSSAQIVSK 349
              +    +R +V+ +        ST      +   + +      PE    H S      
Sbjct: 309 ---VCADVIRRWVYPLTPEANFTDSTTQSCTHSRHNIYR-----GPEVSLGHGS------ 354

Query: 350 HLVGVDSLIGPETQIGEKSSIKRSVIGSSCLIKDRVTITNCLLMNSVTVEEGSNIQGSVI 409
            ++  + L+G  T IG    I  SVIG  C I D V +    L   V V  G+ I  S++
Sbjct: 355 -ILEENVLLGSGTVIGSNCFITNSVIGPGCHIGDNVVLDQTYLWQGVRVAAGAQIHQSLL 413

Query: 410 CNNAVIEKGADIK 422
           C+NA +++   +K
Sbjct: 414 CDNAEVKERVTLK 426


>gi|11761619 GDP-mannose pyrophosphorylase B isoform 1 [Homo
           sapiens]
          Length = 387

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 35/140 (25%), Positives = 71/140 (50%), Gaps = 7/140 (5%)

Query: 4   QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVT---TRDVQ 60
           +A+++  G G+R+  LT S PKPL+   NKP++ + +  L   G + VI+     ++ ++
Sbjct: 2   KALILVGGYGTRLRPLTLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQVLE 61

Query: 61  KALCAEFKMKMKPDIVCIPDDADMGTADSL---RYIYPKLKTDVLVLSCDLITDVALHEV 117
           K + A+ + ++   I    ++  +GTA  L   R +  +      VL+ D+I D     +
Sbjct: 62  KEMKAQ-EQRLGIRISMSHEEEPLGTAGPLALARDLLSETADPFFVLNSDVICDFPFQAM 120

Query: 118 VDLFRAYDASLAMLMRKGQD 137
           V   R +    ++L+ K ++
Sbjct: 121 VQFHRHHGQEGSILVTKVEE 140


>gi|11761621 GDP-mannose pyrophosphorylase B isoform 2 [Homo
           sapiens]
          Length = 360

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 35/140 (25%), Positives = 71/140 (50%), Gaps = 7/140 (5%)

Query: 4   QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVT---TRDVQ 60
           +A+++  G G+R+  LT S PKPL+   NKP++ + +  L   G + VI+     ++ ++
Sbjct: 2   KALILVGGYGTRLRPLTLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQVLE 61

Query: 61  KALCAEFKMKMKPDIVCIPDDADMGTADSL---RYIYPKLKTDVLVLSCDLITDVALHEV 117
           K + A+ + ++   I    ++  +GTA  L   R +  +      VL+ D+I D     +
Sbjct: 62  KEMKAQ-EQRLGIRISMSHEEEPLGTAGPLALARDLLSETADPFFVLNSDVICDFPFQAM 120

Query: 118 VDLFRAYDASLAMLMRKGQD 137
           V   R +    ++L+ K ++
Sbjct: 121 VQFHRHHGQEGSILVTKVEE 140



 Score = 29.6 bits (65), Expect = 5.9
 Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 375 IGSSCLIKDRVTITNCLLMNSVTVEEGSNIQGSVICNNAVIEKGADIKDCLIGSGQRIEA 434
           IG +C I   V+     L   V VE+G  I+   +  +A I   + ++ C++G   R+  
Sbjct: 262 IGQNCSIGPNVS-----LGPGVVVEDGVCIRRCTVLRDARIRSHSWLESCIVGWRCRVGQ 316

Query: 435 KAKRVNEVIVGNDQLM 450
             +  N  ++G D ++
Sbjct: 317 WVRMENVTVLGEDVIV 332


>gi|31881779 GDP-mannose pyrophosphorylase A [Homo sapiens]
          Length = 420

 Score = 35.8 bits (81), Expect = 0.082
 Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 7   VMAVGG---GSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERV-GFEEVIVV-------T 55
           V+ +GG   G+R   L+  +PKPL PV   P+I + +    +V G +E++++        
Sbjct: 5   VILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEP 64

Query: 56  TRDVQKALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPKLKTD----VLVLSCDLITD 111
                +A   EF + ++     + + A +GT   L +   ++         VL+ D+ +D
Sbjct: 65  LTQFLEAAQQEFNLPVR----YLQEFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSD 120

Query: 112 VALHEVVDLFR 122
             L  +++  R
Sbjct: 121 FPLSAMLEAHR 131



 Score = 30.4 bits (67), Expect = 3.4
 Identities = 28/144 (19%), Positives = 57/144 (39%), Gaps = 37/144 (25%)

Query: 297 QVRCYVHIMKEGLCSRVSTLGLYMEANRQV--------PKLLSALCPEEPPVHSSAQIVS 348
           Q + YVH+  +G+ S++ + G  + A+R          P+ L+   P  P +  +  I  
Sbjct: 233 QGQIYVHLT-DGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPWIRGNVYIHP 291

Query: 349 KHLVGVDSLIGPETQIGEKSSIKRSVIGSSCLIKDRVTITNCLLMNSVTVEEGSNIQGSV 408
              V   +++GP   IG+                             VTV EG  ++ S+
Sbjct: 292 TAKVAPSAVLGPNVSIGK----------------------------GVTVGEGVRLRESI 323

Query: 409 ICNNAVIEKGADIKDCLIGSGQRI 432
           + + A +++   +   ++G G  +
Sbjct: 324 VLHGATLQEHTCVLHSIVGWGSTV 347


>gi|45447090 GDP-mannose pyrophosphorylase A [Homo sapiens]
          Length = 420

 Score = 35.8 bits (81), Expect = 0.082
 Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 7   VMAVGG---GSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERV-GFEEVIVV-------T 55
           V+ +GG   G+R   L+  +PKPL PV   P+I + +    +V G +E++++        
Sbjct: 5   VILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEP 64

Query: 56  TRDVQKALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPKLKTD----VLVLSCDLITD 111
                +A   EF + ++     + + A +GT   L +   ++         VL+ D+ +D
Sbjct: 65  LTQFLEAAQQEFNLPVR----YLQEFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSD 120

Query: 112 VALHEVVDLFR 122
             L  +++  R
Sbjct: 121 FPLSAMLEAHR 131



 Score = 30.4 bits (67), Expect = 3.4
 Identities = 28/144 (19%), Positives = 57/144 (39%), Gaps = 37/144 (25%)

Query: 297 QVRCYVHIMKEGLCSRVSTLGLYMEANRQV--------PKLLSALCPEEPPVHSSAQIVS 348
           Q + YVH+  +G+ S++ + G  + A+R          P+ L+   P  P +  +  I  
Sbjct: 233 QGQIYVHLT-DGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPWIRGNVYIHP 291

Query: 349 KHLVGVDSLIGPETQIGEKSSIKRSVIGSSCLIKDRVTITNCLLMNSVTVEEGSNIQGSV 408
              V   +++GP   IG+                             VTV EG  ++ S+
Sbjct: 292 TAKVAPSAVLGPNVSIGK----------------------------GVTVGEGVRLRESI 323

Query: 409 ICNNAVIEKGADIKDCLIGSGQRI 432
           + + A +++   +   ++G G  +
Sbjct: 324 VLHGATLQEHTCVLHSIVGWGSTV 347


>gi|157412259 notch1-induced protein isoform a [Homo sapiens]
          Length = 451

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)

Query: 5   AVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVT----TRDVQ 60
           AV+ A G G RM   T   PK   P+  +PLI Y L  LERV + + IVV       +V 
Sbjct: 49  AVLPAGGCGERMGVPT---PKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVM 105

Query: 61  KALCAEFKMK 70
           K++  +++ K
Sbjct: 106 KSIIQKYQHK 115


>gi|157671913 notch1-induced protein isoform b [Homo sapiens]
          Length = 401

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)

Query: 5   AVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVT----TRDVQ 60
           AV+ A G G RM   T   PK   P+  +PLI Y L  LERV + + IVV       +V 
Sbjct: 49  AVLPAGGCGERMGVPT---PKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVM 105

Query: 61  KALCAEFKMK 70
           K++  +++ K
Sbjct: 106 KSIIQKYQHK 115


>gi|11225607 interleukin 1 receptor accessory protein-like 2 [Homo
           sapiens]
          Length = 686

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 27/131 (20%)

Query: 162 STGKRLLFMANEADLDEELVIKGSILQK-HPRIRFH----------TGLVDAHLYCLKKY 210
           STG RL++  N+ DL+E ++     + K    I FH          T ++    YC+K  
Sbjct: 69  STGLRLMWYKNKGDLEEPIIFSEVRMSKEEDSIWFHSAEAQDSGFYTCVLRNSTYCMKVS 128

Query: 211 IVDFLMENGSITSIRSELIPYLVRKQFSSASSQQGQEEKEEDLKKKELKSLDIYSFIKEA 270
           +   + EN S     S  I YL               EK E  K+KE+   D+  F K  
Sbjct: 129 MSLTVAENESGLCYNSR-IRYL---------------EKSEVTKRKEISCPDMDDFKKSD 172

Query: 271 NTLNLAPYDAC 281
              ++  Y  C
Sbjct: 173 QEPDVVWYKEC 183


>gi|145301607 thyroid adenoma associated [Homo sapiens]
          Length = 1953

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 24/125 (19%)

Query: 208 KKYIVDFLMENGSITSIRSELIPYLVRKQFSSASSQQGQEEKEEDLKKKELKSLDIYSFI 267
           K Y++D+ +    + S   E + Y+V+   +S  ++ GQE+    L     +        
Sbjct: 542 KSYVIDYYLPK--LLSYSPESLQYMVKILQTSIDAKTGQEQSFPSLGSCNSRGA------ 593

Query: 268 KEANTLNLAPYDACWNACRG--------DRWEDLSRSQVRCYVHIMKEGLCSRVSTLGLY 319
                  L    AC    R         D WE+L  S  R    ++ +    R+ TLGL 
Sbjct: 594 -------LGALMACLRIARAHGHLQSATDTWENLV-SDARIKQGLIHQHCQVRIDTLGLL 645

Query: 320 MEANR 324
            E+NR
Sbjct: 646 CESNR 650


>gi|38348727 thyroid adenoma associated [Homo sapiens]
          Length = 1953

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 24/125 (19%)

Query: 208 KKYIVDFLMENGSITSIRSELIPYLVRKQFSSASSQQGQEEKEEDLKKKELKSLDIYSFI 267
           K Y++D+ +    + S   E + Y+V+   +S  ++ GQE+    L     +        
Sbjct: 542 KSYVIDYYLPK--LLSYSPESLQYMVKILQTSIDAKTGQEQSFPSLGSCNSRGA------ 593

Query: 268 KEANTLNLAPYDACWNACRG--------DRWEDLSRSQVRCYVHIMKEGLCSRVSTLGLY 319
                  L    AC    R         D WE+L  S  R    ++ +    R+ TLGL 
Sbjct: 594 -------LGALMACLRIARAHGHLQSATDTWENLV-SDARIKQGLIHQHCQVRIDTLGLL 645

Query: 320 MEANR 324
            E+NR
Sbjct: 646 CESNR 650


>gi|229093087 G protein-coupled receptor 97 [Homo sapiens]
          Length = 549

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 11/76 (14%)

Query: 245 GQEEKEEDLKKKELKSLDIYSFIKEANTLNLAPYDACWNACRGD-----RWEDLSRSQVR 299
           GQE+  E  +   L S ++Y         NL     C+  CR         E+L R  + 
Sbjct: 20  GQEKPTEGPRNTCLGSNNMYDIF------NLNDKALCFTKCRQSGSDSCNVENLQRYWLN 73

Query: 300 CYVHIMKEGLCSRVST 315
              H+MKEGL  +V+T
Sbjct: 74  YEAHLMKEGLTQKVNT 89


>gi|117414135 apoptosis inhibitor [Homo sapiens]
          Length = 127

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 18/83 (21%), Positives = 35/83 (42%)

Query: 58  DVQKALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPKLKTDVLVLSCDLITDVALHEV 117
           ++   LC E + KM        DD+ +G   S      ++    ++ S D++T+  L E 
Sbjct: 10  EITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQES 69

Query: 118 VDLFRAYDASLAMLMRKGQDSIE 140
           +    AY   +   M+   + +E
Sbjct: 70  IFTKEAYKKYIKDYMKSINEKLE 92


>gi|126116565 MYC binding protein 2 [Homo sapiens]
          Length = 4640

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 5/41 (12%)

Query: 238  SSASSQQGQEEKEEDLKKKELKSLDIYSFIKEANTLNLAPY 278
            SS +SQQ  EEKE  LK +   SL+I S +   N  N+AP+
Sbjct: 3032 SSLNSQQPTEEKETKLKNRH--SLEISSAL---NMFNIAPH 3067


>gi|170016077 ATPase type 13A1 [Homo sapiens]
          Length = 1204

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 9/24 (37%), Positives = 18/24 (75%)

Query: 296 SQVRCYVHIMKEGLCSRVSTLGLY 319
           S ++C  H++K+G C+ V+TL ++
Sbjct: 965 SSIQCICHVIKQGRCTLVTTLQMF 988


>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
          Length = 971

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 17/49 (34%), Positives = 24/49 (48%)

Query: 208 KKYIVDFLMENGSITSIRSELIPYLVRKQFSSASSQQGQEEKEEDLKKK 256
           KK I D+  +     S     +  L R Q  +A S Q  +EKE DL+K+
Sbjct: 122 KKLIEDYEGKLNKAQSFYERELDTLKRSQLFTAESLQASKEKEADLRKE 170


>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
          Length = 1140

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 17/49 (34%), Positives = 24/49 (48%)

Query: 208 KKYIVDFLMENGSITSIRSELIPYLVRKQFSSASSQQGQEEKEEDLKKK 256
           KK I D+  +     S     +  L R Q  +A S Q  +EKE DL+K+
Sbjct: 242 KKLIEDYEGKLNKAQSFYERELDTLKRSQLFTAESLQASKEKEADLRKE 290


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,081,418
Number of Sequences: 37866
Number of extensions: 688172
Number of successful extensions: 2081
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2049
Number of HSP's gapped (non-prelim): 35
length of query: 452
length of database: 18,247,518
effective HSP length: 106
effective length of query: 346
effective length of database: 14,233,722
effective search space: 4924867812
effective search space used: 4924867812
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.