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Search of human proteins with 9910144
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9910144 core 1 synthase, glycoprotein-N-acetylgalactosamine
3-beta-galactosyltransferase, 1 [Homo sapiens]
(363 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9910144 core 1 synthase, glycoprotein-N-acetylgalactosamine 3... 771 0.0
gi|58532584 C1GALT1-specific chaperone 1 [Homo sapiens] 120 2e-27
gi|23097329 C1GALT1-specific chaperone 1 [Homo sapiens] 120 2e-27
gi|157412240 C1GALT1-specific chaperone 1-like [Homo sapiens] 90 3e-18
gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens] 82 1e-15
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens] 73 3e-13
gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens] 67 2e-11
gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens] 65 7e-11
gi|74271816 radical fringe [Homo sapiens] 41 0.001
gi|27545323 chondroitin polymerizing factor [Homo sapiens] 39 0.007
gi|13540527 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran... 39 0.009
gi|21687139 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran... 38 0.016
gi|92091604 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran... 35 0.080
gi|15451887 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ... 34 0.18
gi|15451885 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ... 34 0.18
gi|15451883 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ... 34 0.18
gi|15451881 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ... 34 0.18
gi|5174397 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 [... 34 0.18
gi|111160385 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra... 34 0.23
gi|93141005 lunatic fringe isoform b [Homo sapiens] 33 0.52
gi|93140999 lunatic fringe isoform a [Homo sapiens] 33 0.52
gi|10304987 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ... 31 1.5
gi|122937512 myosin VIIB [Homo sapiens] 29 5.8
gi|28373094 sialyltransferase 7D isoform b [Homo sapiens] 29 7.5
gi|28373092 sialyltransferase 7D isoform a [Homo sapiens] 29 7.5
gi|21536461 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransfer... 29 7.5
gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens] 29 7.5
>gi|9910144 core 1 synthase, glycoprotein-N-acetylgalactosamine
3-beta-galactosyltransferase, 1 [Homo sapiens]
Length = 363
Score = 771 bits (1990), Expect = 0.0
Identities = 363/363 (100%), Positives = 363/363 (100%)
Query: 1 MASKSWLNFLTFLCGSAIGFLLCSQLFSILLGEKVDTQPNVLHNDPHARHSDDNGQNHLE 60
MASKSWLNFLTFLCGSAIGFLLCSQLFSILLGEKVDTQPNVLHNDPHARHSDDNGQNHLE
Sbjct: 1 MASKSWLNFLTFLCGSAIGFLLCSQLFSILLGEKVDTQPNVLHNDPHARHSDDNGQNHLE 60
Query: 61 GQMNFNADSSQHKDENTDIAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRCNKVLF 120
GQMNFNADSSQHKDENTDIAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRCNKVLF
Sbjct: 61 GQMNFNADSSQHKDENTDIAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRCNKVLF 120
Query: 121 MSSEENKDFPAVGLKTKEGRDQLYWKTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLR 180
MSSEENKDFPAVGLKTKEGRDQLYWKTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLR
Sbjct: 121 MSSEENKDFPAVGLKTKEGRDQLYWKTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLR 180
Query: 181 WLLSKYDPEEPIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIED 240
WLLSKYDPEEPIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIED
Sbjct: 181 WLLSKYDPEEPIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIED 240
Query: 241 LALGRCMEIMNVEAGDSRDTIGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYPPVEGPGC 300
LALGRCMEIMNVEAGDSRDTIGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYPPVEGPGC
Sbjct: 241 LALGRCMEIMNVEAGDSRDTIGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYPPVEGPGC 300
Query: 301 CSDLAVSFHYVDSTTMYELEYLVYHLRPYGYLYRYQPTLPERILKEISQANKNEDTKVKL 360
CSDLAVSFHYVDSTTMYELEYLVYHLRPYGYLYRYQPTLPERILKEISQANKNEDTKVKL
Sbjct: 301 CSDLAVSFHYVDSTTMYELEYLVYHLRPYGYLYRYQPTLPERILKEISQANKNEDTKVKL 360
Query: 361 GNP 363
GNP
Sbjct: 361 GNP 363
>gi|58532584 C1GALT1-specific chaperone 1 [Homo sapiens]
Length = 318
Score = 120 bits (301), Expect = 2e-27
Identities = 87/329 (26%), Positives = 154/329 (46%), Gaps = 38/329 (11%)
Query: 11 TFLCGSAIGFLLCSQLFSILLGEKVDTQPNVLHNDPHARHSDDNGQNHLEGQMNFNADSS 70
+FL G +G + C+ + +LG N +H+ H N ++ L+
Sbjct: 7 SFLKGVMLGSIFCALI--TMLGHIRIGHGNRMHHHEHHHLQAPNKEDILKIS-------- 56
Query: 71 QHKDENTDIAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFP 130
+DE +++++ R+ C ++ P+++ A VK TW + C+K F SSE K F
Sbjct: 57 --EDERMELSKSF----RVYCIILVKPKDVSLWAA-VKETWTKHCDKAEFFSSENVKVFE 109
Query: 131 AVGLKTKEGRDQLYWKTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLRWLLSKYDPEE 190
++ + T + ++ KA++Y + Y + +WF A T+ I++NL++ L K DP +
Sbjct: 110 SINMDTND----MWLMMRKAYKYAFDKYRDQYNWFFLARPTTFAIIENLKYFLLKKDPSQ 165
Query: 191 PIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFK-TDKCTHSSSI-----EDLALG 244
P Y G K + Y+ G VLS E++KR +KC + ED L
Sbjct: 166 PFYLGHTIKSGDLE-YVGMEGGIVLSVESMKRLNSLLNIPEKCPEQGGMIWKISEDKQLA 224
Query: 245 RCMEIMNVEAGDSRDTIGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYPPVEGPGCCSDL 304
C++ V A ++ D GK+ F+ + + Y+P GCCSD+
Sbjct: 225 VCLKYAGVFAENAEDADGKDVFNTKSVGLSIKEA----------MTYHPNQVVEGCCSDM 274
Query: 305 AVSFHYVDSTTMYELEYLVYHLRPYGYLY 333
AV+F+ + M+ + Y VY LR +G+++
Sbjct: 275 AVTFNGLTPNQMHVMMYGVYRLRAFGHIF 303
>gi|23097329 C1GALT1-specific chaperone 1 [Homo sapiens]
Length = 318
Score = 120 bits (301), Expect = 2e-27
Identities = 87/329 (26%), Positives = 154/329 (46%), Gaps = 38/329 (11%)
Query: 11 TFLCGSAIGFLLCSQLFSILLGEKVDTQPNVLHNDPHARHSDDNGQNHLEGQMNFNADSS 70
+FL G +G + C+ + +LG N +H+ H N ++ L+
Sbjct: 7 SFLKGVMLGSIFCALI--TMLGHIRIGHGNRMHHHEHHHLQAPNKEDILKIS-------- 56
Query: 71 QHKDENTDIAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFP 130
+DE +++++ R+ C ++ P+++ A VK TW + C+K F SSE K F
Sbjct: 57 --EDERMELSKSF----RVYCIILVKPKDVSLWAA-VKETWTKHCDKAEFFSSENVKVFE 109
Query: 131 AVGLKTKEGRDQLYWKTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLRWLLSKYDPEE 190
++ + T + ++ KA++Y + Y + +WF A T+ I++NL++ L K DP +
Sbjct: 110 SINMDTND----MWLMMRKAYKYAFDKYRDQYNWFFLARPTTFAIIENLKYFLLKKDPSQ 165
Query: 191 PIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFK-TDKCTHSSSI-----EDLALG 244
P Y G K + Y+ G VLS E++KR +KC + ED L
Sbjct: 166 PFYLGHTIKSGDLE-YVGMEGGIVLSVESMKRLNSLLNIPEKCPEQGGMIWKISEDKQLA 224
Query: 245 RCMEIMNVEAGDSRDTIGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYPPVEGPGCCSDL 304
C++ V A ++ D GK+ F+ + + Y+P GCCSD+
Sbjct: 225 VCLKYAGVFAENAEDADGKDVFNTKSVGLSIKEA----------MTYHPNQVVEGCCSDM 274
Query: 305 AVSFHYVDSTTMYELEYLVYHLRPYGYLY 333
AV+F+ + M+ + Y VY LR +G+++
Sbjct: 275 AVTFNGLTPNQMHVMMYGVYRLRAFGHIF 303
>gi|157412240 C1GALT1-specific chaperone 1-like [Homo sapiens]
Length = 315
Score = 90.1 bits (222), Expect = 3e-18
Identities = 76/296 (25%), Positives = 134/296 (45%), Gaps = 34/296 (11%)
Query: 47 HARH---SDDNGQNHLEGQMNFNADSSQHKDENTDIAENLYQKVRILCWVMTGPQNLEKK 103
H RH + D+ +HL + + + + I L + +R+ C ++ G E
Sbjct: 30 HIRHRGQTQDHEHHHLRPP-----NRNDFLNTSKVILLELSKSIRVFC-IIFGESEDESY 83
Query: 104 AKHVKATWAQRCNKVLFMSSEENKDFPAVGLKTKEGRDQLYWKTIK-AFQYVHEHYLEDA 162
+K TW + C+K ++ + F E D+ W ++ A++YV E Y ++
Sbjct: 84 WAVLKETWTKHCDKAELYDTKNDNLFNI------ESNDR--WVQMRTAYKYVFEKYGDNY 135
Query: 163 DWFLKADDDTYVILDNLRWLLSKYDPEEPIYFGRRFKPYVKQGYMSGGAGYVLSKEALKR 222
+WF A T+ +++NL++LL D +P Y G + Y++ G VLS+E +KR
Sbjct: 136 NWFFLALPTTFAVIENLKYLLFTRDASQPFYLGHTV-IFGDLEYVTVEGGIVLSRELMKR 194
Query: 223 FVDAF-KTDKCTHSSSI----EDLALGRCMEIMNVEAGDSRDTIGKETFHPFVPEHHLIK 277
++ C S I ED L C++ V A ++ D G++ F+ P LI+
Sbjct: 195 LNRLLDNSETCADQSVIWKLSEDKQLAICLKYAGVHAENAEDYEGRDVFNT-KPIAQLIE 253
Query: 278 GYLPRTFWYWNYNYYPPVEGPGCCSDLAVSFHYVDSTTMYELEYLVYHLRPYGYLY 333
L P GCCSD+A++F+ + M + Y +Y LR +G+ +
Sbjct: 254 EALSNN---------PQQVVEGCCSDMAITFNGLTPQKMEVMMYGLYRLRAFGHYF 300
>gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]
Length = 802
Score = 81.6 bits (200), Expect = 1e-15
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 20/263 (7%)
Query: 1 MASKSWLNFLTFLCGSAIGFLLCSQLFSILLGEKVDTQPNVLHNDPHARHSDDNGQNHLE 60
MA++ +L+ L G +GF+L S+L E P P S +
Sbjct: 1 MAARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGPR-RRASPEGCRSGQAAASQAG 59
Query: 61 GQMNFNADSSQHKDENTDIAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRC-NKVL 119
G +A +Q +D + + VMT + L+ +A TW++ KV
Sbjct: 60 GARG-DARGAQLWPPGSDPDGGPRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQ 118
Query: 120 FMSSEENKDFPAVGLKTKEGRDQLYWKTIKAF---QYVHEHYLEDADWFLKADDDTYVIL 176
F SSE + + + G D Y K+F +Y+H+HYL+ +WF++ADDD Y+
Sbjct: 119 FFSSEGSDTSVPIPVVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKG 178
Query: 177 DNLRWLLSKYDPEEPIYFGR----------RFKPYVKQGYMSGGAGYVLSKEALKRFVDA 226
D L L + EP++ G+ + + + GG G ++S+E L+R V
Sbjct: 179 DRLENFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVP- 237
Query: 227 FKTDKCTHS--SSIEDLALGRCM 247
KC ++ ED+ +GRC+
Sbjct: 238 -HIGKCLREMYTTHEDVEVGRCV 259
>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
Length = 882
Score = 73.2 bits (178), Expect = 3e-13
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 18/173 (10%)
Query: 93 VMTGPQNLEKKAKHVKATWAQRC-NKVLFMSSEENKDF----PAVGLKTKEGRDQLYWKT 147
VMT + L +A + TWA+ +V F SS++ + P + + G D Y
Sbjct: 177 VMTAQKYLGSRALAAQRTWARFIPGRVEFFSSQQPPNAGQPPPPLPVIALPGVDDSYPPQ 236
Query: 148 IKAF---QYVHEHYLEDADWFLKADDDTYVILDNLRWLLSKYDPEEPIYFGRRFKPYVK- 203
K+F +Y+H+HYL+ +WF++ADDD Y+ D L L + +P+Y G+ ++
Sbjct: 237 KKSFMMIKYMHDHYLDKYEWFMRADDDVYIKGDKLEEFLRSLNSSKPLYLGQTGLGNIEE 296
Query: 204 ---------QGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIEDLALGRCM 247
+ + GG G + S+E L+R V ++ ED+ +GRC+
Sbjct: 297 LGKLGLEPGENFCMGGPGMIFSREVLRRMVPHIGECLREMYTTHEDVEVGRCV 349
>gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens]
Length = 498
Score = 67.0 bits (162), Expect = 2e-11
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 107 VKATWAQRCNKVLFMSSEENKDFPAVGLKTKEGRDQLYWKTIKAFQYVHEHYLEDADWFL 166
VK TW + + + + S P V L KT + + W +
Sbjct: 287 VKQTWESQASLIEYYSDYTENSIPTVDLGIPNTDRGHCGKTFAILERFLNRSQDKTAWLV 346
Query: 167 KADDDTYVILDNLRWLLSKYDPEEPIYFGRRFKPYVKQG---YMSGGAGYVLSKEALKRF 223
DDDT + + L+ LLS YD EP++ G R+ + G Y++GG G V S+EA++R
Sbjct: 347 IVDDDTLISISRLQHLLSCYDSGEPVFLGERYGYGLGTGGYSYITGGGGMVFSREAVRRL 406
Query: 224 VDAFKTDKCTHSSSIEDLALGRCMEIMNV 252
+ + +C + + +D+ LG C + +
Sbjct: 407 LAS--KCRCYSNDAPDDMVLGMCFSGLGI 433
Score = 33.1 bits (74), Expect = 0.40
Identities = 17/98 (17%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 100 LEKKAKHVKATWAQRCNK-VLFMSSEENKDFPAVGLKTKEGRDQLYWKTIKAFQYVHEHY 158
++ ++ A A++ K +L +++ ++ P+V L + + + W + + Y
Sbjct: 62 IQSQSNSFHAKRAEQLKKSILKQAADLTQELPSVLLLHQLAKQEGAWTILPLLPHFSVTY 121
Query: 159 LEDADWFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR 196
++ W +++T + + L L +YDP + + G+
Sbjct: 122 SRNSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGK 159
>gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens]
Length = 772
Score = 65.5 bits (158), Expect = 7e-11
Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 5/173 (2%)
Query: 79 IAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFPAVGLKTKE 138
I L + R+L V+T L A V T A ++L+ + + PA
Sbjct: 92 IQTELGSRERLLVAVLTSRATLSTLAVAVNRTVAHHFPRLLYFTGQRGARAPAGMQVVSH 151
Query: 139 GRDQLYWKTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLRWLLSKYDPEEPIYFGRRF 198
G ++ W + +++H H+ D DWF DDTYV L L + +Y GR
Sbjct: 152 GDERPAWLMSETLRHLHTHFGADYDWFFIMQDDTYVQAPRLAALAGHLSINQDLYLGRA- 210
Query: 199 KPYVKQG----YMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIEDLALGRCM 247
+ ++ G Y GG GY+LS+ L R + S+ D LGRC+
Sbjct: 211 EEFIGAGEQARYCHGGFGYLLSRSLLLRLRPHLDGCRGDILSARPDEWLGRCL 263
>gi|74271816 radical fringe [Homo sapiens]
Length = 331
Score = 41.2 bits (95), Expect = 0.001
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 16/70 (22%)
Query: 164 WFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR----------------RFKPYVKQGYM 207
WF DDD YV +L LLS + P + +Y GR R VK +
Sbjct: 141 WFCHVDDDNYVNARSLLHLLSSFSPSQDVYLGRPSLDHPIEATERVQGGRTVTTVKFWFA 200
Query: 208 SGGAGYVLSK 217
+GGAG+ LS+
Sbjct: 201 TGGAGFCLSR 210
>gi|27545323 chondroitin polymerizing factor [Homo sapiens]
Length = 775
Score = 38.9 bits (89), Expect = 0.007
Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 8/176 (4%)
Query: 79 IAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFPAVGLKTKE 138
I+ L + R+L V+T L V T R +V+F++ + P
Sbjct: 109 ISTELGIRQRLLVAVLTSQTTLPTLGVAVNRTLGHRLERVVFLTGARGRRAPPGMAVVTL 168
Query: 139 GRDQLYWKTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLRWLLSKYD--PEEPIYFGR 196
G ++ A +++ E + +D DWF D TY L L +Y GR
Sbjct: 169 GEERPIGHLHLALRHLLEQHGDDFDWFFLVPDTTYTEAHGLARLTGHLSLASAAHLYLGR 228
Query: 197 RFKPYV-----KQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIEDLALGRCM 247
+ ++ Y GG G +LS+ L++ + + S+ D LGRC+
Sbjct: 229 P-QDFIGGEPTPGRYCHGGFGVLLSRMLLQQLRPHLEGCRNDIVSARPDEWLGRCI 283
>gi|13540527 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 4 [Homo
sapiens]
Length = 378
Score = 38.5 bits (88), Expect = 0.009
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 89 ILCWVMTGPQNLEKKAKHVKATWAQ-------RCNKVLFMSSEENKDFPA--VGLKTKEG 139
+L + + P ++E++A +++TW + R K++F+ PA + +++E
Sbjct: 120 LLLAIKSQPGHVERRAA-IRSTWGRVGGWARGRQLKLVFLLGVAGSAPPAQLLAYESREF 178
Query: 140 RDQLYWKTIKAF--QYVHEHYLE--------DADWFLKADDDTYVILDNLRWLLSKYDPE 189
D L W + F + E +L+ A + LK DDD +V + N+ L +DP
Sbjct: 179 DDILQWDFTEDFFNLTLKELHLQRWVVAACPQAHFMLKGDDDVFVHVPNVLEFLDGWDPA 238
Query: 190 EPIYFG--------------RRFKP---YVKQGY--MSGGAGYVLSKEALKRFVDAFKTD 230
+ + G + F P Y Y +GG GYV+S+ ++R + A D
Sbjct: 239 QDLLVGDVIRQALPNRNTKVKYFIPPSMYRATHYPPYAGGGGYVMSRATVRR-LQAIMED 297
Query: 231 KCTHSSSIEDLALGRCM 247
I+D+ +G C+
Sbjct: 298 --AELFPIDDVFVGMCL 312
>gi|21687139 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 7 [Homo
sapiens]
Length = 401
Score = 37.7 bits (86), Expect = 0.016
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 24/134 (17%)
Query: 141 DQLYWKTIKAFQYVH--EHYLEDADWFLKADDDTYVILDNLRWLLSKYDPEEPIYFG--- 195
D + T+K ++ + Y + K DDD +V NL L+ P+E ++ G
Sbjct: 210 DTFFNLTLKEIHFLKWLDIYCPHVPFIFKGDDDVFVNPTNLLEFLADRQPQENLFVGDVL 269
Query: 196 RRFKP--------------YVKQGY--MSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIE 239
+ +P Y K Y +GG G++++ +R A T I+
Sbjct: 270 QHARPIRRKDNKYYIPGALYGKASYPPYAGGGGFLMAGSLARRLHHACDT---LELYPID 326
Query: 240 DLALGRCMEIMNVE 253
D+ LG C+E++ V+
Sbjct: 327 DVFLGMCLEVLGVQ 340
>gi|92091604 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 3 [Homo
sapiens]
Length = 372
Score = 35.4 bits (80), Expect = 0.080
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 53/171 (30%)
Query: 112 AQRCNKVLFMSSEENKDFPAVGLKTKEGRDQLYWKTIKAFQYVH--EHYLEDADWFLKAD 169
A++ N++L + ++ + D + + D + T+K ++ E +A + L D
Sbjct: 156 ARKVNRLLELEAQTHGD-----ILQWDFHDSFFNLTLKQVLFLQWQETRCANASFVLNGD 210
Query: 170 DDTYVILDNLRWLLSKYDPEEPIYFGR-------------------------RFKPYVKQ 204
DD + DN+ + L +DP ++ G+ R+ PY
Sbjct: 211 DDVFAHTDNMVFYLQDHDPGRHLFVGQLIQNVGPIRAFWSKYYVPEVVTQNERYPPY--- 267
Query: 205 GYMSGGAGYVLSK---EALKR---FVDAFKTDKCTHSSSIEDLALGRCMEI 249
GG G++LS+ AL+R +D F I+D+ LG C+E+
Sbjct: 268 ---CGGGGFLLSRFTAAALRRAAHVLDIF---------PIDDVFLGMCLEL 306
>gi|15451887 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
[Homo sapiens]
Length = 310
Score = 34.3 bits (77), Expect = 0.18
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 23/126 (18%)
Query: 146 KTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLRWLLSKYDP------------EEPI- 192
KT+ ++VH + A + +K D D ++ +D L LL K + E PI
Sbjct: 134 KTMMGIEWVHR-FCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTRFFTGFLKLNEFPIR 192
Query: 193 ------YFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIEDLALGRC 246
+ + P+ + G GYV S + + + K +ED+ +G C
Sbjct: 193 QPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQ---VYNVSKSVPYIKLEDVFVGLC 249
Query: 247 MEIMNV 252
+E +N+
Sbjct: 250 LERLNI 255
>gi|15451885 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
[Homo sapiens]
Length = 310
Score = 34.3 bits (77), Expect = 0.18
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 23/126 (18%)
Query: 146 KTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLRWLLSKYDP------------EEPI- 192
KT+ ++VH + A + +K D D ++ +D L LL K + E PI
Sbjct: 134 KTMMGIEWVHR-FCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTRFFTGFLKLNEFPIR 192
Query: 193 ------YFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIEDLALGRC 246
+ + P+ + G GYV S + + + K +ED+ +G C
Sbjct: 193 QPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQ---VYNVSKSVPYIKLEDVFVGLC 249
Query: 247 MEIMNV 252
+E +N+
Sbjct: 250 LERLNI 255
>gi|15451883 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
[Homo sapiens]
Length = 310
Score = 34.3 bits (77), Expect = 0.18
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 23/126 (18%)
Query: 146 KTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLRWLLSKYDP------------EEPI- 192
KT+ ++VH + A + +K D D ++ +D L LL K + E PI
Sbjct: 134 KTMMGIEWVHR-FCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTRFFTGFLKLNEFPIR 192
Query: 193 ------YFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIEDLALGRC 246
+ + P+ + G GYV S + + + K +ED+ +G C
Sbjct: 193 QPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQ---VYNVSKSVPYIKLEDVFVGLC 249
Query: 247 MEIMNV 252
+E +N+
Sbjct: 250 LERLNI 255
>gi|15451881 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
[Homo sapiens]
Length = 310
Score = 34.3 bits (77), Expect = 0.18
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 23/126 (18%)
Query: 146 KTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLRWLLSKYDP------------EEPI- 192
KT+ ++VH + A + +K D D ++ +D L LL K + E PI
Sbjct: 134 KTMMGIEWVHR-FCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTRFFTGFLKLNEFPIR 192
Query: 193 ------YFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIEDLALGRC 246
+ + P+ + G GYV S + + + K +ED+ +G C
Sbjct: 193 QPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQ---VYNVSKSVPYIKLEDVFVGLC 249
Query: 247 MEIMNV 252
+E +N+
Sbjct: 250 LERLNI 255
>gi|5174397 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
[Homo sapiens]
Length = 310
Score = 34.3 bits (77), Expect = 0.18
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 23/126 (18%)
Query: 146 KTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLRWLLSKYDP------------EEPI- 192
KT+ ++VH + A + +K D D ++ +D L LL K + E PI
Sbjct: 134 KTMMGIEWVHR-FCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTRFFTGFLKLNEFPIR 192
Query: 193 ------YFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIEDLALGRC 246
+ + P+ + G GYV S + + + K +ED+ +G C
Sbjct: 193 QPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQ---VYNVSKSVPYIKLEDVFVGLC 249
Query: 247 MEIMNV 252
+E +N+
Sbjct: 250 LERLNI 255
>gi|111160385 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 9 [Homo
sapiens]
Length = 402
Score = 33.9 bits (76), Expect = 0.23
Identities = 43/175 (24%), Positives = 64/175 (36%), Gaps = 37/175 (21%)
Query: 158 YLEDADWFLKADDDTYVILDNLRWLLSKYDPEEPIYFG-----------RRFKPYVKQGY 206
+ D + K D D +V + NL L+ DP + + G R K Y+ +
Sbjct: 218 FCPDVRFVFKGDADVFVNVGNLLEFLAPRDPAQDLLAGDVIVHARPIRTRASKYYIPEAV 277
Query: 207 --------MSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIEDLALGRCMEIMNV--EAGD 256
+GG G+VLS L R A I+D+ LG C++ + + E
Sbjct: 278 YGLPAYPAYAGGGGFVLSGATLHRLAGACAQ---VELFPIDDVFLGMCLQRLRLTPEPHP 334
Query: 257 SRDTIG---------KETFHP-FVPEHHLIKGYLPRTFW-YWNYNYYPPVEGPGC 300
+ T G TF P F E ++ G W W + P GP C
Sbjct: 335 AFRTFGIPQPSAAPHLSTFDPCFYRELVVVHGLSAADIWLMWRLLHGP--HGPAC 387
>gi|93141005 lunatic fringe isoform b [Homo sapiens]
Length = 361
Score = 32.7 bits (73), Expect = 0.52
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 18/80 (22%)
Query: 155 HEHYLEDA-DWFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR----------------R 197
++ ++E WF DDD YV L L LL+ Y +Y G+ +
Sbjct: 185 YDRFIESGRKWFCHVDDDNYVNLRALLRLLASYPHTRDVYVGKPSLDRPIQAMERVSENK 244
Query: 198 FKPYVKQGYMSGGAGYVLSK 217
+P V + +GGAG+ +S+
Sbjct: 245 VRP-VHFWFATGGAGFCISR 263
>gi|93140999 lunatic fringe isoform a [Homo sapiens]
Length = 379
Score = 32.7 bits (73), Expect = 0.52
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 18/80 (22%)
Query: 155 HEHYLEDA-DWFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR----------------R 197
++ ++E WF DDD YV L L LL+ Y +Y G+ +
Sbjct: 185 YDRFIESGRKWFCHVDDDNYVNLRALLRLLASYPHTRDVYVGKPSLDRPIQAMERVSENK 244
Query: 198 FKPYVKQGYMSGGAGYVLSK 217
+P V + +GGAG+ +S+
Sbjct: 245 VRP-VHFWFATGGAGFCISR 263
>gi|10304987 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1
[Homo sapiens]
Length = 326
Score = 31.2 bits (69), Expect = 1.5
Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 24/127 (18%)
Query: 146 KTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLRWLLSK-------------------- 185
KT+ ++V + A + +K D D +V +DNL + L K
Sbjct: 155 KTLMGMRWVAT-FCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYVINGGPI 213
Query: 186 YDPEEPIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIEDLALGR 245
D Y R P G GY+ S + + +KT T +ED+ +G
Sbjct: 214 RDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELI---YKTSLHTRLLHLEDVYVGL 270
Query: 246 CMEIMNV 252
C+ + +
Sbjct: 271 CLRKLGI 277
>gi|122937512 myosin VIIB [Homo sapiens]
Length = 2116
Score = 29.3 bits (64), Expect = 5.8
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 22 LCSQLFSILLGEKVDTQPNVLHNDPHARHSDDNGQNHLEGQMNFNADSSQHKDEN---TD 78
+ +L S+ K QP +H+ AR G H G++ + A+ K+ + TD
Sbjct: 524 MLQKLNSVHANNKAFLQPKNIHD---ARF----GIAHFAGEVYYQAEGFLEKNRDVLSTD 576
Query: 79 IAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFPAVGLKTKE 138
I +Y + + E K H A+ N LF S++ NK +G + K+
Sbjct: 577 ILTLVYSSKNKFLREIFNLELAETKLGHGTIRQAKAGNH-LFKSADSNKRPSTLGSQFKQ 635
Query: 139 GRDQL 143
DQL
Sbjct: 636 SLDQL 640
>gi|28373094 sialyltransferase 7D isoform b [Homo sapiens]
Length = 218
Score = 28.9 bits (63), Expect = 7.5
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 241 LALGRCMEIMNVEAGDSRDTIGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYP 293
LAL C EI V G D+ +E HP VP H+ KG L Y + P
Sbjct: 136 LALELCEEI--VVYGMVSDSYCREKSHPSVPYHYFEKGRLDECQMYLAHEQAP 186
>gi|28373092 sialyltransferase 7D isoform a [Homo sapiens]
Length = 302
Score = 28.9 bits (63), Expect = 7.5
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 241 LALGRCMEIMNVEAGDSRDTIGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYP 293
LAL C EI V G D+ +E HP VP H+ KG L Y + P
Sbjct: 220 LALELCEEI--VVYGMVSDSYCREKSHPSVPYHYFEKGRLDECQMYLAHEQAP 270
>gi|21536461 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
[Homo sapiens]
Length = 321
Score = 28.9 bits (63), Expect = 7.5
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 28/110 (25%)
Query: 164 WFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR----------RFKPY-----VKQGYMS 208
WF DDD YV L LL + +Y GR +P+ V+ + +
Sbjct: 137 WFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRPSLNRPIHASEPQPHNRTRLVQFWFAT 196
Query: 209 GGAGYVLSKE-ALK--------RFVDAFK----TDKCTHSSSIEDLALGR 245
GGAG+ ++++ ALK RF+D D CT IE GR
Sbjct: 197 GGAGFCINRKLALKMAPWASGSRFMDTSALIRLPDDCTMGYIIECKLGGR 246
>gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens]
Length = 446
Score = 28.9 bits (63), Expect = 7.5
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 94 MTGPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFPAVGLKTKEGRDQLYWKTIKAFQY 153
+ G L A H + +W QRC + L ++ K + +K ++ A Y
Sbjct: 160 LQGNPMLAATAPHFEESWGQRCRR-LRKNTGNQKALDSDAESSKSQAEEKILGQTHAVPY 218
Query: 154 VHEHYLEDAD 163
+HY +D D
Sbjct: 219 EEDHYAKDPD 228
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,002,630
Number of Sequences: 37866
Number of extensions: 672647
Number of successful extensions: 1340
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1310
Number of HSP's gapped (non-prelim): 29
length of query: 363
length of database: 18,247,518
effective HSP length: 104
effective length of query: 259
effective length of database: 14,309,454
effective search space: 3706148586
effective search space used: 3706148586
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.