Guide to the Human Genome
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Name: EYA4 Sequence: fasta or formatted (616aa) NCBI GI: 98991763
Description:

eyes absent 4 isoform b

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [639aa] eyes absent 4 isoform d
alt prot [639aa] eyes absent 4 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         40           3
 C cysteine            1.1          7           1
 D aspartate           5.2         32           2
 E glutamate           4.5         28           3
 F phenylalanine       2.9         18           2
 G glycine             7.5         46           3
 H histidine           1.6         10           1
 I isoleucine          3.2         20           2
 K lysine              3.7         23           2
 L leucine             8.9         55           2
 M methionine          2.4         15           1
 N asparagine          4.4         27           2
 P proline             6.0         37           3
 Q glutamine           6.0         37           2
 R arginine            3.4         21           2
 S serine             13.1         81           2
 T threonine           8.8         54           3
 V valine              4.5         28           2
 W tryptophan          0.8          5           1
 Y tyrosine            5.2         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eyes absent 4 isoform b 
EYA4                  0.988   eyes absent 4 isoform a 
EYA4                  0.973   eyes absent 4 isoform d 
EYA1                  0.677   eyes absent 1 isoform b 
EYA1                  0.677   eyes absent 1 isoform b 
EYA1                  0.652   eyes absent 1 isoform a 
EYA1                  0.615   eyes absent 1 isoform c 
EYA2                  0.479   eyes absent 2 isoform a 
EYA2                  0.479   eyes absent 2 isoform b 
EYA2                  0.479   eyes absent 2 isoform a 
EYA2                  0.479   eyes absent 2 isoform a 
EYA2                  0.454   eyes absent 2 isoform c 
EYA3                  0.453   eyes absent 3 
MUC12                 0.025   PREDICTED: mucin 12 
MUC12                 0.023   PREDICTED: mucin 12, cell surface associated 
POLR2A                0.022   DNA-directed RNA polymerase II A 
EWSR1                 0.020   Ewing sarcoma breakpoint region 1 isoform 1 
MUC6                  0.020   mucin 6, gastric 
NUP153                0.019   nucleoporin 153kDa 
LOC100130716          0.017   PREDICTED: similar to mucin 11 
EWSR1                 0.016   Ewing sarcoma breakpoint region 1 isoform 4 
EWSR1                 0.016   Ewing sarcoma breakpoint region 1 isoform 3 
EWSR1                 0.016   Ewing sarcoma breakpoint region 1 isoform 2 
MUC12                 0.016   PREDICTED: mucin 12 
MUC12                 0.016   PREDICTED: mucin 12 
LOC100133714          0.016   PREDICTED: similar to Mucin-12, partial 
EWSR1                 0.016   Ewing sarcoma breakpoint region 1 isoform 5 
ARID1A                0.016   AT rich interactive domain 1A isoform a 
ARID1A                0.016   AT rich interactive domain 1A isoform b 
LOC100130716          0.015   PREDICTED: similar to Mucin-12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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