Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 93141029
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|93141029 paralemmin isoform 2 [Homo sapiens]
(343 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|93141029 paralemmin isoform 2 [Homo sapiens] 672 0.0
gi|93141031 paralemmin isoform 1 [Homo sapiens] 651 0.0
gi|82617626 paralemmin 2 isoform b [Homo sapiens] 188 7e-48
gi|82524851 paralemmin 2 isoform a [Homo sapiens] 183 2e-46
gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens] 109 3e-24
gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens] 109 3e-24
gi|8923243 palmdelphin [Homo sapiens] 90 3e-18
gi|222537747 hypothetical protein LOC342979 [Homo sapiens] 70 2e-12
gi|22035602 mitogen-activated protein kinase kinase kinase kinas... 56 5e-08
gi|187761324 shootin1 isoform a [Homo sapiens] 54 2e-07
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 54 3e-07
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 54 3e-07
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 54 3e-07
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 54 3e-07
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 54 3e-07
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 54 3e-07
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 54 3e-07
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 54 3e-07
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 54 3e-07
gi|22035606 mitogen-activated protein kinase kinase kinase kinas... 51 1e-06
gi|50511340 shootin1 isoform b [Homo sapiens] 49 5e-06
gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo sa... 47 2e-05
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 47 3e-05
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 47 3e-05
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 47 3e-05
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 47 3e-05
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 46 6e-05
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 46 6e-05
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 46 6e-05
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 46 6e-05
>gi|93141029 paralemmin isoform 2 [Homo sapiens]
Length = 343
Score = 672 bits (1734), Expect = 0.0
Identities = 343/343 (100%), Positives = 343/343 (100%)
Query: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTP 60
MEVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTP
Sbjct: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTP 60
Query: 61 SSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRA 120
SSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRA
Sbjct: 61 SSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRA 120
Query: 121 PAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAENGI 180
PAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAENGI
Sbjct: 121 PAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAENGI 180
Query: 181 HPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQPGEAT 240
HPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQPGEAT
Sbjct: 181 HPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQPGEAT 240
Query: 241 SGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDTITAELVVIEDAAEPKEPAPPN 300
SGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDTITAELVVIEDAAEPKEPAPPN
Sbjct: 241 SGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDTITAELVVIEDAAEPKEPAPPN 300
Query: 301 GSAAEPPTEAASREENQAGPEATTSDPQDLDMKKHRCKCCSIM 343
GSAAEPPTEAASREENQAGPEATTSDPQDLDMKKHRCKCCSIM
Sbjct: 301 GSAAEPPTEAASREENQAGPEATTSDPQDLDMKKHRCKCCSIM 343
>gi|93141031 paralemmin isoform 1 [Homo sapiens]
Length = 387
Score = 651 bits (1679), Expect = 0.0
Identities = 343/387 (88%), Positives = 343/387 (88%), Gaps = 44/387 (11%)
Query: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTP 60
MEVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTP
Sbjct: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTP 60
Query: 61 SSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRA 120
SSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRA
Sbjct: 61 SSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRA 120
Query: 121 PAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKA------------- 167
PAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKA
Sbjct: 121 PAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAAMYSVEITVEKDK 180
Query: 168 -------------------------------VVHAVDGTAENGIHPLSSSEVDELIHKAD 196
VVHAVDGTAENGIHPLSSSEVDELIHKAD
Sbjct: 181 VTGETRVLSSTTLLPRQPLPLGIKVYEDETKVVHAVDGTAENGIHPLSSSEVDELIHKAD 240
Query: 197 EVTLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTM 256
EVTLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTM
Sbjct: 241 EVTLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTM 300
Query: 257 IFMGYQNVEDEAETKKVLGLQDTITAELVVIEDAAEPKEPAPPNGSAAEPPTEAASREEN 316
IFMGYQNVEDEAETKKVLGLQDTITAELVVIEDAAEPKEPAPPNGSAAEPPTEAASREEN
Sbjct: 301 IFMGYQNVEDEAETKKVLGLQDTITAELVVIEDAAEPKEPAPPNGSAAEPPTEAASREEN 360
Query: 317 QAGPEATTSDPQDLDMKKHRCKCCSIM 343
QAGPEATTSDPQDLDMKKHRCKCCSIM
Sbjct: 361 QAGPEATTSDPQDLDMKKHRCKCCSIM 387
>gi|82617626 paralemmin 2 isoform b [Homo sapiens]
Length = 379
Score = 188 bits (477), Expect = 7e-48
Identities = 133/389 (34%), Positives = 198/389 (50%), Gaps = 64/389 (16%)
Query: 6 AETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASE 65
AE +ERLQAIAEKRKRQ EIE KR+QL+++ LQH KSK LRE+WLL+G P+ +E
Sbjct: 4 AEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTAE 63
Query: 66 GDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKEN-------------- 111
+E RRQ ++DE + + LED++ RLE+EI+ LE + + +AKE
Sbjct: 64 EEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLE-SEESQISAKEQIILEKLKETEKSFK 122
Query: 112 ------AAAPSPVRAPAPSPAKEER--KTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSP 163
++ V A + K+++ +T+++ S P G V ++ D
Sbjct: 123 DFQKGFSSTDGAVYAMEINVEKDKQTGETKILSTSTIGPEG------VHQKGVKVYDDGT 176
Query: 164 MMKAVVHAVDGTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTT 223
+ V + ENG+H LS+ +V+ELI KA + +L G R + + +
Sbjct: 177 KVVYEVRSGGTVVENGVHKLSTKDVEELIQKAGQSSLG-----GGHVSERTVIADGSLSH 231
Query: 224 PSRR------EITGVQAQPGEATSGPPGIQPGQEP-----------PVTMIFMGYQNVED 266
P ++ V + +SG PG Q Q P PVTMIFMGYQN+ED
Sbjct: 232 PKEHMLCKEAKLEMVHKSRKDHSSGNPG-QQAQAPSAAGPEANLDQPVTMIFMGYQNIED 290
Query: 267 EAETKKVLGLQDTITAELVVIEDAAEPK-------EPAPPNGSAAE-----PPTEAASRE 314
E ETKKVLG +TI AELV+I++ E + + +G+AAE P ++
Sbjct: 291 EEETKKVLGYDETIKAELVLIDEDDEKSLREKTVTDVSTIDGNAAELVSGRPVSDTTEPS 350
Query: 315 ENQAGPEATTSDPQDLDMKKHRCKCCSIM 343
+ E+ ++P KK RC+CC +M
Sbjct: 351 SPEGKEESLATEPAPGTQKKKRCQCCVVM 379
>gi|82524851 paralemmin 2 isoform a [Homo sapiens]
Length = 413
Score = 183 bits (465), Expect = 2e-46
Identities = 138/419 (32%), Positives = 198/419 (47%), Gaps = 90/419 (21%)
Query: 6 AETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASE 65
AE +ERLQAIAEKRKRQ EIE KR+QL+++ LQH KSK LRE+WLL+G P+ +E
Sbjct: 4 AEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTAE 63
Query: 66 GDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPS--------- 116
+E RRQ ++DE + + LED++ RLE+EI+ LE +S +AKE
Sbjct: 64 EEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQ-ISAKEQIILEKLKETEKSFK 122
Query: 117 ------------------------PV---RAPAPSPAKEERKTEVVMNSQQTPVGTPKDK 149
P+ R PSP ++ + + + + KDK
Sbjct: 123 DFQKGFSSTDGDAVNYISSQLPDLPILCSRTAEPSPGQDGTSRAAAVYAME--INVEKDK 180
Query: 150 RVSNTPLRTVDG----SPMMKAVVHAVDGT------------AENGIHPLSSSEVDELIH 193
+ T + + K V DGT ENG+H LS+ +V+ELI
Sbjct: 181 QTGETKILSTSTIGPEGVHQKGVKVYDDGTKVVYEVRSGGTVVENGVHKLSTKDVEELIQ 240
Query: 194 KADEVTLSEAGSTAGAAETRGAVEGAARTTPSRR------EITGVQAQPGEATSGPPGIQ 247
KA + +L G R + + + P ++ V + +SG PG Q
Sbjct: 241 KAGQSSLG-----GGHVSERTVIADGSLSHPKEHMLCKEAKLEMVHKSRKDHSSGNPG-Q 294
Query: 248 PGQEP-----------PVTMIFMGYQNVEDEAETKKVLGLQDTITAELVVIEDAAEPK-- 294
Q P PVTMIFMGYQN+EDE ETKKVLG +TI AELV+I++ E
Sbjct: 295 QAQAPSAAGPEANLDQPVTMIFMGYQNIEDEEETKKVLGYDETIKAELVLIDEDDEKSLR 354
Query: 295 -----EPAPPNGSAAE-----PPTEAASREENQAGPEATTSDPQDLDMKKHRCKCCSIM 343
+ + +G+AAE P ++ + E+ ++P KK RC+CC +M
Sbjct: 355 EKTVTDVSTIDGNAAELVSGRPVSDTTEPSSPEGKEESLATEPAPGTQKKKRCQCCVVM 413
>gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]
Length = 1090
Score = 109 bits (273), Expect = 3e-24
Identities = 56/105 (53%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 6 AETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASE 65
AE +ERLQAIAEKRKRQ EIE KR+QL+++ LQH KSK LRE+WLL+G P+ +E
Sbjct: 2 AEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTAE 61
Query: 66 GDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKE 110
+E RRQ ++DE + + LED++ RLE+EI+ LE + + +AKE
Sbjct: 62 EEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLE-SEESQISAKE 105
>gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]
Length = 1103
Score = 109 bits (273), Expect = 3e-24
Identities = 56/105 (53%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 6 AETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASE 65
AE +ERLQAIAEKRKRQ EIE KR+QL+++ LQH KSK LRE+WLL+G P+ +E
Sbjct: 2 AEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTAE 61
Query: 66 GDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKE 110
+E RRQ ++DE + + LED++ RLE+EI+ LE + + +AKE
Sbjct: 62 EEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLE-SEESQISAKE 105
>gi|8923243 palmdelphin [Homo sapiens]
Length = 551
Score = 89.7 bits (221), Expect = 3e-18
Identities = 45/97 (46%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Query: 14 RLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQ 73
RLQAI +KRK Q EI KR ++E+++ + QHLK KALRE+WLL+G S+ + E++++Q
Sbjct: 10 RLQAITDKRKIQEEISQKRLKIEEDKLKHQHLKKKALREKWLLDGI--SSGKEQEEMKKQ 67
Query: 74 MQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKE 110
Q D+ + ++LE S+ RLEKEI+ LE+ + +T +E
Sbjct: 68 NQQDQHQIQVLEQSILRLEKEIQDLEKAELQISTKEE 104
Score = 52.8 bits (125), Expect = 5e-07
Identities = 39/95 (41%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 243 PPGIQPGQEPPVTMIFMGYQNVEDEAETKKVL-GLQDTITAELVVIEDAAEPKE------ 295
PP I + PVTMIFMGYQ ED E KK L G I AELVVI+D E E
Sbjct: 404 PPDINDTE--PVTMIFMGYQQAEDSEEDKKFLTGYDGIIHAELVVIDDEEEEDEGEAEKP 461
Query: 296 ---PAPPNGSAAEP--PTEAASREENQAGPEATTS 325
P P+ +P PT R+ ++A P T+
Sbjct: 462 SYHPIAPHSQVYQPAKPT-PLPRKRSEASPHENTN 495
>gi|222537747 hypothetical protein LOC342979 [Homo sapiens]
Length = 673
Score = 70.5 bits (171), Expect = 2e-12
Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
Query: 6 AETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASE 65
AE++ ++RL+ IAEKR+ Q EI RR++E+E+ +++ LK K+LRERWL++G +
Sbjct: 2 AESSLYRQRLEVIAEKRRLQEEIRAARREVEEEKLRVERLKRKSLRERWLMDGAAAVPEP 61
Query: 66 GDEDLRRQMQDDE----QKTRLLEDSVSRLEKEIEVLE 99
++ + Q E + R LEDS+ L+ ++++L+
Sbjct: 62 SEDPTSKDPQSPEGQAQARIRNLEDSLFTLQSQLQLLQ 99
Score = 38.9 bits (89), Expect = 0.007
Identities = 51/183 (27%), Positives = 69/183 (37%), Gaps = 27/183 (14%)
Query: 182 PLSSSEVDELIHKADEVTLS---EAGSTAGAAETRGAVEGAARTTPSRREITGVQAQPGE 238
P ++ E E K E TL G + E EG RE G ++Q E
Sbjct: 497 PEATKEPLEAERKGGEETLEAEKRGGEESLETEKTQGTEGDLNLEQGSRE--GSESQAEE 554
Query: 239 AT-SGPP------------GIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDTITAELV 285
+GPP G QP QE PV + + AE + LG + AE
Sbjct: 555 MNEAGPPLEANTETRPEKEGPQP-QEKPVGALEEEGVKPQTAAEGQGPLGDATPLLAETP 613
Query: 286 VIEDAAEPKEPAPPNGSAAEP-----PTEAASREENQAGPEATTSDPQDLDMKKHRCKCC 340
E AE + G +A P PT A +R Q P A T + K+ C+CC
Sbjct: 614 APEQPAECQPLLQGEGPSANPSAHPVPTYAPAR---QPEPSAPTEGEEASGPKQKTCQCC 670
Query: 341 SIM 343
++M
Sbjct: 671 AVM 673
>gi|22035602 mitogen-activated protein kinase kinase kinase kinase 4
isoform 1 [Homo sapiens]
Length = 1166
Score = 55.8 bits (133), Expect = 5e-08
Identities = 77/355 (21%), Positives = 143/355 (40%), Gaps = 41/355 (11%)
Query: 2 EVLAAETTSQQE--RLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGT 59
++L + +QE + Q +AE++KR + + +RR+LE+++R+ + + + RE+ E
Sbjct: 374 QLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRRE-- 431
Query: 60 PSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERG---------------DSA 104
E+L R+ +++E++ R E+ R+E+E E + R
Sbjct: 432 -QEEKRRLEELERRRKEEEERRR-AEEEKRRVEREQEYIRRQLEEEQRHLEVLQQQLLQE 489
Query: 105 PATAKENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPM 164
A + P P + P P ++ER + P D R P+RT SP+
Sbjct: 490 QAMLLHDHRRPHPQHSQQPPPPQQERSKPSFHAPEPKAHYEPAD-RAREVPVRTTSRSPV 548
Query: 165 MKAVVHAVDGTAEN----GIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAA 220
+ + G+ + G +SS L+ + E + GS G+ G++
Sbjct: 549 LSRRDSPLQGSGQQNSQAGQRNSTSSIEPRLLWERVEKLVPRPGS--------GSSSGSS 600
Query: 221 RTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVL---GLQ 277
+ G Q+ GE + P + + ED+ E + L G
Sbjct: 601 NSGSQPGSHPGSQSGSGERFR-VRSSSKSEGSPSQRLENAVKKPEDKKEVFRPLKPAGEV 659
Query: 278 D--TITAELVVIEDAAEPKEPAPPNGSAAEP-PTEAASREENQAGPEATTSDPQD 329
D + EL +ED P + + S+ E T+ + Q G + +TS P+D
Sbjct: 660 DLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEDDDVEQEGADESTSGPED 714
>gi|187761324 shootin1 isoform a [Homo sapiens]
Length = 631
Score = 53.9 bits (128), Expect = 2e-07
Identities = 71/350 (20%), Positives = 129/350 (36%), Gaps = 51/350 (14%)
Query: 3 VLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQH-LKSKAL-RERWLLEGTP 60
+L + Q+ L+A+ E K ++E +R Q + + ++L+ L+++ L +E L+
Sbjct: 251 LLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQL 310
Query: 61 SSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRA 120
E ++L + Q+ E+K R L+ SV L+K + E P P P+
Sbjct: 311 ELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPP------PPPPPPLPP 364
Query: 121 PAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAENGI 180
P P+P R ++ + P G+ K + P T + + + + V + + G+
Sbjct: 365 PPPNPI---RSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKGV 421
Query: 181 HPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQPGEA- 239
H ++ K + S G + E +G + G + S R + + + E
Sbjct: 422 HLRPVNQTARPKTKPE----SSKGCESAVDELKG-ILGTLNKSTSSRSLKSLDPENSETE 476
Query: 240 ---------------TSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDTITAEL 284
+S P GI E + +V A KK L
Sbjct: 477 LERILRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTL---------- 526
Query: 285 VVIEDAAEPKEPAPPNGSAAEPPTEAASREENQAGPEATTSDPQDLDMKK 334
AE P+PP E P + E + T P + +K
Sbjct: 527 -----EAEFNSPSPPTPEPGEGPRKL----EGCTSSKVTFQPPSSIGCRK 567
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 53.5 bits (127), Expect = 3e-07
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 4 LAAETTSQQERL-QAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTP 60
L AE +QQ+ L QA AEK+K +AE E +RR +E+ RQ + + + ++R L EGT
Sbjct: 1646 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTA 1705
Query: 61 SSASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKEIEVLER------GDSAPATAKEN 111
+++ LR + + EQ+ +LLE+ ++RL++E + + A A+
Sbjct: 1706 QQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEME 1765
Query: 112 AAAPSPVRAPAPSPAKEERKTE 133
S RA S + E+ +
Sbjct: 1766 VLLASKARAEEESRSTSEKSKQ 1787
Score = 40.0 bits (92), Expect = 0.003
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLL-EG 58
MEVL A +E ++ +EK K++ E E R R+L +E +L+ L +A R+R L E
Sbjct: 1764 MEVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEED 1823
Query: 59 TPSSASEGDEDLRRQMQDDEQKTRL-LEDSVSRLEKEIE 96
+E + L ++ + TRL E ++ EKE E
Sbjct: 1824 AARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAE 1862
Score = 37.0 bits (84), Expect = 0.026
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 30/150 (20%)
Query: 6 AETTSQQER-----------LQAIAEKR-KRQAEIENKRRQLEDERRQLQHLKSKALRER 53
AE T+Q ER L+ AE+R ++QAE E R + E E + Q ++ALR R
Sbjct: 1586 AEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLR 1645
Query: 54 WLLEGTPSSAS-----------EGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGD 102
E S E + + RR+ + +EQ R E + LEK+ ++ E
Sbjct: 1646 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAE--- 1702
Query: 103 SAPATAKENAAAPSP-VRAPAPSPAKEERK 131
TA++ AA +R A + E+++
Sbjct: 1703 ---GTAQQRLAAEQELIRLRAETEQGEQQR 1729
Score = 37.0 bits (84), Expect = 0.026
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTPSS 62
A E + + QA AEK +++AE E RR ++ RQ Q ++ + + E T
Sbjct: 2121 AEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQ 2180
Query: 63 ASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKE 94
++ +++ LR Q+++ + + LL++ + RL+ E
Sbjct: 2181 KAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAE 2215
Score = 36.6 bits (83), Expect = 0.034
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLLEGTPSSA 63
A E +Q+ + Q AE+ +RQ + E++R RQ E E +++A RE+ A
Sbjct: 1482 AEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREK-------QRA 1534
Query: 64 SEGDEDLRRQMQDDEQKTRLLE-DSVSRLEKEIEVLERGDSAPATAKENAAA 114
+ E+LR Q ++ E++ R E + +++ +E +R A +K + A
Sbjct: 1535 LQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFA 1586
Score = 35.4 bits (80), Expect = 0.075
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 18 IAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDD 77
+A+ ++ + E + +++Q+E ER++L +A R + E E+L++ Q
Sbjct: 2524 VAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAE---EGVRRKQEELQQLEQQR 2580
Query: 78 EQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAA 114
Q+ LL + RL +++++LE A E A
Sbjct: 2581 RQQEELLAEENQRLREQLQLLEEQHRAALAHSEEVTA 2617
Score = 33.9 bits (76), Expect = 0.22
Identities = 73/355 (20%), Positives = 137/355 (38%), Gaps = 40/355 (11%)
Query: 2 EVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPS 61
E LAA + + + +A ++++AE E RR EDE Q + L+ +A + + +E +
Sbjct: 1837 EKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLA 1896
Query: 62 SASE-GDEDLRRQ---MQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSP 117
+ D +L RQ ++D ++ R +E+ + L+ E A A E
Sbjct: 1897 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFE------KAAAGKAELELELGR 1950
Query: 118 VRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAE 177
+R+ A + + + E+ ++Q + +++R R + K++ + +
Sbjct: 1951 IRSNAEDTLRSKEQAELEA-ARQRQLAAEEERRRREAEER------VQKSLAAEEEAARQ 2003
Query: 178 NGIHPLSSSEVDELIHKADEV-TLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQP 236
+ EV+ L K +E L E A + + A E A + + + Q
Sbjct: 2004 ---RKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ 2060
Query: 237 GEATSGPPGIQPGQEPPVTMIFMG----YQNVEDEAETKKVLGLQDTITAELVVIEDAAE 292
E +Q QE V G + +EAE +V ++ + V E+A
Sbjct: 2061 KEQEL-QQTLQ--QEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQV-EEAER 2116
Query: 293 PKEPAPPNGSAAEPPTEAASREENQAGPEAT-----------TSDPQDLDMKKHR 336
K+ A A AA + +A EA D +M+KH+
Sbjct: 2117 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHK 2171
Score = 31.2 bits (69), Expect = 1.4
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 2 EVLAAETTS-QQERLQAIAEKRKRQAEIENKRRQLE----DERRQLQHLKSKALRERWLL 56
E L ET + QQ L +R+ IE ++ +LE DE + Q L+ + R++ +
Sbjct: 2482 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQM 2541
Query: 57 EGTPSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKE 94
E E+ RR+ + E+ R ++ + +LE++
Sbjct: 2542 EQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQ 2579
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 53.5 bits (127), Expect = 3e-07
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 4 LAAETTSQQERL-QAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTP 60
L AE +QQ+ L QA AEK+K +AE E +RR +E+ RQ + + + ++R L EGT
Sbjct: 1650 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTA 1709
Query: 61 SSASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKEIEVLER------GDSAPATAKEN 111
+++ LR + + EQ+ +LLE+ ++RL++E + + A A+
Sbjct: 1710 QQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEME 1769
Query: 112 AAAPSPVRAPAPSPAKEERKTE 133
S RA S + E+ +
Sbjct: 1770 VLLASKARAEEESRSTSEKSKQ 1791
Score = 40.0 bits (92), Expect = 0.003
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLL-EG 58
MEVL A +E ++ +EK K++ E E R R+L +E +L+ L +A R+R L E
Sbjct: 1768 MEVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEED 1827
Query: 59 TPSSASEGDEDLRRQMQDDEQKTRL-LEDSVSRLEKEIE 96
+E + L ++ + TRL E ++ EKE E
Sbjct: 1828 AARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAE 1866
Score = 37.0 bits (84), Expect = 0.026
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 30/150 (20%)
Query: 6 AETTSQQER-----------LQAIAEKR-KRQAEIENKRRQLEDERRQLQHLKSKALRER 53
AE T+Q ER L+ AE+R ++QAE E R + E E + Q ++ALR R
Sbjct: 1590 AEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLR 1649
Query: 54 WLLEGTPSSAS-----------EGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGD 102
E S E + + RR+ + +EQ R E + LEK+ ++ E
Sbjct: 1650 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAE--- 1706
Query: 103 SAPATAKENAAAPSP-VRAPAPSPAKEERK 131
TA++ AA +R A + E+++
Sbjct: 1707 ---GTAQQRLAAEQELIRLRAETEQGEQQR 1733
Score = 37.0 bits (84), Expect = 0.026
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTPSS 62
A E + + QA AEK +++AE E RR ++ RQ Q ++ + + E T
Sbjct: 2125 AEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQ 2184
Query: 63 ASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKE 94
++ +++ LR Q+++ + + LL++ + RL+ E
Sbjct: 2185 KAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAE 2219
Score = 36.6 bits (83), Expect = 0.034
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLLEGTPSSA 63
A E +Q+ + Q AE+ +RQ + E++R RQ E E +++A RE+ A
Sbjct: 1486 AEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREK-------QRA 1538
Query: 64 SEGDEDLRRQMQDDEQKTRLLE-DSVSRLEKEIEVLERGDSAPATAKENAAA 114
+ E+LR Q ++ E++ R E + +++ +E +R A +K + A
Sbjct: 1539 LQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFA 1590
Score = 35.4 bits (80), Expect = 0.075
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 18 IAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDD 77
+A+ ++ + E + +++Q+E ER++L +A R + E E+L++ Q
Sbjct: 2528 VAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAE---EGVRRKQEELQQLEQQR 2584
Query: 78 EQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAA 114
Q+ LL + RL +++++LE A E A
Sbjct: 2585 RQQEELLAEENQRLREQLQLLEEQHRAALAHSEEVTA 2621
Score = 33.9 bits (76), Expect = 0.22
Identities = 73/355 (20%), Positives = 137/355 (38%), Gaps = 40/355 (11%)
Query: 2 EVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPS 61
E LAA + + + +A ++++AE E RR EDE Q + L+ +A + + +E +
Sbjct: 1841 EKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLA 1900
Query: 62 SASE-GDEDLRRQ---MQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSP 117
+ D +L RQ ++D ++ R +E+ + L+ E A A E
Sbjct: 1901 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFE------KAAAGKAELELELGR 1954
Query: 118 VRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAE 177
+R+ A + + + E+ ++Q + +++R R + K++ + +
Sbjct: 1955 IRSNAEDTLRSKEQAELEA-ARQRQLAAEEERRRREAEER------VQKSLAAEEEAARQ 2007
Query: 178 NGIHPLSSSEVDELIHKADEV-TLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQP 236
+ EV+ L K +E L E A + + A E A + + + Q
Sbjct: 2008 ---RKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ 2064
Query: 237 GEATSGPPGIQPGQEPPVTMIFMG----YQNVEDEAETKKVLGLQDTITAELVVIEDAAE 292
E +Q QE V G + +EAE +V ++ + V E+A
Sbjct: 2065 KEQEL-QQTLQ--QEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQV-EEAER 2120
Query: 293 PKEPAPPNGSAAEPPTEAASREENQAGPEAT-----------TSDPQDLDMKKHR 336
K+ A A AA + +A EA D +M+KH+
Sbjct: 2121 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHK 2175
Score = 31.2 bits (69), Expect = 1.4
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 2 EVLAAETTS-QQERLQAIAEKRKRQAEIENKRRQLE----DERRQLQHLKSKALRERWLL 56
E L ET + QQ L +R+ IE ++ +LE DE + Q L+ + R++ +
Sbjct: 2486 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQM 2545
Query: 57 EGTPSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKE 94
E E+ RR+ + E+ R ++ + +LE++
Sbjct: 2546 EQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQ 2583
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 53.5 bits (127), Expect = 3e-07
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 4 LAAETTSQQERL-QAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTP 60
L AE +QQ+ L QA AEK+K +AE E +RR +E+ RQ + + + ++R L EGT
Sbjct: 1646 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTA 1705
Query: 61 SSASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKEIEVLER------GDSAPATAKEN 111
+++ LR + + EQ+ +LLE+ ++RL++E + + A A+
Sbjct: 1706 QQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEME 1765
Query: 112 AAAPSPVRAPAPSPAKEERKTE 133
S RA S + E+ +
Sbjct: 1766 VLLASKARAEEESRSTSEKSKQ 1787
Score = 40.0 bits (92), Expect = 0.003
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLL-EG 58
MEVL A +E ++ +EK K++ E E R R+L +E +L+ L +A R+R L E
Sbjct: 1764 MEVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEED 1823
Query: 59 TPSSASEGDEDLRRQMQDDEQKTRL-LEDSVSRLEKEIE 96
+E + L ++ + TRL E ++ EKE E
Sbjct: 1824 AARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAE 1862
Score = 37.0 bits (84), Expect = 0.026
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 30/150 (20%)
Query: 6 AETTSQQER-----------LQAIAEKR-KRQAEIENKRRQLEDERRQLQHLKSKALRER 53
AE T+Q ER L+ AE+R ++QAE E R + E E + Q ++ALR R
Sbjct: 1586 AEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLR 1645
Query: 54 WLLEGTPSSAS-----------EGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGD 102
E S E + + RR+ + +EQ R E + LEK+ ++ E
Sbjct: 1646 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAE--- 1702
Query: 103 SAPATAKENAAAPSP-VRAPAPSPAKEERK 131
TA++ AA +R A + E+++
Sbjct: 1703 ---GTAQQRLAAEQELIRLRAETEQGEQQR 1729
Score = 37.0 bits (84), Expect = 0.026
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTPSS 62
A E + + QA AEK +++AE E RR ++ RQ Q ++ + + E T
Sbjct: 2121 AEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQ 2180
Query: 63 ASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKE 94
++ +++ LR Q+++ + + LL++ + RL+ E
Sbjct: 2181 KAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAE 2215
Score = 36.6 bits (83), Expect = 0.034
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLLEGTPSSA 63
A E +Q+ + Q AE+ +RQ + E++R RQ E E +++A RE+ A
Sbjct: 1482 AEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREK-------QRA 1534
Query: 64 SEGDEDLRRQMQDDEQKTRLLE-DSVSRLEKEIEVLERGDSAPATAKENAAA 114
+ E+LR Q ++ E++ R E + +++ +E +R A +K + A
Sbjct: 1535 LQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFA 1586
Score = 35.4 bits (80), Expect = 0.075
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 18 IAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDD 77
+A+ ++ + E + +++Q+E ER++L +A R + E E+L++ Q
Sbjct: 2524 VAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAE---EGVRRKQEELQQLEQQR 2580
Query: 78 EQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAA 114
Q+ LL + RL +++++LE A E A
Sbjct: 2581 RQQEELLAEENQRLREQLQLLEEQHRAALAHSEEVTA 2617
Score = 33.9 bits (76), Expect = 0.22
Identities = 73/355 (20%), Positives = 137/355 (38%), Gaps = 40/355 (11%)
Query: 2 EVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPS 61
E LAA + + + +A ++++AE E RR EDE Q + L+ +A + + +E +
Sbjct: 1837 EKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLA 1896
Query: 62 SASE-GDEDLRRQ---MQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSP 117
+ D +L RQ ++D ++ R +E+ + L+ E A A E
Sbjct: 1897 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFE------KAAAGKAELELELGR 1950
Query: 118 VRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAE 177
+R+ A + + + E+ ++Q + +++R R + K++ + +
Sbjct: 1951 IRSNAEDTLRSKEQAELEA-ARQRQLAAEEERRRREAEER------VQKSLAAEEEAARQ 2003
Query: 178 NGIHPLSSSEVDELIHKADEV-TLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQP 236
+ EV+ L K +E L E A + + A E A + + + Q
Sbjct: 2004 ---RKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ 2060
Query: 237 GEATSGPPGIQPGQEPPVTMIFMG----YQNVEDEAETKKVLGLQDTITAELVVIEDAAE 292
E +Q QE V G + +EAE +V ++ + V E+A
Sbjct: 2061 KEQEL-QQTLQ--QEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQV-EEAER 2116
Query: 293 PKEPAPPNGSAAEPPTEAASREENQAGPEAT-----------TSDPQDLDMKKHR 336
K+ A A AA + +A EA D +M+KH+
Sbjct: 2117 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHK 2171
Score = 31.2 bits (69), Expect = 1.4
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 2 EVLAAETTS-QQERLQAIAEKRKRQAEIENKRRQLE----DERRQLQHLKSKALRERWLL 56
E L ET + QQ L +R+ IE ++ +LE DE + Q L+ + R++ +
Sbjct: 2482 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQM 2541
Query: 57 EGTPSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKE 94
E E+ RR+ + E+ R ++ + +LE++
Sbjct: 2542 EQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQ 2579
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 53.5 bits (127), Expect = 3e-07
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 4 LAAETTSQQERL-QAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTP 60
L AE +QQ+ L QA AEK+K +AE E +RR +E+ RQ + + + ++R L EGT
Sbjct: 1614 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTA 1673
Query: 61 SSASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKEIEVLER------GDSAPATAKEN 111
+++ LR + + EQ+ +LLE+ ++RL++E + + A A+
Sbjct: 1674 QQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEME 1733
Query: 112 AAAPSPVRAPAPSPAKEERKTE 133
S RA S + E+ +
Sbjct: 1734 VLLASKARAEEESRSTSEKSKQ 1755
Score = 40.0 bits (92), Expect = 0.003
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLL-EG 58
MEVL A +E ++ +EK K++ E E R R+L +E +L+ L +A R+R L E
Sbjct: 1732 MEVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEED 1791
Query: 59 TPSSASEGDEDLRRQMQDDEQKTRL-LEDSVSRLEKEIE 96
+E + L ++ + TRL E ++ EKE E
Sbjct: 1792 AARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAE 1830
Score = 37.0 bits (84), Expect = 0.026
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 30/150 (20%)
Query: 6 AETTSQQER-----------LQAIAEKR-KRQAEIENKRRQLEDERRQLQHLKSKALRER 53
AE T+Q ER L+ AE+R ++QAE E R + E E + Q ++ALR R
Sbjct: 1554 AEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLR 1613
Query: 54 WLLEGTPSSAS-----------EGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGD 102
E S E + + RR+ + +EQ R E + LEK+ ++ E
Sbjct: 1614 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAE--- 1670
Query: 103 SAPATAKENAAAPSP-VRAPAPSPAKEERK 131
TA++ AA +R A + E+++
Sbjct: 1671 ---GTAQQRLAAEQELIRLRAETEQGEQQR 1697
Score = 37.0 bits (84), Expect = 0.026
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTPSS 62
A E + + QA AEK +++AE E RR ++ RQ Q ++ + + E T
Sbjct: 2089 AEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQ 2148
Query: 63 ASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKE 94
++ +++ LR Q+++ + + LL++ + RL+ E
Sbjct: 2149 KAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAE 2183
Score = 36.6 bits (83), Expect = 0.034
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLLEGTPSSA 63
A E +Q+ + Q AE+ +RQ + E++R RQ E E +++A RE+ A
Sbjct: 1450 AEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREK-------QRA 1502
Query: 64 SEGDEDLRRQMQDDEQKTRLLE-DSVSRLEKEIEVLERGDSAPATAKENAAA 114
+ E+LR Q ++ E++ R E + +++ +E +R A +K + A
Sbjct: 1503 LQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFA 1554
Score = 35.4 bits (80), Expect = 0.075
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 18 IAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDD 77
+A+ ++ + E + +++Q+E ER++L +A R + E E+L++ Q
Sbjct: 2492 VAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAE---EGVRRKQEELQQLEQQR 2548
Query: 78 EQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAA 114
Q+ LL + RL +++++LE A E A
Sbjct: 2549 RQQEELLAEENQRLREQLQLLEEQHRAALAHSEEVTA 2585
Score = 33.9 bits (76), Expect = 0.22
Identities = 73/355 (20%), Positives = 137/355 (38%), Gaps = 40/355 (11%)
Query: 2 EVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPS 61
E LAA + + + +A ++++AE E RR EDE Q + L+ +A + + +E +
Sbjct: 1805 EKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLA 1864
Query: 62 SASE-GDEDLRRQ---MQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSP 117
+ D +L RQ ++D ++ R +E+ + L+ E A A E
Sbjct: 1865 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFE------KAAAGKAELELELGR 1918
Query: 118 VRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAE 177
+R+ A + + + E+ ++Q + +++R R + K++ + +
Sbjct: 1919 IRSNAEDTLRSKEQAELEA-ARQRQLAAEEERRRREAEER------VQKSLAAEEEAARQ 1971
Query: 178 NGIHPLSSSEVDELIHKADEV-TLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQP 236
+ EV+ L K +E L E A + + A E A + + + Q
Sbjct: 1972 ---RKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ 2028
Query: 237 GEATSGPPGIQPGQEPPVTMIFMG----YQNVEDEAETKKVLGLQDTITAELVVIEDAAE 292
E +Q QE V G + +EAE +V ++ + V E+A
Sbjct: 2029 KEQEL-QQTLQ--QEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQV-EEAER 2084
Query: 293 PKEPAPPNGSAAEPPTEAASREENQAGPEAT-----------TSDPQDLDMKKHR 336
K+ A A AA + +A EA D +M+KH+
Sbjct: 2085 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHK 2139
Score = 31.2 bits (69), Expect = 1.4
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 2 EVLAAETTS-QQERLQAIAEKRKRQAEIENKRRQLE----DERRQLQHLKSKALRERWLL 56
E L ET + QQ L +R+ IE ++ +LE DE + Q L+ + R++ +
Sbjct: 2450 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQM 2509
Query: 57 EGTPSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKE 94
E E+ RR+ + E+ R ++ + +LE++
Sbjct: 2510 EQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQ 2547
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 53.5 bits (127), Expect = 3e-07
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 4 LAAETTSQQERL-QAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTP 60
L AE +QQ+ L QA AEK+K +AE E +RR +E+ RQ + + + ++R L EGT
Sbjct: 1783 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTA 1842
Query: 61 SSASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKEIEVLER------GDSAPATAKEN 111
+++ LR + + EQ+ +LLE+ ++RL++E + + A A+
Sbjct: 1843 QQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEME 1902
Query: 112 AAAPSPVRAPAPSPAKEERKTE 133
S RA S + E+ +
Sbjct: 1903 VLLASKARAEEESRSTSEKSKQ 1924
Score = 40.0 bits (92), Expect = 0.003
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLL-EG 58
MEVL A +E ++ +EK K++ E E R R+L +E +L+ L +A R+R L E
Sbjct: 1901 MEVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEED 1960
Query: 59 TPSSASEGDEDLRRQMQDDEQKTRL-LEDSVSRLEKEIE 96
+E + L ++ + TRL E ++ EKE E
Sbjct: 1961 AARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAE 1999
Score = 37.0 bits (84), Expect = 0.026
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 30/150 (20%)
Query: 6 AETTSQQER-----------LQAIAEKR-KRQAEIENKRRQLEDERRQLQHLKSKALRER 53
AE T+Q ER L+ AE+R ++QAE E R + E E + Q ++ALR R
Sbjct: 1723 AEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLR 1782
Query: 54 WLLEGTPSSAS-----------EGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGD 102
E S E + + RR+ + +EQ R E + LEK+ ++ E
Sbjct: 1783 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAE--- 1839
Query: 103 SAPATAKENAAAPSP-VRAPAPSPAKEERK 131
TA++ AA +R A + E+++
Sbjct: 1840 ---GTAQQRLAAEQELIRLRAETEQGEQQR 1866
Score = 37.0 bits (84), Expect = 0.026
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTPSS 62
A E + + QA AEK +++AE E RR ++ RQ Q ++ + + E T
Sbjct: 2258 AEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQ 2317
Query: 63 ASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKE 94
++ +++ LR Q+++ + + LL++ + RL+ E
Sbjct: 2318 KAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAE 2352
Score = 36.6 bits (83), Expect = 0.034
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLLEGTPSSA 63
A E +Q+ + Q AE+ +RQ + E++R RQ E E +++A RE+ A
Sbjct: 1619 AEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREK-------QRA 1671
Query: 64 SEGDEDLRRQMQDDEQKTRLLE-DSVSRLEKEIEVLERGDSAPATAKENAAA 114
+ E+LR Q ++ E++ R E + +++ +E +R A +K + A
Sbjct: 1672 LQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFA 1723
Score = 35.4 bits (80), Expect = 0.075
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 18 IAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDD 77
+A+ ++ + E + +++Q+E ER++L +A R + E E+L++ Q
Sbjct: 2661 VAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAE---EGVRRKQEELQQLEQQR 2717
Query: 78 EQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAA 114
Q+ LL + RL +++++LE A E A
Sbjct: 2718 RQQEELLAEENQRLREQLQLLEEQHRAALAHSEEVTA 2754
Score = 33.9 bits (76), Expect = 0.22
Identities = 73/355 (20%), Positives = 137/355 (38%), Gaps = 40/355 (11%)
Query: 2 EVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPS 61
E LAA + + + +A ++++AE E RR EDE Q + L+ +A + + +E +
Sbjct: 1974 EKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLA 2033
Query: 62 SASE-GDEDLRRQ---MQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSP 117
+ D +L RQ ++D ++ R +E+ + L+ E A A E
Sbjct: 2034 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFE------KAAAGKAELELELGR 2087
Query: 118 VRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAE 177
+R+ A + + + E+ ++Q + +++R R + K++ + +
Sbjct: 2088 IRSNAEDTLRSKEQAELEA-ARQRQLAAEEERRRREAEER------VQKSLAAEEEAARQ 2140
Query: 178 NGIHPLSSSEVDELIHKADEV-TLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQP 236
+ EV+ L K +E L E A + + A E A + + + Q
Sbjct: 2141 ---RKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ 2197
Query: 237 GEATSGPPGIQPGQEPPVTMIFMG----YQNVEDEAETKKVLGLQDTITAELVVIEDAAE 292
E +Q QE V G + +EAE +V ++ + V E+A
Sbjct: 2198 KEQEL-QQTLQ--QEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQV-EEAER 2253
Query: 293 PKEPAPPNGSAAEPPTEAASREENQAGPEAT-----------TSDPQDLDMKKHR 336
K+ A A AA + +A EA D +M+KH+
Sbjct: 2254 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHK 2308
Score = 31.2 bits (69), Expect = 1.4
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 2 EVLAAETTS-QQERLQAIAEKRKRQAEIENKRRQLE----DERRQLQHLKSKALRERWLL 56
E L ET + QQ L +R+ IE ++ +LE DE + Q L+ + R++ +
Sbjct: 2619 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQM 2678
Query: 57 EGTPSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKE 94
E E+ RR+ + E+ R ++ + +LE++
Sbjct: 2679 EQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQ 2716
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 53.5 bits (127), Expect = 3e-07
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 4 LAAETTSQQERL-QAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTP 60
L AE +QQ+ L QA AEK+K +AE E +RR +E+ RQ + + + ++R L EGT
Sbjct: 1624 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTA 1683
Query: 61 SSASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKEIEVLER------GDSAPATAKEN 111
+++ LR + + EQ+ +LLE+ ++RL++E + + A A+
Sbjct: 1684 QQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEME 1743
Query: 112 AAAPSPVRAPAPSPAKEERKTE 133
S RA S + E+ +
Sbjct: 1744 VLLASKARAEEESRSTSEKSKQ 1765
Score = 40.0 bits (92), Expect = 0.003
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLL-EG 58
MEVL A +E ++ +EK K++ E E R R+L +E +L+ L +A R+R L E
Sbjct: 1742 MEVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEED 1801
Query: 59 TPSSASEGDEDLRRQMQDDEQKTRL-LEDSVSRLEKEIE 96
+E + L ++ + TRL E ++ EKE E
Sbjct: 1802 AARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAE 1840
Score = 37.0 bits (84), Expect = 0.026
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 30/150 (20%)
Query: 6 AETTSQQER-----------LQAIAEKR-KRQAEIENKRRQLEDERRQLQHLKSKALRER 53
AE T+Q ER L+ AE+R ++QAE E R + E E + Q ++ALR R
Sbjct: 1564 AEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLR 1623
Query: 54 WLLEGTPSSAS-----------EGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGD 102
E S E + + RR+ + +EQ R E + LEK+ ++ E
Sbjct: 1624 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAE--- 1680
Query: 103 SAPATAKENAAAPSP-VRAPAPSPAKEERK 131
TA++ AA +R A + E+++
Sbjct: 1681 ---GTAQQRLAAEQELIRLRAETEQGEQQR 1707
Score = 37.0 bits (84), Expect = 0.026
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTPSS 62
A E + + QA AEK +++AE E RR ++ RQ Q ++ + + E T
Sbjct: 2099 AEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQ 2158
Query: 63 ASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKE 94
++ +++ LR Q+++ + + LL++ + RL+ E
Sbjct: 2159 KAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAE 2193
Score = 36.6 bits (83), Expect = 0.034
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLLEGTPSSA 63
A E +Q+ + Q AE+ +RQ + E++R RQ E E +++A RE+ A
Sbjct: 1460 AEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREK-------QRA 1512
Query: 64 SEGDEDLRRQMQDDEQKTRLLE-DSVSRLEKEIEVLERGDSAPATAKENAAA 114
+ E+LR Q ++ E++ R E + +++ +E +R A +K + A
Sbjct: 1513 LQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFA 1564
Score = 35.4 bits (80), Expect = 0.075
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 18 IAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDD 77
+A+ ++ + E + +++Q+E ER++L +A R + E E+L++ Q
Sbjct: 2502 VAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAE---EGVRRKQEELQQLEQQR 2558
Query: 78 EQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAA 114
Q+ LL + RL +++++LE A E A
Sbjct: 2559 RQQEELLAEENQRLREQLQLLEEQHRAALAHSEEVTA 2595
Score = 33.9 bits (76), Expect = 0.22
Identities = 73/355 (20%), Positives = 137/355 (38%), Gaps = 40/355 (11%)
Query: 2 EVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPS 61
E LAA + + + +A ++++AE E RR EDE Q + L+ +A + + +E +
Sbjct: 1815 EKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLA 1874
Query: 62 SASE-GDEDLRRQ---MQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSP 117
+ D +L RQ ++D ++ R +E+ + L+ E A A E
Sbjct: 1875 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFE------KAAAGKAELELELGR 1928
Query: 118 VRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAE 177
+R+ A + + + E+ ++Q + +++R R + K++ + +
Sbjct: 1929 IRSNAEDTLRSKEQAELEA-ARQRQLAAEEERRRREAEER------VQKSLAAEEEAARQ 1981
Query: 178 NGIHPLSSSEVDELIHKADEV-TLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQP 236
+ EV+ L K +E L E A + + A E A + + + Q
Sbjct: 1982 ---RKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ 2038
Query: 237 GEATSGPPGIQPGQEPPVTMIFMG----YQNVEDEAETKKVLGLQDTITAELVVIEDAAE 292
E +Q QE V G + +EAE +V ++ + V E+A
Sbjct: 2039 KEQEL-QQTLQ--QEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQV-EEAER 2094
Query: 293 PKEPAPPNGSAAEPPTEAASREENQAGPEAT-----------TSDPQDLDMKKHR 336
K+ A A AA + +A EA D +M+KH+
Sbjct: 2095 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHK 2149
Score = 31.2 bits (69), Expect = 1.4
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 2 EVLAAETTS-QQERLQAIAEKRKRQAEIENKRRQLE----DERRQLQHLKSKALRERWLL 56
E L ET + QQ L +R+ IE ++ +LE DE + Q L+ + R++ +
Sbjct: 2460 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQM 2519
Query: 57 EGTPSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKE 94
E E+ RR+ + E+ R ++ + +LE++
Sbjct: 2520 EQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQ 2557
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 53.5 bits (127), Expect = 3e-07
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 4 LAAETTSQQERL-QAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTP 60
L AE +QQ+ L QA AEK+K +AE E +RR +E+ RQ + + + ++R L EGT
Sbjct: 1632 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTA 1691
Query: 61 SSASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKEIEVLER------GDSAPATAKEN 111
+++ LR + + EQ+ +LLE+ ++RL++E + + A A+
Sbjct: 1692 QQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEME 1751
Query: 112 AAAPSPVRAPAPSPAKEERKTE 133
S RA S + E+ +
Sbjct: 1752 VLLASKARAEEESRSTSEKSKQ 1773
Score = 40.0 bits (92), Expect = 0.003
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLL-EG 58
MEVL A +E ++ +EK K++ E E R R+L +E +L+ L +A R+R L E
Sbjct: 1750 MEVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEED 1809
Query: 59 TPSSASEGDEDLRRQMQDDEQKTRL-LEDSVSRLEKEIE 96
+E + L ++ + TRL E ++ EKE E
Sbjct: 1810 AARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAE 1848
Score = 37.0 bits (84), Expect = 0.026
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 30/150 (20%)
Query: 6 AETTSQQER-----------LQAIAEKR-KRQAEIENKRRQLEDERRQLQHLKSKALRER 53
AE T+Q ER L+ AE+R ++QAE E R + E E + Q ++ALR R
Sbjct: 1572 AEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLR 1631
Query: 54 WLLEGTPSSAS-----------EGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGD 102
E S E + + RR+ + +EQ R E + LEK+ ++ E
Sbjct: 1632 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAE--- 1688
Query: 103 SAPATAKENAAAPSP-VRAPAPSPAKEERK 131
TA++ AA +R A + E+++
Sbjct: 1689 ---GTAQQRLAAEQELIRLRAETEQGEQQR 1715
Score = 37.0 bits (84), Expect = 0.026
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTPSS 62
A E + + QA AEK +++AE E RR ++ RQ Q ++ + + E T
Sbjct: 2107 AEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQ 2166
Query: 63 ASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKE 94
++ +++ LR Q+++ + + LL++ + RL+ E
Sbjct: 2167 KAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAE 2201
Score = 36.6 bits (83), Expect = 0.034
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLLEGTPSSA 63
A E +Q+ + Q AE+ +RQ + E++R RQ E E +++A RE+ A
Sbjct: 1468 AEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREK-------QRA 1520
Query: 64 SEGDEDLRRQMQDDEQKTRLLE-DSVSRLEKEIEVLERGDSAPATAKENAAA 114
+ E+LR Q ++ E++ R E + +++ +E +R A +K + A
Sbjct: 1521 LQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFA 1572
Score = 35.4 bits (80), Expect = 0.075
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 18 IAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDD 77
+A+ ++ + E + +++Q+E ER++L +A R + E E+L++ Q
Sbjct: 2510 VAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAE---EGVRRKQEELQQLEQQR 2566
Query: 78 EQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAA 114
Q+ LL + RL +++++LE A E A
Sbjct: 2567 RQQEELLAEENQRLREQLQLLEEQHRAALAHSEEVTA 2603
Score = 33.9 bits (76), Expect = 0.22
Identities = 73/355 (20%), Positives = 137/355 (38%), Gaps = 40/355 (11%)
Query: 2 EVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPS 61
E LAA + + + +A ++++AE E RR EDE Q + L+ +A + + +E +
Sbjct: 1823 EKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLA 1882
Query: 62 SASE-GDEDLRRQ---MQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSP 117
+ D +L RQ ++D ++ R +E+ + L+ E A A E
Sbjct: 1883 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFE------KAAAGKAELELELGR 1936
Query: 118 VRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAE 177
+R+ A + + + E+ ++Q + +++R R + K++ + +
Sbjct: 1937 IRSNAEDTLRSKEQAELEA-ARQRQLAAEEERRRREAEER------VQKSLAAEEEAARQ 1989
Query: 178 NGIHPLSSSEVDELIHKADEV-TLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQP 236
+ EV+ L K +E L E A + + A E A + + + Q
Sbjct: 1990 ---RKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ 2046
Query: 237 GEATSGPPGIQPGQEPPVTMIFMG----YQNVEDEAETKKVLGLQDTITAELVVIEDAAE 292
E +Q QE V G + +EAE +V ++ + V E+A
Sbjct: 2047 KEQEL-QQTLQ--QEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQV-EEAER 2102
Query: 293 PKEPAPPNGSAAEPPTEAASREENQAGPEAT-----------TSDPQDLDMKKHR 336
K+ A A AA + +A EA D +M+KH+
Sbjct: 2103 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHK 2157
Score = 31.2 bits (69), Expect = 1.4
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 2 EVLAAETTS-QQERLQAIAEKRKRQAEIENKRRQLE----DERRQLQHLKSKALRERWLL 56
E L ET + QQ L +R+ IE ++ +LE DE + Q L+ + R++ +
Sbjct: 2468 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQM 2527
Query: 57 EGTPSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKE 94
E E+ RR+ + E+ R ++ + +LE++
Sbjct: 2528 EQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQ 2565
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 53.5 bits (127), Expect = 3e-07
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 4 LAAETTSQQERL-QAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTP 60
L AE +QQ+ L QA AEK+K +AE E +RR +E+ RQ + + + ++R L EGT
Sbjct: 1673 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTA 1732
Query: 61 SSASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKEIEVLER------GDSAPATAKEN 111
+++ LR + + EQ+ +LLE+ ++RL++E + + A A+
Sbjct: 1733 QQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEME 1792
Query: 112 AAAPSPVRAPAPSPAKEERKTE 133
S RA S + E+ +
Sbjct: 1793 VLLASKARAEEESRSTSEKSKQ 1814
Score = 40.0 bits (92), Expect = 0.003
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLL-EG 58
MEVL A +E ++ +EK K++ E E R R+L +E +L+ L +A R+R L E
Sbjct: 1791 MEVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEED 1850
Query: 59 TPSSASEGDEDLRRQMQDDEQKTRL-LEDSVSRLEKEIE 96
+E + L ++ + TRL E ++ EKE E
Sbjct: 1851 AARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAE 1889
Score = 37.0 bits (84), Expect = 0.026
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 30/150 (20%)
Query: 6 AETTSQQER-----------LQAIAEKR-KRQAEIENKRRQLEDERRQLQHLKSKALRER 53
AE T+Q ER L+ AE+R ++QAE E R + E E + Q ++ALR R
Sbjct: 1613 AEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLR 1672
Query: 54 WLLEGTPSSAS-----------EGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGD 102
E S E + + RR+ + +EQ R E + LEK+ ++ E
Sbjct: 1673 LQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAE--- 1729
Query: 103 SAPATAKENAAAPSP-VRAPAPSPAKEERK 131
TA++ AA +R A + E+++
Sbjct: 1730 ---GTAQQRLAAEQELIRLRAETEQGEQQR 1756
Score = 37.0 bits (84), Expect = 0.026
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKRRQLEDER--RQLQHLKSKALRERWLLEGTPSS 62
A E + + QA AEK +++AE E RR ++ RQ Q ++ + + E T
Sbjct: 2148 AEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQ 2207
Query: 63 ASEGDED---LRRQMQDDEQKTRLLEDSVSRLEKE 94
++ +++ LR Q+++ + + LL++ + RL+ E
Sbjct: 2208 KAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAE 2242
Score = 36.6 bits (83), Expect = 0.034
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 5 AAETTSQQERLQAIAEKRKRQAEIENKR-RQLEDERRQLQHLKSKALRERWLLEGTPSSA 63
A E +Q+ + Q AE+ +RQ + E++R RQ E E +++A RE+ A
Sbjct: 1509 AEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREK-------QRA 1561
Query: 64 SEGDEDLRRQMQDDEQKTRLLE-DSVSRLEKEIEVLERGDSAPATAKENAAA 114
+ E+LR Q ++ E++ R E + +++ +E +R A +K + A
Sbjct: 1562 LQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFA 1613
Score = 35.4 bits (80), Expect = 0.075
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 18 IAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDD 77
+A+ ++ + E + +++Q+E ER++L +A R + E E+L++ Q
Sbjct: 2551 VAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAE---EGVRRKQEELQQLEQQR 2607
Query: 78 EQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAA 114
Q+ LL + RL +++++LE A E A
Sbjct: 2608 RQQEELLAEENQRLREQLQLLEEQHRAALAHSEEVTA 2644
Score = 33.9 bits (76), Expect = 0.22
Identities = 73/355 (20%), Positives = 137/355 (38%), Gaps = 40/355 (11%)
Query: 2 EVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPS 61
E LAA + + + +A ++++AE E RR EDE Q + L+ +A + + +E +
Sbjct: 1864 EKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLA 1923
Query: 62 SASE-GDEDLRRQ---MQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSP 117
+ D +L RQ ++D ++ R +E+ + L+ E A A E
Sbjct: 1924 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFE------KAAAGKAELELELGR 1977
Query: 118 VRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAE 177
+R+ A + + + E+ ++Q + +++R R + K++ + +
Sbjct: 1978 IRSNAEDTLRSKEQAELEA-ARQRQLAAEEERRRREAEER------VQKSLAAEEEAARQ 2030
Query: 178 NGIHPLSSSEVDELIHKADEV-TLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQP 236
+ EV+ L K +E L E A + + A E A + + + Q
Sbjct: 2031 ---RKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ 2087
Query: 237 GEATSGPPGIQPGQEPPVTMIFMG----YQNVEDEAETKKVLGLQDTITAELVVIEDAAE 292
E +Q QE V G + +EAE +V ++ + V E+A
Sbjct: 2088 KEQEL-QQTLQ--QEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQV-EEAER 2143
Query: 293 PKEPAPPNGSAAEPPTEAASREENQAGPEAT-----------TSDPQDLDMKKHR 336
K+ A A AA + +A EA D +M+KH+
Sbjct: 2144 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHK 2198
Score = 31.2 bits (69), Expect = 1.4
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 2 EVLAAETTS-QQERLQAIAEKRKRQAEIENKRRQLE----DERRQLQHLKSKALRERWLL 56
E L ET + QQ L +R+ IE ++ +LE DE + Q L+ + R++ +
Sbjct: 2509 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQM 2568
Query: 57 EGTPSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKE 94
E E+ RR+ + E+ R ++ + +LE++
Sbjct: 2569 EQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQ 2606
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 53.5 bits (127), Expect = 3e-07
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 28/279 (10%)
Query: 6 AETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASE 65
A TT ++E + +AEKR++ E +R+ E++ R+LQ + K +RE L + A
Sbjct: 591 AGTTDREEATRLLAEKRRQARE----QREREEQERRLQAERDKRMREEQLAREAEARAER 646
Query: 66 GDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRAPAPSP 125
E RR+ Q+ +K + ++ RL+K+ E E A + +
Sbjct: 647 EAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQQQEQERQ 706
Query: 126 AKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAENGIHPLSS 185
+ +R E++ ++++ V K K+ S +KAV G + +
Sbjct: 707 ERRKRLEEIMKRTRKSEVSETKQKQDSKEANANGSSPEPVKAVEARSPGLQKEAV----- 761
Query: 186 SEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTTPSRREITGVQAQPGEATSGPPG 245
+ +E E + + E ++ + P+ +E G +T+GP G
Sbjct: 762 --------QKEEPIPQEPQWSLPSKELPASLVNGLQPLPAHQE-------NGFSTNGPSG 806
Query: 246 IQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDTITAEL 284
+ P T++ E EA KK + +T L
Sbjct: 807 DKSLSRTPETLL----PFAEAEAFLKKAVVQSPQVTEVL 841
Score = 33.5 bits (75), Expect = 0.28
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 109 KENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTP 155
KE+AA SP +PAPSP T +Q P TP D V +P
Sbjct: 537 KESAAPASPAPSPAPSP------TPAPPQKEQPPAETPTDAAVLTSP 577
Score = 28.9 bits (63), Expect = 7.0
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 293 PKEPAPPNGSAAEPPTEAASREENQAGPEATTSDPQDLDMKKHR 336
P +P P G+ A P +EE + P A + P+D K R
Sbjct: 491 PPKPPSPRGTTASPKGRVRRKEEAKESPSA--AGPEDKSQSKRR 532
>gi|22035606 mitogen-activated protein kinase kinase kinase kinase 4
isoform 3 [Homo sapiens]
Length = 1212
Score = 51.2 bits (121), Expect = 1e-06
Identities = 79/349 (22%), Positives = 137/349 (39%), Gaps = 38/349 (10%)
Query: 1 MEVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLL---- 56
+E L ++ER +A EKR+ + E E RRQLE+E+R L+ L+ + L+E+ +L
Sbjct: 438 LEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEVLQQQLLQEQAMLLHDH 497
Query: 57 -----EGTPSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAP-ATAKE 110
+ + E + E K E + E E + S+P A +K+
Sbjct: 498 RRPHPQHSQQPPPPQQERSKPSFHAPEPKAH-YEPADRAREVEDRFRKTNHSSPEAQSKQ 556
Query: 111 NAAAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVH 170
P P P++ E + S + P + +V P+RT SP++
Sbjct: 557 TGRVLEP-----PVPSRSESFSNGNSESVHPALQRPAEPQV---PVRTTSRSPVLSRRDS 608
Query: 171 AVDGTAEN----GIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTTPSR 226
+ G+ + G +SS L+ + E + GS G+ G++ +
Sbjct: 609 PLQGSGQQNSQAGQRNSTSSIEPRLLWERVEKLVPRPGS--------GSSSGSSNSGSQP 660
Query: 227 REITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVL---GLQD--TIT 281
G Q+ GE + P + + ED+ E + L G D +
Sbjct: 661 GSHPGSQSGSGERFR-VRSSSKSEGSPSQRLENAVKKPEDKKEVFRPLKPAGEVDLTALA 719
Query: 282 AELVVIEDAAEPKEPAPPNGSAAEP-PTEAASREENQAGPEATTSDPQD 329
EL +ED P + + S+ E T+ + Q G + +TS P+D
Sbjct: 720 KELRAVEDVRPPHKVTDYSSSSEESGTTDEEDDDVEQEGADESTSGPED 768
>gi|50511340 shootin1 isoform b [Homo sapiens]
Length = 456
Score = 49.3 bits (116), Expect = 5e-06
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 11/181 (6%)
Query: 3 VLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQH-LKSKAL-RERWLLEGTP 60
+L + Q+ L+A+ E K ++E +R Q + + ++L+ L+++ L +E L+
Sbjct: 251 LLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQL 310
Query: 61 SSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRA 120
E ++L + Q+ E+K R L+ SV L+K + E P P P+
Sbjct: 311 ELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPP------PPPPPPLPP 364
Query: 121 PAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAVVHAVDGTAENGI 180
P P+P R ++ + P G+ K + P T + + + + V + + G+
Sbjct: 365 PPPNPI---RSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKGV 421
Query: 181 H 181
H
Sbjct: 422 H 422
>gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo
sapiens]
Length = 528
Score = 47.0 bits (110), Expect = 2e-05
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 21/127 (16%)
Query: 11 QQERLQAIAEKRKRQAE-----IENKRRQLEDERRQLQHLKSK---ALRERWLLEGTPSS 62
++ERLQ EKR+R+ E E +RR++E+ER +L+ K + AL + ++ +
Sbjct: 203 ERERLQKEEEKRRREEEERLRREEEERRRIEEERLRLEQQKQQIMAALNSQTAVQFQQYA 262
Query: 63 AS------EGDEDLRRQMQDDEQKTRL-------LEDSVSRLEKEIEVLERGDSAPATAK 109
A E + L RQ+Q+ + + L + L+K+ EV+ G S P ++K
Sbjct: 263 AQQYPGNYEQQQILIRQLQEQHYQQYMQQLYQVQLAQQQAALQKQQEVVVAGSSLPTSSK 322
Query: 110 ENAAAPS 116
NA PS
Sbjct: 323 VNATVPS 329
Score = 35.0 bits (79), Expect = 0.098
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 17/75 (22%)
Query: 20 EKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDDEQ 79
E+ K++ E E +RR+ E+ER +LQ + K RE +E LRR +E+
Sbjct: 185 EQEKKRKEEEERRRREEEERERLQKEEEKRRREE-------------EERLRR----EEE 227
Query: 80 KTRLLEDSVSRLEKE 94
+ R +E+ RLE++
Sbjct: 228 ERRRIEEERLRLEQQ 242
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 46.6 bits (109), Expect = 3e-05
Identities = 58/245 (23%), Positives = 87/245 (35%), Gaps = 21/245 (8%)
Query: 102 DSAPATAKENA------AAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTP 155
+ AP T KE A AP+ ++ PAP+ K+ E+ + + P T DK TP
Sbjct: 561 EPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP 620
Query: 156 LRTVDGSPMMKAVVHAVD--GTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETR 213
T +P A + T G P + E K + E T T
Sbjct: 621 KGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK--KPAPKELAPTTTKGPTS 678
Query: 214 GAVEGAARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKV 273
+ A TTP T +P T P + PP T + E T
Sbjct: 679 TTSDKPAPTTPKETAPT-TPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHK 737
Query: 274 LGLQDT--ITAELVVIEDAAEPKEPAPP---NGSAAEPPTEAASREEN-----QAGPEAT 323
+ T ++AE PKEP P +A +P ++++ + PE T
Sbjct: 738 SPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETT 797
Query: 324 TSDPQ 328
T+ P+
Sbjct: 798 TAAPK 802
Score = 41.6 bits (96), Expect = 0.001
Identities = 57/227 (25%), Positives = 72/227 (31%), Gaps = 23/227 (10%)
Query: 103 SAPATAKENAAAPSPVRAPAPSPAKEERKT---EVVMNSQQTPVGTPKDKRVSNTPLRTV 159
SAP T KE AP+ + PAP+ KE T E + ++ TPK+ TP +
Sbjct: 254 SAPTTPKE--PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP-APTTPKKPA 310
Query: 160 DGSPMMKAVVHAVDGTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGA 219
+P A P + E K T E T A +
Sbjct: 311 PTTPKEPA--------------PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKP 356
Query: 220 ARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDT 279
A TTP T + T P P + P T E T K
Sbjct: 357 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK 416
Query: 280 ITAELVVIEDA-AEPKEPAP--PNGSAAEPPTEAASREENQAGPEAT 323
+ E A PKEPAP P A P E A + P T
Sbjct: 417 EPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTT 463
Score = 35.0 bits (79), Expect = 0.098
Identities = 63/244 (25%), Positives = 85/244 (34%), Gaps = 29/244 (11%)
Query: 102 DSAPATAKENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTP---VGTPKDKRVSNTPLRT 158
+ AP T KE AP+ + PAP+ KE T + TP T +K TP +
Sbjct: 449 EPAPTTPKE--PAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKP 506
Query: 159 VDGSPMMKAVVHAVDGTAENGIHPLSSSEVDELIHKADE---VTLSEAGSTAGAAETRGA 215
+P A + T P ++ + E T E T
Sbjct: 507 APTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 566
Query: 216 VEGAARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLG 275
+ A TTP T ++ +P T P P + P T + A T G
Sbjct: 567 PKETAPTTPKGTAPTTLK-EPAPTTPKKPA--PKELAPTTTKEPTSTTCDKPAPTTP-KG 622
Query: 276 LQDTITAELVVIEDAAEPKEPAP--PNGSA----AEP----PTEAASRE---ENQAGPEA 322
T E PKEPAP P G+A EP P + A +E GP +
Sbjct: 623 TAPTTPKE----PAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTS 678
Query: 323 TTSD 326
TTSD
Sbjct: 679 TTSD 682
Score = 34.3 bits (77), Expect = 0.17
Identities = 58/228 (25%), Positives = 73/228 (32%), Gaps = 30/228 (13%)
Query: 105 PATAKENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPM 164
PA AAAP+ + PAP+ KE T TPK+ TP T +P
Sbjct: 530 PAPTTPKAAAPNTPKEPAPTTPKEPAPT------------TPKEP-APTTPKETAPTTP- 575
Query: 165 MKAVVHAVDGTAENGI-HPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTT 223
GTA + P ++ + T E ST +G A TT
Sbjct: 576 --------KGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 627
Query: 224 PSRREITGVQAQPGEATSGPPGIQPG--QEPPVTMIFMGYQNVEDEAETKKVLGLQDTIT 281
P T +P T P G P +EP T TK
Sbjct: 628 PKEPAPT-TPKEPAPTT--PKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKP 684
Query: 282 AELVVIEDA-AEPKEPAPPNGSAAEPPT-EAASREENQAGPEATTSDP 327
A E A PKEPAP P T E ++ TT +P
Sbjct: 685 APTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEP 732
Score = 31.2 bits (69), Expect = 1.4
Identities = 52/232 (22%), Positives = 74/232 (31%), Gaps = 28/232 (12%)
Query: 102 DSAPATAKENAA------APSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTP 155
+ AP T KE A AP+ + PAP+ KE T + + P T + TP
Sbjct: 425 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT-----TTKKPAPTTPKEPAPTTP 479
Query: 156 LRTVDGSPMMKAVVHAVDGTAENGIHPLSSSEVDELIHKADE----VTLSEAGSTAGAAE 211
T +P K + A + + +EL E T E T A
Sbjct: 480 KETAPTTP-KKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAA 538
Query: 212 TRGAVEGAARTTPSRREITGVQAQPGEATSGPPG-IQPGQEPPVTMIFMGYQNVEDEAET 270
+ A TTP +P T P P + P T +++ A T
Sbjct: 539 APNTPKEPAPTTPK---------EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPT 589
Query: 271 --KKVLGLQDTITAELVVIEDAAEPKEPAPPNGSAAEPPTEAASREENQAGP 320
KK + T + P P G+A P E A + P
Sbjct: 590 TPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 641
Score = 28.5 bits (62), Expect = 9.1
Identities = 49/229 (21%), Positives = 83/229 (36%), Gaps = 15/229 (6%)
Query: 109 KENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAV 168
K A P R P + ++T + +N ++T V T K+ +N T DG +
Sbjct: 117 KITTAKPINPRPSLPPNSDTSKETSLTVN-KETTVET-KETTTTNKQTST-DGKEKTTSA 173
Query: 169 --VHAVDGTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTTPSR 226
+++ T+ + P +S + + KA+ T A +T T + A TTP
Sbjct: 174 KETQSIEKTSAKDLAP-TSKVLAKPTPKAETTTKGPALTTP-KEPTPTTPKEPASTTPKE 231
Query: 227 REITGVQA------QPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDTI 280
T +++ +P T+ P + P T ++ A T T
Sbjct: 232 PTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT 291
Query: 281 TAELVVIEDAAE--PKEPAPPNGSAAEPPTEAASREENQAGPEATTSDP 327
+ ++ A PK+PAP P T P TT +P
Sbjct: 292 KSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEP 340
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 46.6 bits (109), Expect = 3e-05
Identities = 58/245 (23%), Positives = 87/245 (35%), Gaps = 21/245 (8%)
Query: 102 DSAPATAKENA------AAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTP 155
+ AP T KE A AP+ ++ PAP+ K+ E+ + + P T DK TP
Sbjct: 602 EPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP 661
Query: 156 LRTVDGSPMMKAVVHAVD--GTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETR 213
T +P A + T G P + E K + E T T
Sbjct: 662 KGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK--KPAPKELAPTTTKGPTS 719
Query: 214 GAVEGAARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKV 273
+ A TTP T +P T P + PP T + E T
Sbjct: 720 TTSDKPAPTTPKETAPT-TPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHK 778
Query: 274 LGLQDT--ITAELVVIEDAAEPKEPAPP---NGSAAEPPTEAASREEN-----QAGPEAT 323
+ T ++AE PKEP P +A +P ++++ + PE T
Sbjct: 779 SPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETT 838
Query: 324 TSDPQ 328
T+ P+
Sbjct: 839 TAAPK 843
Score = 41.6 bits (96), Expect = 0.001
Identities = 57/227 (25%), Positives = 72/227 (31%), Gaps = 23/227 (10%)
Query: 103 SAPATAKENAAAPSPVRAPAPSPAKEERKT---EVVMNSQQTPVGTPKDKRVSNTPLRTV 159
SAP T KE AP+ + PAP+ KE T E + ++ TPK+ TP +
Sbjct: 295 SAPTTPKE--PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP-APTTPKKPA 351
Query: 160 DGSPMMKAVVHAVDGTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGA 219
+P A P + E K T E T A +
Sbjct: 352 PTTPKEPA--------------PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKP 397
Query: 220 ARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDT 279
A TTP T + T P P + P T E T K
Sbjct: 398 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK 457
Query: 280 ITAELVVIEDA-AEPKEPAP--PNGSAAEPPTEAASREENQAGPEAT 323
+ E A PKEPAP P A P E A + P T
Sbjct: 458 EPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTT 504
Score = 35.0 bits (79), Expect = 0.098
Identities = 63/244 (25%), Positives = 85/244 (34%), Gaps = 29/244 (11%)
Query: 102 DSAPATAKENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTP---VGTPKDKRVSNTPLRT 158
+ AP T KE AP+ + PAP+ KE T + TP T +K TP +
Sbjct: 490 EPAPTTPKE--PAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKP 547
Query: 159 VDGSPMMKAVVHAVDGTAENGIHPLSSSEVDELIHKADE---VTLSEAGSTAGAAETRGA 215
+P A + T P ++ + E T E T
Sbjct: 548 APTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 607
Query: 216 VEGAARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLG 275
+ A TTP T ++ +P T P P + P T + A T G
Sbjct: 608 PKETAPTTPKGTAPTTLK-EPAPTTPKKPA--PKELAPTTTKEPTSTTCDKPAPTTP-KG 663
Query: 276 LQDTITAELVVIEDAAEPKEPAP--PNGSA----AEP----PTEAASRE---ENQAGPEA 322
T E PKEPAP P G+A EP P + A +E GP +
Sbjct: 664 TAPTTPKE----PAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTS 719
Query: 323 TTSD 326
TTSD
Sbjct: 720 TTSD 723
Score = 34.3 bits (77), Expect = 0.17
Identities = 58/228 (25%), Positives = 73/228 (32%), Gaps = 30/228 (13%)
Query: 105 PATAKENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPM 164
PA AAAP+ + PAP+ KE T TPK+ TP T +P
Sbjct: 571 PAPTTPKAAAPNTPKEPAPTTPKEPAPT------------TPKEP-APTTPKETAPTTP- 616
Query: 165 MKAVVHAVDGTAENGI-HPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTT 223
GTA + P ++ + T E ST +G A TT
Sbjct: 617 --------KGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 668
Query: 224 PSRREITGVQAQPGEATSGPPGIQPG--QEPPVTMIFMGYQNVEDEAETKKVLGLQDTIT 281
P T +P T P G P +EP T TK
Sbjct: 669 PKEPAPT-TPKEPAPTT--PKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKP 725
Query: 282 AELVVIEDA-AEPKEPAPPNGSAAEPPT-EAASREENQAGPEATTSDP 327
A E A PKEPAP P T E ++ TT +P
Sbjct: 726 APTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEP 773
Score = 31.2 bits (69), Expect = 1.4
Identities = 52/232 (22%), Positives = 74/232 (31%), Gaps = 28/232 (12%)
Query: 102 DSAPATAKENAA------APSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTP 155
+ AP T KE A AP+ + PAP+ KE T + + P T + TP
Sbjct: 466 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT-----TTKKPAPTTPKEPAPTTP 520
Query: 156 LRTVDGSPMMKAVVHAVDGTAENGIHPLSSSEVDELIHKADE----VTLSEAGSTAGAAE 211
T +P K + A + + +EL E T E T A
Sbjct: 521 KETAPTTP-KKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAA 579
Query: 212 TRGAVEGAARTTPSRREITGVQAQPGEATSGPPG-IQPGQEPPVTMIFMGYQNVEDEAET 270
+ A TTP +P T P P + P T +++ A T
Sbjct: 580 APNTPKEPAPTTPK---------EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPT 630
Query: 271 --KKVLGLQDTITAELVVIEDAAEPKEPAPPNGSAAEPPTEAASREENQAGP 320
KK + T + P P G+A P E A + P
Sbjct: 631 TPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 682
Score = 28.5 bits (62), Expect = 9.1
Identities = 49/229 (21%), Positives = 83/229 (36%), Gaps = 15/229 (6%)
Query: 109 KENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAV 168
K A P R P + ++T + +N ++T V T K+ +N T DG +
Sbjct: 158 KITTAKPINPRPSLPPNSDTSKETSLTVN-KETTVET-KETTTTNKQTST-DGKEKTTSA 214
Query: 169 --VHAVDGTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTTPSR 226
+++ T+ + P +S + + KA+ T A +T T + A TTP
Sbjct: 215 KETQSIEKTSAKDLAP-TSKVLAKPTPKAETTTKGPALTTP-KEPTPTTPKEPASTTPKE 272
Query: 227 REITGVQA------QPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDTI 280
T +++ +P T+ P + P T ++ A T T
Sbjct: 273 PTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT 332
Query: 281 TAELVVIEDAAE--PKEPAPPNGSAAEPPTEAASREENQAGPEATTSDP 327
+ ++ A PK+PAP P T P TT +P
Sbjct: 333 KSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEP 381
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 46.6 bits (109), Expect = 3e-05
Identities = 58/245 (23%), Positives = 87/245 (35%), Gaps = 21/245 (8%)
Query: 102 DSAPATAKENA------AAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTP 155
+ AP T KE A AP+ ++ PAP+ K+ E+ + + P T DK TP
Sbjct: 654 EPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP 713
Query: 156 LRTVDGSPMMKAVVHAVD--GTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETR 213
T +P A + T G P + E K + E T T
Sbjct: 714 KGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK--KPAPKELAPTTTKGPTS 771
Query: 214 GAVEGAARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKV 273
+ A TTP T +P T P + PP T + E T
Sbjct: 772 TTSDKPAPTTPKETAPT-TPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHK 830
Query: 274 LGLQDT--ITAELVVIEDAAEPKEPAPP---NGSAAEPPTEAASREEN-----QAGPEAT 323
+ T ++AE PKEP P +A +P ++++ + PE T
Sbjct: 831 SPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETT 890
Query: 324 TSDPQ 328
T+ P+
Sbjct: 891 TAAPK 895
Score = 41.6 bits (96), Expect = 0.001
Identities = 57/227 (25%), Positives = 72/227 (31%), Gaps = 23/227 (10%)
Query: 103 SAPATAKENAAAPSPVRAPAPSPAKEERKT---EVVMNSQQTPVGTPKDKRVSNTPLRTV 159
SAP T KE AP+ + PAP+ KE T E + ++ TPK+ TP +
Sbjct: 347 SAPTTPKE--PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP-APTTPKKPA 403
Query: 160 DGSPMMKAVVHAVDGTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGA 219
+P A P + E K T E T A +
Sbjct: 404 PTTPKEPA--------------PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKP 449
Query: 220 ARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDT 279
A TTP T + T P P + P T E T K
Sbjct: 450 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK 509
Query: 280 ITAELVVIEDA-AEPKEPAP--PNGSAAEPPTEAASREENQAGPEAT 323
+ E A PKEPAP P A P E A + P T
Sbjct: 510 EPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTT 556
Score = 35.0 bits (79), Expect = 0.098
Identities = 63/244 (25%), Positives = 85/244 (34%), Gaps = 29/244 (11%)
Query: 102 DSAPATAKENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTP---VGTPKDKRVSNTPLRT 158
+ AP T KE AP+ + PAP+ KE T + TP T +K TP +
Sbjct: 542 EPAPTTPKE--PAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKP 599
Query: 159 VDGSPMMKAVVHAVDGTAENGIHPLSSSEVDELIHKADE---VTLSEAGSTAGAAETRGA 215
+P A + T P ++ + E T E T
Sbjct: 600 APTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 659
Query: 216 VEGAARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLG 275
+ A TTP T ++ +P T P P + P T + A T G
Sbjct: 660 PKETAPTTPKGTAPTTLK-EPAPTTPKKPA--PKELAPTTTKEPTSTTCDKPAPTTP-KG 715
Query: 276 LQDTITAELVVIEDAAEPKEPAP--PNGSA----AEP----PTEAASRE---ENQAGPEA 322
T E PKEPAP P G+A EP P + A +E GP +
Sbjct: 716 TAPTTPKE----PAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTS 771
Query: 323 TTSD 326
TTSD
Sbjct: 772 TTSD 775
Score = 34.3 bits (77), Expect = 0.17
Identities = 58/228 (25%), Positives = 73/228 (32%), Gaps = 30/228 (13%)
Query: 105 PATAKENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPM 164
PA AAAP+ + PAP+ KE T TPK+ TP T +P
Sbjct: 623 PAPTTPKAAAPNTPKEPAPTTPKEPAPT------------TPKEP-APTTPKETAPTTP- 668
Query: 165 MKAVVHAVDGTAENGI-HPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTT 223
GTA + P ++ + T E ST +G A TT
Sbjct: 669 --------KGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 720
Query: 224 PSRREITGVQAQPGEATSGPPGIQPG--QEPPVTMIFMGYQNVEDEAETKKVLGLQDTIT 281
P T +P T P G P +EP T TK
Sbjct: 721 PKEPAPT-TPKEPAPTT--PKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKP 777
Query: 282 AELVVIEDA-AEPKEPAPPNGSAAEPPT-EAASREENQAGPEATTSDP 327
A E A PKEPAP P T E ++ TT +P
Sbjct: 778 APTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEP 825
Score = 31.2 bits (69), Expect = 1.4
Identities = 52/232 (22%), Positives = 74/232 (31%), Gaps = 28/232 (12%)
Query: 102 DSAPATAKENAA------APSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTP 155
+ AP T KE A AP+ + PAP+ KE T + + P T + TP
Sbjct: 518 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT-----TTKKPAPTTPKEPAPTTP 572
Query: 156 LRTVDGSPMMKAVVHAVDGTAENGIHPLSSSEVDELIHKADE----VTLSEAGSTAGAAE 211
T +P K + A + + +EL E T E T A
Sbjct: 573 KETAPTTP-KKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAA 631
Query: 212 TRGAVEGAARTTPSRREITGVQAQPGEATSGPPG-IQPGQEPPVTMIFMGYQNVEDEAET 270
+ A TTP +P T P P + P T +++ A T
Sbjct: 632 APNTPKEPAPTTPK---------EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPT 682
Query: 271 --KKVLGLQDTITAELVVIEDAAEPKEPAPPNGSAAEPPTEAASREENQAGP 320
KK + T + P P G+A P E A + P
Sbjct: 683 TPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 734
Score = 28.5 bits (62), Expect = 9.1
Identities = 49/229 (21%), Positives = 83/229 (36%), Gaps = 15/229 (6%)
Query: 109 KENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAV 168
K A P R P + ++T + +N ++T V T K+ +N T DG +
Sbjct: 210 KITTAKPINPRPSLPPNSDTSKETSLTVN-KETTVET-KETTTTNKQTST-DGKEKTTSA 266
Query: 169 --VHAVDGTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTTPSR 226
+++ T+ + P +S + + KA+ T A +T T + A TTP
Sbjct: 267 KETQSIEKTSAKDLAP-TSKVLAKPTPKAETTTKGPALTTP-KEPTPTTPKEPASTTPKE 324
Query: 227 REITGVQA------QPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDTI 280
T +++ +P T+ P + P T ++ A T T
Sbjct: 325 PTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT 384
Query: 281 TAELVVIEDAAE--PKEPAPPNGSAAEPPTEAASREENQAGPEATTSDP 327
+ ++ A PK+PAP P T P TT +P
Sbjct: 385 KSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEP 433
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 46.6 bits (109), Expect = 3e-05
Identities = 58/245 (23%), Positives = 87/245 (35%), Gaps = 21/245 (8%)
Query: 102 DSAPATAKENA------AAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTP 155
+ AP T KE A AP+ ++ PAP+ K+ E+ + + P T DK TP
Sbjct: 695 EPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP 754
Query: 156 LRTVDGSPMMKAVVHAVD--GTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETR 213
T +P A + T G P + E K + E T T
Sbjct: 755 KGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK--KPAPKELAPTTTKGPTS 812
Query: 214 GAVEGAARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKV 273
+ A TTP T +P T P + PP T + E T
Sbjct: 813 TTSDKPAPTTPKETAPT-TPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHK 871
Query: 274 LGLQDT--ITAELVVIEDAAEPKEPAPP---NGSAAEPPTEAASREEN-----QAGPEAT 323
+ T ++AE PKEP P +A +P ++++ + PE T
Sbjct: 872 SPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETT 931
Query: 324 TSDPQ 328
T+ P+
Sbjct: 932 TAAPK 936
Score = 41.6 bits (96), Expect = 0.001
Identities = 57/227 (25%), Positives = 72/227 (31%), Gaps = 23/227 (10%)
Query: 103 SAPATAKENAAAPSPVRAPAPSPAKEERKT---EVVMNSQQTPVGTPKDKRVSNTPLRTV 159
SAP T KE AP+ + PAP+ KE T E + ++ TPK+ TP +
Sbjct: 388 SAPTTPKE--PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP-APTTPKKPA 444
Query: 160 DGSPMMKAVVHAVDGTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGA 219
+P A P + E K T E T A +
Sbjct: 445 PTTPKEPA--------------PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKP 490
Query: 220 ARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDT 279
A TTP T + T P P + P T E T K
Sbjct: 491 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK 550
Query: 280 ITAELVVIEDA-AEPKEPAP--PNGSAAEPPTEAASREENQAGPEAT 323
+ E A PKEPAP P A P E A + P T
Sbjct: 551 EPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTT 597
Score = 35.0 bits (79), Expect = 0.098
Identities = 63/244 (25%), Positives = 85/244 (34%), Gaps = 29/244 (11%)
Query: 102 DSAPATAKENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTP---VGTPKDKRVSNTPLRT 158
+ AP T KE AP+ + PAP+ KE T + TP T +K TP +
Sbjct: 583 EPAPTTPKE--PAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKP 640
Query: 159 VDGSPMMKAVVHAVDGTAENGIHPLSSSEVDELIHKADE---VTLSEAGSTAGAAETRGA 215
+P A + T P ++ + E T E T
Sbjct: 641 APTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 700
Query: 216 VEGAARTTPSRREITGVQAQPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLG 275
+ A TTP T ++ +P T P P + P T + A T G
Sbjct: 701 PKETAPTTPKGTAPTTLK-EPAPTTPKKPA--PKELAPTTTKEPTSTTCDKPAPTTP-KG 756
Query: 276 LQDTITAELVVIEDAAEPKEPAP--PNGSA----AEP----PTEAASRE---ENQAGPEA 322
T E PKEPAP P G+A EP P + A +E GP +
Sbjct: 757 TAPTTPKE----PAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTS 812
Query: 323 TTSD 326
TTSD
Sbjct: 813 TTSD 816
Score = 34.3 bits (77), Expect = 0.17
Identities = 58/228 (25%), Positives = 73/228 (32%), Gaps = 30/228 (13%)
Query: 105 PATAKENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPM 164
PA AAAP+ + PAP+ KE T TPK+ TP T +P
Sbjct: 664 PAPTTPKAAAPNTPKEPAPTTPKEPAPT------------TPKEP-APTTPKETAPTTP- 709
Query: 165 MKAVVHAVDGTAENGI-HPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTT 223
GTA + P ++ + T E ST +G A TT
Sbjct: 710 --------KGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 761
Query: 224 PSRREITGVQAQPGEATSGPPGIQPG--QEPPVTMIFMGYQNVEDEAETKKVLGLQDTIT 281
P T +P T P G P +EP T TK
Sbjct: 762 PKEPAPT-TPKEPAPTT--PKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKP 818
Query: 282 AELVVIEDA-AEPKEPAPPNGSAAEPPT-EAASREENQAGPEATTSDP 327
A E A PKEPAP P T E ++ TT +P
Sbjct: 819 APTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEP 866
Score = 31.2 bits (69), Expect = 1.4
Identities = 52/232 (22%), Positives = 74/232 (31%), Gaps = 28/232 (12%)
Query: 102 DSAPATAKENAA------APSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTP 155
+ AP T KE A AP+ + PAP+ KE T + + P T + TP
Sbjct: 559 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT-----TTKKPAPTTPKEPAPTTP 613
Query: 156 LRTVDGSPMMKAVVHAVDGTAENGIHPLSSSEVDELIHKADE----VTLSEAGSTAGAAE 211
T +P K + A + + +EL E T E T A
Sbjct: 614 KETAPTTP-KKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAA 672
Query: 212 TRGAVEGAARTTPSRREITGVQAQPGEATSGPPG-IQPGQEPPVTMIFMGYQNVEDEAET 270
+ A TTP +P T P P + P T +++ A T
Sbjct: 673 APNTPKEPAPTTPK---------EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPT 723
Query: 271 --KKVLGLQDTITAELVVIEDAAEPKEPAPPNGSAAEPPTEAASREENQAGP 320
KK + T + P P G+A P E A + P
Sbjct: 724 TPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 775
Score = 28.5 bits (62), Expect = 9.1
Identities = 49/229 (21%), Positives = 83/229 (36%), Gaps = 15/229 (6%)
Query: 109 KENAAAPSPVRAPAPSPAKEERKTEVVMNSQQTPVGTPKDKRVSNTPLRTVDGSPMMKAV 168
K A P R P + ++T + +N ++T V T K+ +N T DG +
Sbjct: 251 KITTAKPINPRPSLPPNSDTSKETSLTVN-KETTVET-KETTTTNKQTST-DGKEKTTSA 307
Query: 169 --VHAVDGTAENGIHPLSSSEVDELIHKADEVTLSEAGSTAGAAETRGAVEGAARTTPSR 226
+++ T+ + P +S + + KA+ T A +T T + A TTP
Sbjct: 308 KETQSIEKTSAKDLAP-TSKVLAKPTPKAETTTKGPALTTP-KEPTPTTPKEPASTTPKE 365
Query: 227 REITGVQA------QPGEATSGPPGIQPGQEPPVTMIFMGYQNVEDEAETKKVLGLQDTI 280
T +++ +P T+ P + P T ++ A T T
Sbjct: 366 PTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT 425
Query: 281 TAELVVIEDAAE--PKEPAPPNGSAAEPPTEAASREENQAGPEATTSDP 327
+ ++ A PK+PAP P T P TT +P
Sbjct: 426 KSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEP 474
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 45.8 bits (107), Expect = 6e-05
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 4 LAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSA 63
+A+ ++ Q+ + + E+ +++ + K RQLE+ER LQ + + + LE S+
Sbjct: 1310 VASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTL 1369
Query: 64 SEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATA 108
+ D ++++QD LE+ R +KEIE L + A A
Sbjct: 1370 NIQLSDSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAA 1414
Score = 35.8 bits (81), Expect = 0.057
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 7 ETTSQQERLQA----IAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSS 62
+ T Q+E +QA + + ++RQ + EN+ ++LE + QL K+ L+E+ L+
Sbjct: 846 QVTRQEEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKN-LLQEQ--LQAETEL 902
Query: 63 ASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENA 112
+E +E R ++ +L + +RLE+E +RG A K+ A
Sbjct: 903 YAEAEEMRVRLAAKKQELEEILHEMEARLEEE---EDRGQQLQAERKKMA 949
Score = 34.3 bits (77), Expect = 0.17
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 16/118 (13%)
Query: 2 EVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPS 61
E + E +Q +++ +K K+ EI Q+EDER+ + K +A
Sbjct: 1828 EQVEQEAREKQAATKSLKQKDKKLKEI---LLQVEDERKMAEQYKEQA-----------E 1873
Query: 62 SASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVR 119
+ + L+RQ+++ E++++ + + +L++E++ E +S A +E A S +R
Sbjct: 1874 KGNARVKQLKRQLEEAEEESQRINANRRKLQRELD--EATESNEAMGREVNALKSKLR 1929
Score = 33.9 bits (76), Expect = 0.22
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 14 RLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDL--- 70
R +AI + RK QA++++ +R+LED R + + A + + + EDL
Sbjct: 1640 REEAIKQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAA 1699
Query: 71 -RRQMQDDEQKTRLLEDSVSRL 91
R + Q D +K L E+ S L
Sbjct: 1700 ERARKQADLEKEELAEELASSL 1721
Score = 33.5 bits (75), Expect = 0.28
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 21 KRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDDEQK 80
KR + ++E + QLE+ +LQ + LR L + + + DL+ + + +E+K
Sbjct: 1534 KRALETQMEEMKTQLEELEDELQATEDAKLR---LEVNMQALKGQFERDLQARDEQNEEK 1590
Query: 81 TRLLEDSVSRLEKEIEVLERGDSAPATAKE 110
R L+ + E E+E + + A AK+
Sbjct: 1591 RRQLQRQLHEYETELEDERKQRALAAAAKK 1620
Score = 31.6 bits (70), Expect = 1.1
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 16 QAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQ 75
+A+ E + + E+E + L+ E L K + LE + + E+++ Q++
Sbjct: 1490 RALEEALEAKEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLE 1549
Query: 76 DDEQKTRLLEDSVSRLEKEIEVLE 99
+ E + + ED+ RLE ++ L+
Sbjct: 1550 ELEDELQATEDAKLRLEVNMQALK 1573
Score = 31.6 bits (70), Expect = 1.1
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 2 EVLAAETTSQQERLQAIA-EKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLE--- 57
E LA E S A+ EKR+ +A I +LE+E+ ++ + + + E
Sbjct: 1711 EELAEELASSLSGRNALQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLS 1770
Query: 58 ---GTPSSASEGDEDLRRQM--QDDEQKTRLLE----------DSVSRLEKEIEVLERGD 102
T S ++ +E R+Q+ Q+ E +++L E +++ LE +I LE +
Sbjct: 1771 NELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSKFKSTIAALEAKIAQLE--E 1828
Query: 103 SAPATAKENAAAPSPVR 119
A+E AA ++
Sbjct: 1829 QVEQEAREKQAATKSLK 1845
Score = 31.2 bits (69), Expect = 1.4
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 2 EVLAAETT----SQQERLQAIAEKRKRQA---EIENKRRQLEDERRQLQHLKSKALRERW 54
E L AET +++ R++ A+K++ + E+E + + ED +QLQ + K ++
Sbjct: 894 EQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQML 953
Query: 55 LLEGTPSSASEGDEDLRRQMQDDEQKTRLLEDSV-------SRLEKEIEVLE 99
LE + L+ + E K + LED + ++L KE ++LE
Sbjct: 954 DLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLE 1005
Score = 30.8 bits (68), Expect = 1.8
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 12 QERLQAIAEKRKR-QAEIENKRRQLEDERRQ---LQHLKSKALRERWLLEGTPSSASEGD 67
Q R + EKR++ Q ++ +LEDER+Q K K + LE SA +G
Sbjct: 1581 QARDEQNEEKRRQLQRQLHEYETELEDERKQRALAAAAKKKLEGDLKDLELQADSAIKGR 1640
Query: 68 EDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERG-DSAPATAKEN 111
E+ +Q+ R L+ + ++E+E D ATAKEN
Sbjct: 1641 EEAIKQL-------RKLQAQMKDFQRELEDARASRDEIFATAKEN 1678
Score = 28.5 bits (62), Expect = 9.1
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 5 AAETTSQQERLQA-IAEKR----KRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGT 59
A++ Q LQA IAE + K++ E++ +L+DE Q K+ AL++ LEG
Sbjct: 1064 ASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQ----KNNALKKIRELEGH 1119
Query: 60 PSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIE 96
S E + R E++ R L + + L+ E+E
Sbjct: 1120 ISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELE 1156
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 45.8 bits (107), Expect = 6e-05
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 4 LAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSA 63
+A+ ++ Q+ + + E+ +++ + K RQLE+ER LQ + + + LE S+
Sbjct: 1317 VASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTL 1376
Query: 64 SEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATA 108
+ D ++++QD LE+ R +KEIE L + A A
Sbjct: 1377 NIQLSDSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAA 1421
Score = 35.8 bits (81), Expect = 0.057
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 7 ETTSQQERLQA----IAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSS 62
+ T Q+E +QA + + ++RQ + EN+ ++LE + QL K+ L+E+ L+
Sbjct: 853 QVTRQEEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKN-LLQEQ--LQAETEL 909
Query: 63 ASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENA 112
+E +E R ++ +L + +RLE+E +RG A K+ A
Sbjct: 910 YAEAEEMRVRLAAKKQELEEILHEMEARLEEE---EDRGQQLQAERKKMA 956
Score = 34.3 bits (77), Expect = 0.17
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 16/118 (13%)
Query: 2 EVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPS 61
E + E +Q +++ +K K+ EI Q+EDER+ + K +A
Sbjct: 1835 EQVEQEAREKQAATKSLKQKDKKLKEI---LLQVEDERKMAEQYKEQA-----------E 1880
Query: 62 SASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVR 119
+ + L+RQ+++ E++++ + + +L++E++ E +S A +E A S +R
Sbjct: 1881 KGNARVKQLKRQLEEAEEESQRINANRRKLQRELD--EATESNEAMGREVNALKSKLR 1936
Score = 33.9 bits (76), Expect = 0.22
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 14 RLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDL--- 70
R +AI + RK QA++++ +R+LED R + + A + + + EDL
Sbjct: 1647 REEAIKQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAA 1706
Query: 71 -RRQMQDDEQKTRLLEDSVSRL 91
R + Q D +K L E+ S L
Sbjct: 1707 ERARKQADLEKEELAEELASSL 1728
Score = 33.5 bits (75), Expect = 0.28
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 21 KRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDDEQK 80
KR + ++E + QLE+ +LQ + LR L + + + DL+ + + +E+K
Sbjct: 1541 KRALETQMEEMKTQLEELEDELQATEDAKLR---LEVNMQALKGQFERDLQARDEQNEEK 1597
Query: 81 TRLLEDSVSRLEKEIEVLERGDSAPATAKE 110
R L+ + E E+E + + A AK+
Sbjct: 1598 RRQLQRQLHEYETELEDERKQRALAAAAKK 1627
Score = 31.6 bits (70), Expect = 1.1
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 16 QAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQ 75
+A+ E + + E+E + L+ E L K + LE + + E+++ Q++
Sbjct: 1497 RALEEALEAKEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLE 1556
Query: 76 DDEQKTRLLEDSVSRLEKEIEVLE 99
+ E + + ED+ RLE ++ L+
Sbjct: 1557 ELEDELQATEDAKLRLEVNMQALK 1580
Score = 31.6 bits (70), Expect = 1.1
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 2 EVLAAETTSQQERLQAIA-EKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLE--- 57
E LA E S A+ EKR+ +A I +LE+E+ ++ + + + E
Sbjct: 1718 EELAEELASSLSGRNALQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLS 1777
Query: 58 ---GTPSSASEGDEDLRRQM--QDDEQKTRLLE----------DSVSRLEKEIEVLERGD 102
T S ++ +E R+Q+ Q+ E +++L E +++ LE +I LE +
Sbjct: 1778 NELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSKFKSTIAALEAKIAQLE--E 1835
Query: 103 SAPATAKENAAAPSPVR 119
A+E AA ++
Sbjct: 1836 QVEQEAREKQAATKSLK 1852
Score = 31.2 bits (69), Expect = 1.4
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 2 EVLAAETT----SQQERLQAIAEKRKRQA---EIENKRRQLEDERRQLQHLKSKALRERW 54
E L AET +++ R++ A+K++ + E+E + + ED +QLQ + K ++
Sbjct: 901 EQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQML 960
Query: 55 LLEGTPSSASEGDEDLRRQMQDDEQKTRLLEDSV-------SRLEKEIEVLE 99
LE + L+ + E K + LED + ++L KE ++LE
Sbjct: 961 DLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLE 1012
Score = 30.8 bits (68), Expect = 1.8
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 12 QERLQAIAEKRKR-QAEIENKRRQLEDERRQ---LQHLKSKALRERWLLEGTPSSASEGD 67
Q R + EKR++ Q ++ +LEDER+Q K K + LE SA +G
Sbjct: 1588 QARDEQNEEKRRQLQRQLHEYETELEDERKQRALAAAAKKKLEGDLKDLELQADSAIKGR 1647
Query: 68 EDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERG-DSAPATAKEN 111
E+ +Q+ R L+ + ++E+E D ATAKEN
Sbjct: 1648 EEAIKQL-------RKLQAQMKDFQRELEDARASRDEIFATAKEN 1685
Score = 28.5 bits (62), Expect = 9.1
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 5 AAETTSQQERLQA-IAEKR----KRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGT 59
A++ Q LQA IAE + K++ E++ +L+DE Q K+ AL++ LEG
Sbjct: 1071 ASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQ----KNNALKKIRELEGH 1126
Query: 60 PSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIE 96
S E + R E++ R L + + L+ E+E
Sbjct: 1127 ISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELE 1163
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 45.8 bits (107), Expect = 6e-05
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 4 LAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSA 63
+A+ ++ Q+ + + E+ +++ + K RQLE+ER LQ + + + LE S+
Sbjct: 1317 VASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTL 1376
Query: 64 SEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATA 108
+ D ++++QD LE+ R +KEIE L + A A
Sbjct: 1377 NIQLSDSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAA 1421
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 2 EVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPS 61
E + E +Q +++ +K K+ EI Q+EDER+ + K +A
Sbjct: 1835 EQVEQEAREKQAATKSLKQKDKKLKEI---LLQVEDERKMAEQYKEQA-----------E 1880
Query: 62 SASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRAP 121
+ + L+RQ+++ E++++ + + +L++E++ E +S A +E A S +R P
Sbjct: 1881 KGNARVKQLKRQLEEAEEESQRINANRRKLQRELD--EATESNEAMGREVNALKSKLRGP 1938
Query: 122 APSPAKE 128
P +
Sbjct: 1939 PPQETSQ 1945
Score = 35.8 bits (81), Expect = 0.057
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 7 ETTSQQERLQA----IAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSS 62
+ T Q+E +QA + + ++RQ + EN+ ++LE + QL K+ L+E+ L+
Sbjct: 853 QVTRQEEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKN-LLQEQ--LQAETEL 909
Query: 63 ASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENA 112
+E +E R ++ +L + +RLE+E +RG A K+ A
Sbjct: 910 YAEAEEMRVRLAAKKQELEEILHEMEARLEEE---EDRGQQLQAERKKMA 956
Score = 33.9 bits (76), Expect = 0.22
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 14 RLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDL--- 70
R +AI + RK QA++++ +R+LED R + + A + + + EDL
Sbjct: 1647 REEAIKQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAA 1706
Query: 71 -RRQMQDDEQKTRLLEDSVSRL 91
R + Q D +K L E+ S L
Sbjct: 1707 ERARKQADLEKEELAEELASSL 1728
Score = 33.5 bits (75), Expect = 0.28
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 21 KRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDDEQK 80
KR + ++E + QLE+ +LQ + LR L + + + DL+ + + +E+K
Sbjct: 1541 KRALETQMEEMKTQLEELEDELQATEDAKLR---LEVNMQALKGQFERDLQARDEQNEEK 1597
Query: 81 TRLLEDSVSRLEKEIEVLERGDSAPATAKE 110
R L+ + E E+E + + A AK+
Sbjct: 1598 RRQLQRQLHEYETELEDERKQRALAAAAKK 1627
Score = 31.6 bits (70), Expect = 1.1
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 16 QAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQ 75
+A+ E + + E+E + L+ E L K + LE + + E+++ Q++
Sbjct: 1497 RALEEALEAKEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLE 1556
Query: 76 DDEQKTRLLEDSVSRLEKEIEVLE 99
+ E + + ED+ RLE ++ L+
Sbjct: 1557 ELEDELQATEDAKLRLEVNMQALK 1580
Score = 31.6 bits (70), Expect = 1.1
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 2 EVLAAETTSQQERLQAIA-EKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLE--- 57
E LA E S A+ EKR+ +A I +LE+E+ ++ + + + E
Sbjct: 1718 EELAEELASSLSGRNALQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLS 1777
Query: 58 ---GTPSSASEGDEDLRRQM--QDDEQKTRLLE----------DSVSRLEKEIEVLERGD 102
T S ++ +E R+Q+ Q+ E +++L E +++ LE +I LE +
Sbjct: 1778 NELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSKFKSTIAALEAKIAQLE--E 1835
Query: 103 SAPATAKENAAAPSPVR 119
A+E AA ++
Sbjct: 1836 QVEQEAREKQAATKSLK 1852
Score = 31.2 bits (69), Expect = 1.4
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 2 EVLAAETT----SQQERLQAIAEKRKRQA---EIENKRRQLEDERRQLQHLKSKALRERW 54
E L AET +++ R++ A+K++ + E+E + + ED +QLQ + K ++
Sbjct: 901 EQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQML 960
Query: 55 LLEGTPSSASEGDEDLRRQMQDDEQKTRLLEDSV-------SRLEKEIEVLE 99
LE + L+ + E K + LED + ++L KE ++LE
Sbjct: 961 DLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLE 1012
Score = 30.8 bits (68), Expect = 1.8
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 12 QERLQAIAEKRKR-QAEIENKRRQLEDERRQ---LQHLKSKALRERWLLEGTPSSASEGD 67
Q R + EKR++ Q ++ +LEDER+Q K K + LE SA +G
Sbjct: 1588 QARDEQNEEKRRQLQRQLHEYETELEDERKQRALAAAAKKKLEGDLKDLELQADSAIKGR 1647
Query: 68 EDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERG-DSAPATAKEN 111
E+ +Q+ R L+ + ++E+E D ATAKEN
Sbjct: 1648 EEAIKQL-------RKLQAQMKDFQRELEDARASRDEIFATAKEN 1685
Score = 28.5 bits (62), Expect = 9.1
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 5 AAETTSQQERLQA-IAEKR----KRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGT 59
A++ Q LQA IAE + K++ E++ +L+DE Q K+ AL++ LEG
Sbjct: 1071 ASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQ----KNNALKKIRELEGH 1126
Query: 60 PSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIE 96
S E + R E++ R L + + L+ E+E
Sbjct: 1127 ISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELE 1163
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 45.8 bits (107), Expect = 6e-05
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 4 LAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSA 63
+A+ ++ Q+ + + E+ +++ + K RQLE+ER LQ + + + LE S+
Sbjct: 1310 VASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTL 1369
Query: 64 SEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATA 108
+ D ++++QD LE+ R +KEIE L + A A
Sbjct: 1370 NIQLSDSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAA 1414
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 2 EVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPS 61
E + E +Q +++ +K K+ EI Q+EDER+ + K +A
Sbjct: 1828 EQVEQEAREKQAATKSLKQKDKKLKEI---LLQVEDERKMAEQYKEQA-----------E 1873
Query: 62 SASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRAP 121
+ + L+RQ+++ E++++ + + +L++E++ E +S A +E A S +R P
Sbjct: 1874 KGNARVKQLKRQLEEAEEESQRINANRRKLQRELD--EATESNEAMGREVNALKSKLRGP 1931
Query: 122 APSPAKE 128
P +
Sbjct: 1932 PPQETSQ 1938
Score = 35.8 bits (81), Expect = 0.057
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 7 ETTSQQERLQA----IAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSS 62
+ T Q+E +QA + + ++RQ + EN+ ++LE + QL K+ L+E+ L+
Sbjct: 846 QVTRQEEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKN-LLQEQ--LQAETEL 902
Query: 63 ASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSAPATAKENA 112
+E +E R ++ +L + +RLE+E +RG A K+ A
Sbjct: 903 YAEAEEMRVRLAAKKQELEEILHEMEARLEEE---EDRGQQLQAERKKMA 949
Score = 33.9 bits (76), Expect = 0.22
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 14 RLQAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDL--- 70
R +AI + RK QA++++ +R+LED R + + A + + + EDL
Sbjct: 1640 REEAIKQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAA 1699
Query: 71 -RRQMQDDEQKTRLLEDSVSRL 91
R + Q D +K L E+ S L
Sbjct: 1700 ERARKQADLEKEELAEELASSL 1721
Score = 33.5 bits (75), Expect = 0.28
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 21 KRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQDDEQK 80
KR + ++E + QLE+ +LQ + LR L + + + DL+ + + +E+K
Sbjct: 1534 KRALETQMEEMKTQLEELEDELQATEDAKLR---LEVNMQALKGQFERDLQARDEQNEEK 1590
Query: 81 TRLLEDSVSRLEKEIEVLERGDSAPATAKE 110
R L+ + E E+E + + A AK+
Sbjct: 1591 RRQLQRQLHEYETELEDERKQRALAAAAKK 1620
Score = 31.6 bits (70), Expect = 1.1
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 16 QAIAEKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGTPSSASEGDEDLRRQMQ 75
+A+ E + + E+E + L+ E L K + LE + + E+++ Q++
Sbjct: 1490 RALEEALEAKEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLE 1549
Query: 76 DDEQKTRLLEDSVSRLEKEIEVLE 99
+ E + + ED+ RLE ++ L+
Sbjct: 1550 ELEDELQATEDAKLRLEVNMQALK 1573
Score = 31.6 bits (70), Expect = 1.1
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 2 EVLAAETTSQQERLQAIA-EKRKRQAEIENKRRQLEDERRQLQHLKSKALRERWLLE--- 57
E LA E S A+ EKR+ +A I +LE+E+ ++ + + + E
Sbjct: 1711 EELAEELASSLSGRNALQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLS 1770
Query: 58 ---GTPSSASEGDEDLRRQM--QDDEQKTRLLE----------DSVSRLEKEIEVLERGD 102
T S ++ +E R+Q+ Q+ E +++L E +++ LE +I LE +
Sbjct: 1771 NELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSKFKSTIAALEAKIAQLE--E 1828
Query: 103 SAPATAKENAAAPSPVR 119
A+E AA ++
Sbjct: 1829 QVEQEAREKQAATKSLK 1845
Score = 31.2 bits (69), Expect = 1.4
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 2 EVLAAETT----SQQERLQAIAEKRKRQA---EIENKRRQLEDERRQLQHLKSKALRERW 54
E L AET +++ R++ A+K++ + E+E + + ED +QLQ + K ++
Sbjct: 894 EQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQML 953
Query: 55 LLEGTPSSASEGDEDLRRQMQDDEQKTRLLEDSV-------SRLEKEIEVLE 99
LE + L+ + E K + LED + ++L KE ++LE
Sbjct: 954 DLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLE 1005
Score = 30.8 bits (68), Expect = 1.8
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 12 QERLQAIAEKRKR-QAEIENKRRQLEDERRQ---LQHLKSKALRERWLLEGTPSSASEGD 67
Q R + EKR++ Q ++ +LEDER+Q K K + LE SA +G
Sbjct: 1581 QARDEQNEEKRRQLQRQLHEYETELEDERKQRALAAAAKKKLEGDLKDLELQADSAIKGR 1640
Query: 68 EDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERG-DSAPATAKEN 111
E+ +Q+ R L+ + ++E+E D ATAKEN
Sbjct: 1641 EEAIKQL-------RKLQAQMKDFQRELEDARASRDEIFATAKEN 1678
Score = 28.5 bits (62), Expect = 9.1
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 5 AAETTSQQERLQA-IAEKR----KRQAEIENKRRQLEDERRQLQHLKSKALRERWLLEGT 59
A++ Q LQA IAE + K++ E++ +L+DE Q K+ AL++ LEG
Sbjct: 1064 ASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQ----KNNALKKIRELEGH 1119
Query: 60 PSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIE 96
S E + R E++ R L + + L+ E+E
Sbjct: 1120 ISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELE 1156
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.123 0.333
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,619,067
Number of Sequences: 37866
Number of extensions: 785741
Number of successful extensions: 9013
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 777
Number of HSP's that attempted gapping in prelim test: 5950
Number of HSP's gapped (non-prelim): 3056
length of query: 343
length of database: 18,247,518
effective HSP length: 103
effective length of query: 240
effective length of database: 14,347,320
effective search space: 3443356800
effective search space used: 3443356800
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.