PALM 37392

Name: PALM	Sequence: fasta or formatted (343aa)		NCBI GI: 93141029
Description: paralemmin isoform 2		Referenced in: Synapses
Other entries for this name: alt prot [387aa] paralemmin isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.7 40 3 C cysteine 0.9 3 2 D aspartate 5.2 18 2 E glutamate 12.8 44 2 F phenylalanine 0.3 1 1 G glycine 5.8 20 1 H histidine 1.5 5 1 I isoleucine 3.2 11 1 K lysine 5.8 20 2 L leucine 6.1 21 2 M methionine 2.6 9 2 N asparagine 2.3 8 1 P proline 7.9 27 2 Q glutamine 5.8 20 2 R arginine 7.0 24 2 S serine 7.0 24 3 T threonine 7.3 25 2 V valine 6.1 21 2 W tryptophan 0.3 1 1 Y tyrosine 0.3 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 paralemmin isoform 2 PALM 0.968 paralemmin isoform 1 PALM2 0.252 paralemmin 2 isoform b PALM2 0.244 paralemmin 2 isoform a PALM2-AKAP2 0.130 PALM2-AKAP2 protein isoform 2 PALM2-AKAP2 0.130 PALM2-AKAP2 protein isoform 1 PALMD 0.100 palmdelphin PALM3 0.070 hypothetical protein LOC342979 MAP4K4 0.048 mitogen-activated protein kinase kinase kinase kinas... KIAA1598 0.045 shootin1 isoform a PLEC1 0.045 plectin 1 isoform 11 PLEC1 0.045 plectin 1 isoform 10 PLEC1 0.045 plectin 1 isoform 8 PLEC1 0.045 plectin 1 isoform 7 PLEC1 0.045 plectin 1 isoform 6 PLEC1 0.045 plectin 1 isoform 3 PLEC1 0.045 plectin 1 isoform 2 PLEC1 0.045 plectin 1 isoform 1 MAP7D1 0.045 MAP7 domain containing 1 MAP4K4 0.040 mitogen-activated protein kinase kinase kinase kinas... KIAA1598 0.037 shootin1 isoform b ACBD3 0.034 acyl-Coenzyme A binding domain containing 3 PRG4 0.034 proteoglycan 4 isoform D PRG4 0.034 proteoglycan 4 isoform C PRG4 0.034 proteoglycan 4 isoform B PRG4 0.034 proteoglycan 4 isoform A MYH11 0.032 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.032 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.032 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.032 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.