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Search of human proteins with 93102377
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|93102377 RRN3 RNA polymerase I transcription factor homolog
[Homo sapiens]
(651 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|93102377 RRN3 RNA polymerase I transcription factor homolog [... 1315 0.0
gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapi... 36 0.13
gi|4757756 annexin A2 isoform 2 [Homo sapiens] 35 0.22
gi|50845386 annexin A2 isoform 2 [Homo sapiens] 35 0.22
gi|50845388 annexin A2 isoform 1 [Homo sapiens] 35 0.22
gi|209862831 annexin A2 isoform 2 [Homo sapiens] 35 0.22
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 32 2.4
gi|38788260 bromodomain PHD finger transcription factor isoform ... 31 3.1
gi|38788274 bromodomain PHD finger transcription factor isoform ... 31 3.1
gi|118918395 fibronectin type III domain containing 3A isoform 1... 31 3.1
gi|118918397 fibronectin type III domain containing 3A isoform 2... 31 3.1
gi|192447438 protein S, alpha preproprotein [Homo sapiens] 31 4.1
gi|11136628 eukaryotic translation elongation factor 1 beta 2 [H... 31 4.1
gi|4503477 eukaryotic translation elongation factor 1 beta 2 [Ho... 31 4.1
gi|83376130 eukaryotic translation elongation factor 1 beta 2 [H... 31 4.1
gi|5803229 kaiso [Homo sapiens] 30 5.3
gi|4758502 hyaluronan binding protein 2 preproprotein [Homo sapi... 30 7.0
gi|7705558 inositol-3-phosphate synthase 1 [Homo sapiens] 30 9.1
gi|4507205 serum response factor (c-fos serum response element-b... 30 9.1
>gi|93102377 RRN3 RNA polymerase I transcription factor homolog
[Homo sapiens]
Length = 651
Score = 1315 bits (3403), Expect = 0.0
Identities = 651/651 (100%), Positives = 651/651 (100%)
Query: 1 MAAPLLHTRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVL 60
MAAPLLHTRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVL
Sbjct: 1 MAAPLLHTRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVL 60
Query: 61 LKYKKGETNDFELLKNQLLDPDIKDDQIINWLLEFRSSIMYLTKDFEQLISIILRLPWLN 120
LKYKKGETNDFELLKNQLLDPDIKDDQIINWLLEFRSSIMYLTKDFEQLISIILRLPWLN
Sbjct: 61 LKYKKGETNDFELLKNQLLDPDIKDDQIINWLLEFRSSIMYLTKDFEQLISIILRLPWLN 120
Query: 121 RSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGDVDVSDSDDEDDNLP 180
RSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGDVDVSDSDDEDDNLP
Sbjct: 121 RSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGDVDVSDSDDEDDNLP 180
Query: 181 ANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLR 240
ANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLR
Sbjct: 181 ANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLR 240
Query: 241 HEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGP 300
HEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGP
Sbjct: 241 HEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGP 300
Query: 301 ERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHA 360
ERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHA
Sbjct: 301 ERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHA 360
Query: 361 SCHVQFFMFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLI 420
SCHVQFFMFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLI
Sbjct: 361 SCHVQFFMFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLI 420
Query: 421 TVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLK 480
TVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLK
Sbjct: 421 TVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLK 480
Query: 481 EGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVI 540
EGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVI
Sbjct: 481 EGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVI 540
Query: 541 RSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDI 600
RSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDI
Sbjct: 541 RSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDI 600
Query: 601 VEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL 651
VEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL
Sbjct: 601 VEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL 651
>gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo
sapiens]
Length = 1270
Score = 35.8 bits (81), Expect = 0.13
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 20/131 (15%)
Query: 55 TVTEVLLKYKKGETNDFELLKNQLLDPDIKDD-------QIINWLLEFRSSIMYLTKDFE 107
TV +L K + G ++ +++ + DI D ++ E R +M T D
Sbjct: 490 TVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTS 549
Query: 108 QLISIILRLPWLNRSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGDV 167
P ++E Y G Q FL C+ M +HFVPP K+ D
Sbjct: 550 MFCEYFFNCP-------IIEVY----GRTYPVQEYFLEDCIQM--THFVPPPKDKKKKDK 596
Query: 168 DVSDSDDEDDN 178
D +D+D N
Sbjct: 597 DDDGGEDDDAN 607
>gi|4757756 annexin A2 isoform 2 [Homo sapiens]
Length = 339
Score = 35.0 bits (79), Expect = 0.22
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 508 SVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVL 567
++VN +N + + R +++ ++S G + L T +D L
Sbjct: 55 TIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDASEL 114
Query: 568 KRSKKFI----DPIYQVWEDMSAEELQE--------FKKPMKKDIVEDEDDDFLK 610
K S K + D + ++ + +ELQE +K ++KDI+ D DF K
Sbjct: 115 KASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRK 169
>gi|50845386 annexin A2 isoform 2 [Homo sapiens]
Length = 339
Score = 35.0 bits (79), Expect = 0.22
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 508 SVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVL 567
++VN +N + + R +++ ++S G + L T +D L
Sbjct: 55 TIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDASEL 114
Query: 568 KRSKKFI----DPIYQVWEDMSAEELQE--------FKKPMKKDIVEDEDDDFLK 610
K S K + D + ++ + +ELQE +K ++KDI+ D DF K
Sbjct: 115 KASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRK 169
>gi|50845388 annexin A2 isoform 1 [Homo sapiens]
Length = 357
Score = 35.0 bits (79), Expect = 0.22
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 508 SVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVL 567
++VN +N + + R +++ ++S G + L T +D L
Sbjct: 73 TIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDASEL 132
Query: 568 KRSKKFI----DPIYQVWEDMSAEELQE--------FKKPMKKDIVEDEDDDFLK 610
K S K + D + ++ + +ELQE +K ++KDI+ D DF K
Sbjct: 133 KASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRK 187
>gi|209862831 annexin A2 isoform 2 [Homo sapiens]
Length = 339
Score = 35.0 bits (79), Expect = 0.22
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 508 SVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVL 567
++VN +N + + R +++ ++S G + L T +D L
Sbjct: 55 TIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDASEL 114
Query: 568 KRSKKFI----DPIYQVWEDMSAEELQE--------FKKPMKKDIVEDEDDDFLK 610
K S K + D + ++ + +ELQE +K ++KDI+ D DF K
Sbjct: 115 KASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRK 169
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 31.6 bits (70), Expect = 2.4
Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 23/126 (18%)
Query: 186 CHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISV-----YFPTLR 240
CHR ++ R P ++ + E F + S LE Y+HN+ ++ FP +
Sbjct: 49 CHRYSELYGRTDP-----ILDDVGEAFQLMGVSLHELEDYIHNIEPVTFPHQIPSFPVSK 103
Query: 241 HEILELIIEKLLKLDVNASRQGI-----------EDAEETATQTCGGTDSTEGLFNMDED 289
+ +L+ + D ++ I E+ EE T GGT + ++ED
Sbjct: 104 NNVLQF--PQPGSKDAEERKEYIPDYLPPIVSSQEEEEEEQVPTDGGTSAEAMQVPLEED 161
Query: 290 EETEHE 295
+E E E
Sbjct: 162 DELEEE 167
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 31.2 bits (69), Expect = 3.1
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 582 EDMSAEELQEFKKPMKKDIVEDEDD-DFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGS 640
ED AEE Q+ + + ++ ED+DD D+ + +D T SSF +H S+
Sbjct: 148 EDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDDDDASYCTESSFRSHSTYSSTPGRR 207
Query: 641 PPVLYMQPSPL 651
P ++ SP+
Sbjct: 208 KPRVHRPRSPI 218
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 31.2 bits (69), Expect = 3.1
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 582 EDMSAEELQEFKKPMKKDIVEDEDD-DFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGS 640
ED AEE Q+ + + ++ ED+DD D+ + +D T SSF +H S+
Sbjct: 148 EDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDDDDASYCTESSFRSHSTYSSTPGRR 207
Query: 641 PPVLYMQPSPL 651
P ++ SP+
Sbjct: 208 KPRVHRPRSPI 218
>gi|118918395 fibronectin type III domain containing 3A isoform 1
[Homo sapiens]
Length = 1198
Score = 31.2 bits (69), Expect = 3.1
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 288 EDEETEHETKAGPERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLY 344
E EE + ETKA L +V PVA + ++VL++ ++G+ D +LY
Sbjct: 251 EIEEKDEETKAFEALLSNIVKPVASDIQ-ARTVVLTWSPPSSLINGETDESSVPELY 306
>gi|118918397 fibronectin type III domain containing 3A isoform 2
[Homo sapiens]
Length = 1142
Score = 31.2 bits (69), Expect = 3.1
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 288 EDEETEHETKAGPERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLY 344
E EE + ETKA L +V PVA + ++VL++ ++G+ D +LY
Sbjct: 195 EIEEKDEETKAFEALLSNIVKPVASDIQ-ARTVVLTWSPPSSLINGETDESSVPELY 250
>gi|192447438 protein S, alpha preproprotein [Homo sapiens]
Length = 676
Score = 30.8 bits (68), Expect = 4.1
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 179 LPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPT 238
LP N DT + L + ++ ++ L + P + + + ++ + +Y +
Sbjct: 289 LPLNLDTKYELLYLAEQFAG-----VVLYLKFRLPEISRFSAEFDFRTYDSEGVILYAES 343
Query: 239 LRHEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEH 294
+ H LI + K++V E T+ T GG GL+NM EE EH
Sbjct: 344 IDHSAWLLIALRGGKIEVQLKN------EHTSKITTGGDVINNGLWNMVSVEELEH 393
>gi|11136628 eukaryotic translation elongation factor 1 beta 2 [Homo
sapiens]
Length = 225
Score = 30.8 bits (68), Expect = 4.1
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 260 RQGIEDAEETATQTCGGTDSTEG----LFNMDEDEETEHETKAGPERLDQMVHPVAERLD 315
+ G D E+T G TDS + LF D++EE+E + ERL Q A++
Sbjct: 78 KYGPADVEDTTGS--GATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPA 135
Query: 316 ILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDL 347
++ S + DV D + D K ++ R +
Sbjct: 136 LVAK--SSILLDVKPWDDETDMAKLEECVRSI 165
>gi|4503477 eukaryotic translation elongation factor 1 beta 2 [Homo
sapiens]
Length = 225
Score = 30.8 bits (68), Expect = 4.1
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 260 RQGIEDAEETATQTCGGTDSTEG----LFNMDEDEETEHETKAGPERLDQMVHPVAERLD 315
+ G D E+T G TDS + LF D++EE+E + ERL Q A++
Sbjct: 78 KYGPADVEDTTGS--GATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPA 135
Query: 316 ILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDL 347
++ S + DV D + D K ++ R +
Sbjct: 136 LVAK--SSILLDVKPWDDETDMAKLEECVRSI 165
>gi|83376130 eukaryotic translation elongation factor 1 beta 2 [Homo
sapiens]
Length = 225
Score = 30.8 bits (68), Expect = 4.1
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 260 RQGIEDAEETATQTCGGTDSTEG----LFNMDEDEETEHETKAGPERLDQMVHPVAERLD 315
+ G D E+T G TDS + LF D++EE+E + ERL Q A++
Sbjct: 78 KYGPADVEDTTGS--GATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPA 135
Query: 316 ILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDL 347
++ S + DV D + D K ++ R +
Sbjct: 136 LVAK--SSILLDVKPWDDETDMAKLEECVRSI 165
>gi|5803229 kaiso [Homo sapiens]
Length = 672
Score = 30.4 bits (67), Expect = 5.3
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 18/89 (20%)
Query: 574 IDPIYQVWEDMSAEELQEFKKPMKKDIVEDEDDDF-----------LKGEVPQNDTVIGI 622
I PI +SAE+ + MKK IV D DDD K +P N+TV +
Sbjct: 163 IMPIITESFSLSAEDYE-----MKKIIVTDSDDDDDDVIFCSEILPTKETLPSNNTVAQV 217
Query: 623 --TPSSFDTHFRSPSSSVGSPPVLYMQPS 649
P +PS+S SPP+ + P+
Sbjct: 218 QSNPGPVAISDVAPSASNNSPPLTNITPT 246
>gi|4758502 hyaluronan binding protein 2 preproprotein [Homo
sapiens]
Length = 560
Score = 30.0 bits (66), Expect = 7.0
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 377 GFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLLVNWLHIY 436
GF +H W+ S P I G++ G L ++ +T C D+ L +
Sbjct: 317 GFKSTAGKHPWQASLQSSLPLTISMPQGHFCGGALIHPCWV--LTAAHCTDIKTRHLKVV 374
Query: 437 LNNQDSGTKAF 447
L +QD + F
Sbjct: 375 LGDQDLKKEEF 385
>gi|7705558 inositol-3-phosphate synthase 1 [Homo sapiens]
Length = 558
Score = 29.6 bits (65), Expect = 9.1
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 17/201 (8%)
Query: 54 GTVTEVLLKYKKGETNDFELLKN--QLLDPDIKDDQIINWLLEFRSSIMYLTKDFEQLIS 111
G T ++ Y ND E L Q ++ +++ +++ + ++Y +
Sbjct: 323 GLKTMSIVSYNHLGNNDGENLSAPLQFRSKEVSKSNVVDDMVQ-SNPVLYTPGEEPDHCV 381
Query: 112 IILRLPWLNRSQTVVEEYLAFLGNLVSAQTVFLRPCL--SMIASHFVPPRVIIKEGDVDV 169
+I +P++ S+ ++EY + L L T+ L S++A+ + ++ E V
Sbjct: 382 VIKYVPYVGDSKRALDEYTSEL-MLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRV 440
Query: 170 SDSDDEDDNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNL 229
S D D P F H L +++ F P++ P V R C + N+
Sbjct: 441 SFCTDMDPE-PQTF---HPVLSLLSFL------FKAPLVPPGSPVVNALFRQRSC-IENI 489
Query: 230 LRISVYFPTLRHEILELIIEK 250
LR V P H +LE +E+
Sbjct: 490 LRACVGLPPQNHMLLEHKMER 510
>gi|4507205 serum response factor (c-fos serum response
element-binding transcription factor) [Homo sapiens]
Length = 508
Score = 29.6 bits (65), Expect = 9.1
Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 17/119 (14%)
Query: 534 RQMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVLKRSK----KFIDPIYQVWEDMSAEEL 589
R++ P+I S G +Q C N D+ DP +R + D YQV E S+ E
Sbjct: 200 RKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSSGET 259
Query: 590 QEFKKPMKKDIVEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQP 648
++ KP F +P + I PS+ T SS P Y+ P
Sbjct: 260 KDTLKPA-----------FTVTNLPGTTSTIQTAPSTSTT--MQVSSGPSFPITNYLAP 305
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,873,868
Number of Sequences: 37866
Number of extensions: 1108565
Number of successful extensions: 3124
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3120
Number of HSP's gapped (non-prelim): 21
length of query: 651
length of database: 18,247,518
effective HSP length: 109
effective length of query: 542
effective length of database: 14,120,124
effective search space: 7653107208
effective search space used: 7653107208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.