HIF3A 37188

Name: HIF3A	Sequence: fasta or formatted (613aa)		NCBI GI: 90421316
Description: hypoxia inducible factor 3, alpha subunit isoform b		Referenced in: Oxygen Sensing and Hemoglobin
Other entries for this name: alt prot [667aa] hypoxia inducible factor 3, alpha subunit isoform a alt prot [669aa] hypoxia inducible factor 3, alpha subunit isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 53 2 C cysteine 2.0 12 1 D aspartate 6.2 38 3 E glutamate 5.9 36 2 F phenylalanine 2.8 17 1 G glycine 7.5 46 2 H histidine 2.8 17 1 I isoleucine 2.8 17 1 K lysine 2.3 14 1 L leucine 12.9 79 2 M methionine 1.6 10 1 N asparagine 1.6 10 1 P proline 10.0 61 2 Q glutamine 4.4 27 2 R arginine 6.4 39 2 S serine 10.4 64 2 T threonine 5.2 32 2 V valine 3.9 24 2 W tryptophan 0.7 4 1 Y tyrosine 2.1 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypoxia inducible factor 3, alpha subunit isoform b ... HIF3A 1.000 hypoxia inducible factor 3, alpha subunit isoform a ... HIF3A 1.000 hypoxia inducible factor 3, alpha subunit isoform c ... HIF1A 0.258 hypoxia-inducible factor 1, alpha subunit isoform 2 ... HIF1A 0.258 hypoxia-inducible factor 1, alpha subunit isoform 1 [... EPAS1 0.255 endothelial PAS domain protein 1 SIM2 0.135 single-minded homolog 2 long isoform SIM2 0.135 single-minded homolog 2 short isoform SIM1 0.133 single-minded homolog 1 NPAS3 0.118 neuronal PAS domain protein 3 isoform 1 NPAS3 0.113 neuronal PAS domain protein 3 isoform 2 NPAS1 0.113 neuronal PAS domain protein 1 ARNTL2 0.066 aryl hydrocarbon receptor nuclear translocator-like ... CLOCK 0.064 clock ARNT2 0.059 aryl hydrocarbon receptor nuclear translocator 2 [Ho... NPAS2 0.057 neuronal PAS domain protein 2 ARNT 0.056 aryl hydrocarbon receptor nuclear translocator isofo... ARNT 0.056 aryl hydrocarbon receptor nuclear translocator isofor... ARNTL 0.055 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.055 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.055 aryl hydrocarbon receptor nuclear translocator-like ... NPAS4 0.051 neuronal PAS domain protein 4 AHR 0.044 aryl hydrocarbon receptor NCOA1 0.035 nuclear receptor coactivator 1 isoform 2 NCOA1 0.035 nuclear receptor coactivator 1 isoform 3 NCOA1 0.035 nuclear receptor coactivator 1 isoform 1 NCOA2 0.032 nuclear receptor coactivator 2 NCOA3 0.031 nuclear receptor coactivator 3 isoform a NCOA3 0.031 nuclear receptor coactivator 3 isoform b AHRR 0.021 arylhydrocarbon receptor repressor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.