Guide to the Human Genome
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Name: SARS2 Sequence: fasta or formatted (518aa) NCBI GI: 8923421
Description:

seryl-tRNA synthetase 2 isoform b precursor

Referenced in:

tRNA Enzymes

Other entries for this name:
alt prot [520aa] seryl-tRNA synthetase 2 isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         42           2
 C cysteine            1.5          8           1
 D aspartate           3.7         19           1
 E glutamate           7.5         39           3
 F phenylalanine       4.2         22           1
 G glycine             7.5         39           2
 H histidine           2.9         15           2
 I isoleucine          3.3         17           2
 K lysine              2.9         15           1
 L leucine            12.0         62           2
 M methionine          2.3         12           1
 N asparagine          3.1         16           1
 P proline             6.6         34           2
 Q glutamine           6.2         32           2
 R arginine            8.9         46           2
 S serine              5.2         27           2
 T threonine           5.2         27           2
 V valine              5.4         28           1
 W tryptophan          0.6          3           1
 Y tyrosine            2.9         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   seryl-tRNA synthetase 2 isoform b precursor 
SARS2                 0.937   seryl-tRNA synthetase 2 isoform a precursor 
SARS                  0.140   seryl-tRNA synthetase 
CEP250                0.010   centrosomal protein 2 
C21orf56              0.009   hypothetical protein LOC84221 isoform 1 
NUCB1                 0.008   nucleobindin 1 
GEMIN8                0.008   gem (nuclear organelle) associated protein 8 
GEMIN8                0.008   gem (nuclear organelle) associated protein 8 
GEMIN8                0.008   gem (nuclear organelle) associated protein 8 
FAM184B               0.008   hypothetical protein LOC27146 
TPM1                  0.008   tropomyosin 1 alpha chain isoform 5 
HOOK2                 0.008   hook homolog 2 isoform 2 
HOOK2                 0.008   hook homolog 2 isoform 1 
IVL                   0.007   involucrin 
CCHCR1                0.007   coiled-coil alpha-helical rod protein 1 isoform 1 [...
CCHCR1                0.007   coiled-coil alpha-helical rod protein 1 isoform 2 [...
CCHCR1                0.007   coiled-coil alpha-helical rod protein 1 isoform 3 [...
LOC100133758          0.007   PREDICTED: hypothetical protein, partial 
URB1                  0.007   nucleolar preribosomal-associated protein 1 
FYCO1                 0.006   FYVE and coiled-coil domain containing 1 
MAP4K4                0.006   mitogen-activated protein kinase kinase kinase kinas...
LOC732160             0.006   PREDICTED: similar to NADH dehydrogenase [ubiquinon...
KRT82                 0.006   keratin 82 
NDUFA10               0.006   NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1...
NUMA1                 0.006   nuclear mitotic apparatus protein 1 
PPL                   0.006   periplakin 
TFR2                  0.005   transferrin receptor 2 
CROCC                 0.005   ciliary rootlet coiled-coil 
TCOF1                 0.005   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.005   Treacher Collins-Franceschetti syndrome 1 isoform a ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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