Search of human proteins with 88971283

Search of human proteins with 88971283

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|88971283 PREDICTED: hypothetical protein [Homo sapiens]
         (199 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169165712 PREDICTED: hypothetical protein [Homo sapiens]           427   e-120
gi|88971283 PREDICTED: hypothetical protein [Homo sapiens]            427   e-120
gi|41146634 PREDICTED: hypothetical protein [Homo sapiens]            427   e-120
gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]                60   1e-09
gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]            39   0.003
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]           39   0.003
gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]           39   0.003
gi|239746769 PREDICTED: similar to Serine/threonine-protein kina...    39   0.003
gi|112789555 ADAM metallopeptidase with thrombospondin type 1 mo...    35   0.032
gi|115334682 SNAP25-interacting protein [Homo sapiens]                 35   0.042
gi|157266326 oculocutaneous albinism II [Homo sapiens]                 33   0.12 
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]            33   0.12 
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ...    33   0.12 
gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ...    33   0.12 
gi|239757743 PREDICTED: hypothetical protein [Homo sapiens]            32   0.36 
gi|169213965 PREDICTED: similar to hCG1645909 [Homo sapiens]           32   0.36 
gi|239755867 PREDICTED: hypothetical protein [Homo sapiens]            32   0.36 
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]            32   0.36 
gi|239752237 PREDICTED: hypothetical protein XP_002348168 [Homo ...    32   0.36 
gi|239751822 PREDICTED: similar to hCG1645909 [Homo sapiens]           32   0.36 
gi|239750351 PREDICTED: hypothetical protein XP_002347378 [Homo ...    32   0.36 
gi|239746757 PREDICTED: hypothetical protein XP_002343835 [Homo ...    32   0.36 
gi|239746313 PREDICTED: similar to hCG1645909 [Homo sapiens]           32   0.36 
gi|143770741 glycoprotein VI (platelet) isoform 1 [Homo sapiens]       31   0.61 
gi|116734702 homeobox D13 [Homo sapiens]                               31   0.61 
gi|57529222 basic helix-loop-helix domain containing, class B, 4...    31   0.61 
gi|54873602 hypothetical protein LOC220382 [Homo sapiens]              31   0.61 
gi|239754611 PREDICTED: hypothetical protein [Homo sapiens]            31   0.79 
gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo ...    31   0.79 
gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo ...    31   0.79 

>gi|169165712 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 199

 Score =  427 bits (1098), Expect = e-120
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA 60
           MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA
Sbjct: 1   MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA 60

Query: 61  DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120
           DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA
Sbjct: 61  DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120

Query: 121 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY 180
           WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY
Sbjct: 121 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY 180

Query: 181 ERSYRCSGNLFQWKKMLRW 199
           ERSYRCSGNLFQWKKMLRW
Sbjct: 181 ERSYRCSGNLFQWKKMLRW 199


>gi|88971283 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 199

 Score =  427 bits (1098), Expect = e-120
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA 60
           MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA
Sbjct: 1   MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA 60

Query: 61  DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120
           DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA
Sbjct: 61  DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120

Query: 121 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY 180
           WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY
Sbjct: 121 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY 180

Query: 181 ERSYRCSGNLFQWKKMLRW 199
           ERSYRCSGNLFQWKKMLRW
Sbjct: 181 ERSYRCSGNLFQWKKMLRW 199


>gi|41146634 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 199

 Score =  427 bits (1098), Expect = e-120
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA 60
           MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA
Sbjct: 1   MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA 60

Query: 61  DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120
           DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA
Sbjct: 61  DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120

Query: 121 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY 180
           WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY
Sbjct: 121 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY 180

Query: 181 ERSYRCSGNLFQWKKMLRW 199
           ERSYRCSGNLFQWKKMLRW
Sbjct: 181 ERSYRCSGNLFQWKKMLRW 199


>gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]
          Length = 1541

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 28/59 (47%), Positives = 36/59 (61%)

Query: 124 AGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSYER 182
           A  PP   L L+ GMP VC EQ++T+VG   PCV A +H V + K GC   +W V +ER
Sbjct: 30  ASVPPRPLLPLQPGMPHVCAEQELTLVGRRQPCVQALSHTVPVWKAGCGWQAWCVGHER 88


>gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 264

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 12/81 (14%)

Query: 54  AAAVPSADRRAAPASRALHQLLPDKPNFCA---GFGLAEPERRTARSPGGGQGGSASPRC 110
           A A P+A RR+ PA R    LLP     CA   G  L+ P R+   +    +G  AS   
Sbjct: 77  APAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALAS--- 133

Query: 111 PRDCGSGASAWAVAGWPPGSA 131
              CG  A  W  AGWPP +A
Sbjct: 134 ---CGLRA-GW--AGWPPQAA 148


>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
          Length = 317

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 12/81 (14%)

Query: 54  AAAVPSADRRAAPASRALHQLLPDKPNFCA---GFGLAEPERRTARSPGGGQGGSASPRC 110
           A A P+A RR+ PA R    LLP     CA   G  L+ P R+   +    +G  AS   
Sbjct: 71  APAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALAS--- 127

Query: 111 PRDCGSGASAWAVAGWPPGSA 131
              CG  A  W  AGWPP +A
Sbjct: 128 ---CGLRA-GW--AGWPPQAA 142


>gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]
          Length = 317

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 12/81 (14%)

Query: 54  AAAVPSADRRAAPASRALHQLLPDKPNFCA---GFGLAEPERRTARSPGGGQGGSASPRC 110
           A A P+A RR+ PA R    LLP     CA   G  L+ P R+   +    +G  AS   
Sbjct: 71  APAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALAS--- 127

Query: 111 PRDCGSGASAWAVAGWPPGSA 131
              CG  A  W  AGWPP +A
Sbjct: 128 ---CGLRA-GW--AGWPPQAA 142


>gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase
           PRKX (Protein kinase PKX1) [Homo sapiens]
          Length = 330

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 12/81 (14%)

Query: 54  AAAVPSADRRAAPASRALHQLLPDKPNFCA---GFGLAEPERRTARSPGGGQGGSASPRC 110
           A A P+A RR+ PA R    LLP     CA   G  L+ P R+   +    +G  AS   
Sbjct: 84  APAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALAS--- 140

Query: 111 PRDCGSGASAWAVAGWPPGSA 131
              CG  A  W  AGWPP +A
Sbjct: 141 ---CGLRA-GW--AGWPPQAA 155


>gi|112789555 ADAM metallopeptidase with thrombospondin type 1
           motif, 19 preproprotein [Homo sapiens]
          Length = 1207

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 92  RRTARSPGGGQGGSASPRCPRDCGSGASAWAVAGWPPGSALQLRLGMPSVCEE 144
           RR    P GG GGSA P   R  G G SA A A    GS+ ++R   P   EE
Sbjct: 44  RREPVDPAGGSGGSADPGWVRGVGGGGSARAQAA---GSSREVRSVAPVPLEE 93


>gi|115334682 SNAP25-interacting protein [Homo sapiens]
          Length = 1183

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 16/137 (11%)

Query: 19  APGG----AGACSSAATEPLGLARPLLALPDACD-ACWGQAAAVPSADRRAAPASRALHQ 73
           +PGG    AG+ S+A   P  L       P   + +  G    VP+ D        A+ +
Sbjct: 522 SPGGKTRSAGSASTAGAPPSEL------FPGPGERSLVGFGPPVPAKDTETRERMEAMEK 575

Query: 74  LLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSG---ASAWAVAGWPPGS 130
            +           L   E  T      G  G+A+P  P  CGSG   + A  V+G PP S
Sbjct: 576 QIASLTGLVQSALLRGSEPETPSEKIEGSNGAATPSAP--CGSGGRSSGATPVSGPPPPS 633

Query: 131 ALQLRLGMPSVCEEQQV 147
           A     G P+     Q+
Sbjct: 634 ASSTPAGQPTAVSRLQM 650


>gi|157266326 oculocutaneous albinism II [Homo sapiens]
          Length = 838

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 61  DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120
           D R  P + A+  L    P+     GLAE      R P G  G   S  CPR   +G S+
Sbjct: 7   DGRRYPGAPAVELLQTSVPS-----GLAELVAGKRRLPRGAGGADPSHSCPRG-AAGQSS 60

Query: 121 WAVAG 125
           WA AG
Sbjct: 61  WAPAG 65


>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 336

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 86  GLAEPERRTARSPGGGQGGSASPRCPRDCGSGASAWAVA--GWPPGSALQLRLGMPSVC 142
           G   P  R+ RS G G+     P      G+G S WA A  GWP  S+      +P  C
Sbjct: 228 GPGPPALRSGRSRGSGR----PPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC 282


>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
           sapiens]
          Length = 336

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 86  GLAEPERRTARSPGGGQGGSASPRCPRDCGSGASAWAVA--GWPPGSALQLRLGMPSVC 142
           G   P  R+ RS G G+     P      G+G S WA A  GWP  S+      +P  C
Sbjct: 228 GPGPPALRSGRSRGSGR----PPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC 282


>gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
           sapiens]
          Length = 321

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 86  GLAEPERRTARSPGGGQGGSASPRCPRDCGSGASAWAVA--GWPPGSALQLRLGMPSVC 142
           G   P  R+ RS G G+     P      G+G S WA A  GWP  S+      +P  C
Sbjct: 228 GPGPPALRSGRSRGSGR----PPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC 282


>gi|239757743 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 93  RTARSPGGGQGGSASPRCPRDCGSGASAWAVAGW---PPG 129
           RT       QG    PRCP   G+  S    AGW   PPG
Sbjct: 135 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPG 174


>gi|169213965 PREDICTED: similar to hCG1645909 [Homo sapiens]
          Length = 591

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 7/47 (14%)

Query: 87  LAEPERRTARSP---GGGQGGSASP-RCPRDCGSGASAWAVAGWPPG 129
           L +PE+  A SP   G G GG+ +P RCP  CG    A   +  PPG
Sbjct: 153 LNKPEKLVAPSPDQKGSGTGGTTTPPRCPDSCGHPRPA---SSSPPG 196


>gi|239755867 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 93

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 30/85 (35%), Positives = 34/85 (40%), Gaps = 4/85 (4%)

Query: 22  GAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSADR---RAAPASRALHQLLPDK 78
           G G      T+PL  A    ALP       GQAAA   A +    AA    A+  +L   
Sbjct: 5   GGGRAEPRFTKPLPRACIPAALPCGPQTR-GQAAAGSGARQFGPHAASRRAAVQGVLGGA 63

Query: 79  PNFCAGFGLAEPERRTARSPGGGQG 103
           P FCA  G   P  R  R    GQG
Sbjct: 64  PRFCASEGAGGPLPRLGRLLPSGQG 88


>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 380

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 46/160 (28%), Positives = 62/160 (38%), Gaps = 22/160 (13%)

Query: 3   PGLRGLL----GHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDAC-WGQAAAV 57
           PG RG L    G  A +  +A     A  S     +G  + + A   A  A   G   A 
Sbjct: 117 PGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHAS 176

Query: 58  PSADRRAAPASRALHQLL-----PDKPNFCAGFGLAEPERRTA--RSPGGGQGGSASPRC 110
           P A R A  A R+  +LL     P +P          P RR+   R  GG  G   + R 
Sbjct: 177 PGARRPAPGARRSRPRLLRPASPPPRP---------APRRRSTAPRHEGGRPGRGRTRRQ 227

Query: 111 PRDCGSGASAWAVAGWPPGSALQLRLGMP-SVCEEQQVTV 149
           P   G+G +   + G   G  L  R G P + C   QV++
Sbjct: 228 PHLAGAGCARLELEGARMGERLHRRQGAPETACIHLQVSI 267


>gi|239752237 PREDICTED: hypothetical protein XP_002348168 [Homo
           sapiens]
          Length = 217

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 93  RTARSPGGGQGGSASPRCPRDCGSGASAWAVAGW---PPG 129
           RT       QG    PRCP   G+  S    AGW   PPG
Sbjct: 117 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPG 156


>gi|239751822 PREDICTED: similar to hCG1645909 [Homo sapiens]
          Length = 591

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 7/47 (14%)

Query: 87  LAEPERRTARSP---GGGQGGSASP-RCPRDCGSGASAWAVAGWPPG 129
           L +PE+  A SP   G G GG+ +P RCP  CG    A   +  PPG
Sbjct: 153 LNKPEKLVAPSPDQKGSGTGGTTTPPRCPDSCGHPRPA---SSSPPG 196


>gi|239750351 PREDICTED: hypothetical protein XP_002347378 [Homo
           sapiens]
          Length = 93

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 30/85 (35%), Positives = 34/85 (40%), Gaps = 4/85 (4%)

Query: 22  GAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSADR---RAAPASRALHQLLPDK 78
           G G      T+PL  A    ALP       GQAAA   A +    AA    A+  +L   
Sbjct: 5   GGGRAEPRFTKPLPRACIPAALPCGPQTR-GQAAAGSGARQFGPHAASRRAAVQGVLGGA 63

Query: 79  PNFCAGFGLAEPERRTARSPGGGQG 103
           P FCA  G   P  R  R    GQG
Sbjct: 64  PRFCASEGAGGPLPRLGRLLPSGQG 88


>gi|239746757 PREDICTED: hypothetical protein XP_002343835 [Homo
           sapiens]
          Length = 281

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 93  RTARSPGGGQGGSASPRCPRDCGSGASAWAVAGW---PPG 129
           RT       QG    PRCP   G+  S    AGW   PPG
Sbjct: 181 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPG 220


>gi|239746313 PREDICTED: similar to hCG1645909 [Homo sapiens]
          Length = 591

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 7/47 (14%)

Query: 87  LAEPERRTARSP---GGGQGGSASP-RCPRDCGSGASAWAVAGWPPG 129
           L +PE+  A SP   G G GG+ +P RCP  CG    A   +  PPG
Sbjct: 153 LNKPEKLVAPSPDQKGSGTGGTTTPPRCPDSCGHPRPA---SSSPPG 196


>gi|143770741 glycoprotein VI (platelet) isoform 1 [Homo sapiens]
          Length = 620

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 7/101 (6%)

Query: 37  ARPLLALPDACDACWGQAAAVPSADRRAAPASRALHQLLPDKPNFCAGFGLAEPERR-TA 95
           +R + A P   D+  G++   P    +  P         P+ P   +G GLA+PE    A
Sbjct: 244 SRSITASPKESDSPAGESC--PPVLHQGQPGPDMPRGCDPNNPGGVSGRGLAQPEEAPAA 301

Query: 96  RSPGGGQGGSASPRCPRDCGSGASAWAVAGWPPGSALQLRL 136
           +  G  +  SA P  P D          +GW P    Q R+
Sbjct: 302 QGQGCAEAASAPPAPPAD----PEITRGSGWRPTGCSQPRV 338


>gi|116734702 homeobox D13 [Homo sapiens]
          Length = 343

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 32/118 (27%), Positives = 43/118 (36%), Gaps = 18/118 (15%)

Query: 19  APGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSADRRAAPASRALHQLLPDK 78
           AP  + + S AA    G  R  L+ P       G+AAA  +A   AA A+          
Sbjct: 22  APASSSSSSVAAAAASGQCRGFLSAPVFAGTHSGRAAAAAAAAAAAAAAA---------- 71

Query: 79  PNFCAGFGLAEPERRTARSPGGGQGG--SASPRCP--RDCGSGASAWAVAGWPPGSAL 132
               +GF       RT  S         +A P  P  ++C +   A A A  P   AL
Sbjct: 72  ----SGFAYPGTSERTGSSSSSSSSAVVAARPEAPPAKECPAPTPAAAAAAPPSAPAL 125


>gi|57529222 basic helix-loop-helix domain containing, class B, 4
           [Homo sapiens]
          Length = 225

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 32/107 (29%), Positives = 36/107 (33%), Gaps = 16/107 (14%)

Query: 5   LRGLLG--HWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSADR 62
           L+ L G  + A S   A   AG    AA EP              +A  G     P  D 
Sbjct: 4   LKSLSGDAYLALSHGYAAAAAGLAYGAAREP--------------EAARGYGTPGPGGDL 49

Query: 63  RAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPR 109
            AAPA RA  Q              A  +RR  R PG    G   PR
Sbjct: 50  PAAPAPRAPAQAAESSGEQSGDEDDAFEQRRRRRGPGSAADGRRRPR 96


>gi|54873602 hypothetical protein LOC220382 [Homo sapiens]
          Length = 426

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 11/115 (9%)

Query: 16  VSVAPGGAGACSSAATEPLGLARPLLA--LPDACDACWGQAAAVPSADRRAAPAS---RA 70
           +  AP G  + S+A T      RPL A   P       G+AA    A + AA AS   R+
Sbjct: 108 MGAAPPGPPSPSAADTPA---KRPLAAPSAPTVAAPAHGKAAPRREASQAAAAASLQSRS 164

Query: 71  LHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASAWAVAG 125
           L  L     +   G   AEP      +P  G GG+ +     D    A A A+ G
Sbjct: 165 LAALFDSLRHVPGG---AEPAGGEVAAPAAGLGGAGTGGAGGDVAGPAGATAIPG 216


>gi|239754611 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 178

 Score = 30.8 bits (68), Expect = 0.79
 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 13/71 (18%)

Query: 37  ARPLLALPDACDACWGQAAAVPSADRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTAR 96
           ARP    P+A  A  G+AA +  A +R APA +A H           G G   P R+   
Sbjct: 97  ARPPTGAPEA-PALSGRAARLHGA-QRGAPAGQARH-----------GAGNRHPPRQGQE 143

Query: 97  SPGGGQGGSAS 107
             GGG GG  S
Sbjct: 144 EDGGGCGGRDS 154


>gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo
           sapiens]
          Length = 178

 Score = 30.8 bits (68), Expect = 0.79
 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 13/71 (18%)

Query: 37  ARPLLALPDACDACWGQAAAVPSADRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTAR 96
           ARP    P+A  A  G+AA +  A +R APA +A H           G G   P R+   
Sbjct: 97  ARPPTGAPEA-PALSGRAARLHGA-QRGAPAGQARH-----------GAGNRHPPRQGQE 143

Query: 97  SPGGGQGGSAS 107
             GGG GG  S
Sbjct: 144 EDGGGCGGRDS 154


>gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo
           sapiens]
          Length = 178

 Score = 30.8 bits (68), Expect = 0.79
 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 13/71 (18%)

Query: 37  ARPLLALPDACDACWGQAAAVPSADRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTAR 96
           ARP    P+A  A  G+AA +  A +R APA +A H           G G   P R+   
Sbjct: 97  ARPPTGAPEA-PALSGRAARLHGA-QRGAPAGQARH-----------GAGNRHPPRQGQE 143

Query: 97  SPGGGQGGSAS 107
             GGG GG  S
Sbjct: 144 EDGGGCGGRDS 154


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.463 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,992,485
Number of Sequences: 37866
Number of extensions: 547136
Number of successful extensions: 2468
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 2394
Number of HSP's gapped (non-prelim): 182
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.