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Search of human proteins with 88900505
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|88900505 tyrosine hydroxylase isoform c [Homo sapiens]
(524 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|88900505 tyrosine hydroxylase isoform c [Homo sapiens] 1051 0.0
gi|88900501 tyrosine hydroxylase isoform a [Homo sapiens] 1046 0.0
gi|88900503 tyrosine hydroxylase isoform b [Homo sapiens] 978 0.0
gi|4557819 phenylalanine hydroxylase [Homo sapiens] 452 e-127
gi|31795563 tryptophan hydroxylase 2 [Homo sapiens] 438 e-123
gi|4759248 tryptophan hydroxylase 1 [Homo sapiens] 434 e-122
gi|33188461 GATA binding protein 4 [Homo sapiens] 37 0.044
gi|118402590 myosin XV [Homo sapiens] 37 0.058
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 36 0.075
gi|4503843 adaptor-related protein complex 1, gamma 2 subunit [H... 35 0.13
gi|18079216 CASK interacting protein 1 [Homo sapiens] 35 0.22
gi|196115290 glial fibrillary acidic protein isoform 2 [Homo sap... 35 0.22
gi|4503979 glial fibrillary acidic protein isoform 1 [Homo sapiens] 35 0.22
gi|112821690 G protein-regulated inducer of neurite outgrowth 3 ... 35 0.22
gi|102469037 jun D proto-oncogene [Homo sapiens] 34 0.29
gi|118498339 EMI domain containing 2 [Homo sapiens] 34 0.29
gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens] 34 0.37
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 34 0.37
gi|46249414 latent transforming growth factor beta binding prote... 33 0.64
gi|18426913 drebrin 1 isoform b [Homo sapiens] 33 0.64
gi|18426915 drebrin 1 isoform a [Homo sapiens] 33 0.64
gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo ... 33 0.83
gi|224586846 sorbin and SH3 domain containing 2 isoform 4 [Homo ... 33 0.83
gi|126722969 centromere protein T [Homo sapiens] 33 0.83
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 33 0.83
gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens] 33 0.83
gi|188497618 connector enhancer of kinase suppressor of Ras 1 [H... 33 0.83
gi|21359951 RNA binding motif protein 42 [Homo sapiens] 32 1.1
gi|115511030 hypothetical protein LOC115004 [Homo sapiens] 32 1.1
gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Hom... 32 1.4
>gi|88900505 tyrosine hydroxylase isoform c [Homo sapiens]
Length = 524
Score = 1051 bits (2719), Expect = 0.0
Identities = 524/524 (100%), Positives = 524/524 (100%)
Query: 1 MPTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPR 60
MPTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPR
Sbjct: 1 MPTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPR 60
Query: 61 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKP 120
FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKP
Sbjct: 61 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKP 120
Query: 121 SALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSE 180
SALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSE
Sbjct: 121 SALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSE 180
Query: 181 DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQY 240
DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQY
Sbjct: 181 DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQY 240
Query: 241 RHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLE 300
RHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLE
Sbjct: 241 RHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLE 300
Query: 301 DVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELL 360
DVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELL
Sbjct: 301 DVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELL 360
Query: 361 GHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLL 420
GHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLL
Sbjct: 361 GHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLL 420
Query: 421 SSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQR 480
SSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQR
Sbjct: 421 SSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQR 480
Query: 481 PFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG 524
PFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG
Sbjct: 481 PFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG 524
>gi|88900501 tyrosine hydroxylase isoform a [Homo sapiens]
Length = 528
Score = 1046 bits (2704), Expect = 0.0
Identities = 524/528 (99%), Positives = 524/528 (99%), Gaps = 4/528 (0%)
Query: 1 MPTPDATTPQAKGFRRAVSELDAKQAEAIM----GAPGPSLTGSPWPGTAAPAASYTPTP 56
MPTPDATTPQAKGFRRAVSELDAKQAEAIM GAPGPSLTGSPWPGTAAPAASYTPTP
Sbjct: 1 MPTPDATTPQAKGFRRAVSELDAKQAEAIMVRGQGAPGPSLTGSPWPGTAAPAASYTPTP 60
Query: 57 RSPRFIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPR 116
RSPRFIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPR
Sbjct: 61 RSPRFIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPR 120
Query: 117 ATKPSALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVR 176
ATKPSALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVR
Sbjct: 121 ATKPSALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVR 180
Query: 177 QVSEDVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEI 236
QVSEDVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEI
Sbjct: 181 QVSEDVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEI 240
Query: 237 AFQYRHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNI 296
AFQYRHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNI
Sbjct: 241 AFQYRHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNI 300
Query: 297 PQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCC 356
PQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCC
Sbjct: 301 PQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCC 360
Query: 357 HELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYG 416
HELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYG
Sbjct: 361 HELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYG 420
Query: 417 AGLLSSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYAS 476
AGLLSSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYAS
Sbjct: 421 AGLLSSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYAS 480
Query: 477 RIQRPFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG 524
RIQRPFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG
Sbjct: 481 RIQRPFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG 528
>gi|88900503 tyrosine hydroxylase isoform b [Homo sapiens]
Length = 497
Score = 978 bits (2529), Expect = 0.0
Identities = 497/524 (94%), Positives = 497/524 (94%), Gaps = 27/524 (5%)
Query: 1 MPTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPR 60
MPTPDATTPQAKGFRRAVSELDAKQAEAIM SPR
Sbjct: 1 MPTPDATTPQAKGFRRAVSELDAKQAEAIM---------------------------SPR 33
Query: 61 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKP 120
FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKP
Sbjct: 34 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKP 93
Query: 121 SALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSE 180
SALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSE
Sbjct: 94 SALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSE 153
Query: 181 DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQY 240
DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQY
Sbjct: 154 DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQY 213
Query: 241 RHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLE 300
RHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLE
Sbjct: 214 RHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLE 273
Query: 301 DVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELL 360
DVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELL
Sbjct: 274 DVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELL 333
Query: 361 GHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLL 420
GHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLL
Sbjct: 334 GHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLL 393
Query: 421 SSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQR 480
SSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQR
Sbjct: 394 SSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQR 453
Query: 481 PFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG 524
PFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG
Sbjct: 454 PFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG 497
>gi|4557819 phenylalanine hydroxylase [Homo sapiens]
Length = 452
Score = 452 bits (1163), Expect = e-127
Identities = 224/423 (52%), Positives = 300/423 (70%), Gaps = 14/423 (3%)
Query: 109 LNLLFSPRATKPSALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDL 168
++L+FS + + AL++ +++FE + + H+E+RP++ + E+F L+ R L
Sbjct: 35 ISLIFSLKE-EVGALAKVLRLFEENDVNLTHIESRPSRLKK---DEYEFFTHLDKR--SL 88
Query: 169 AALLSGVRQVSEDV--------RSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPG 220
AL + ++ + D+ R VPWFPR + ELD+ + + + +LD DHPG
Sbjct: 89 PALTNIIKILRHDIGATVHELSRDKKKDTVPWFPRTIQELDRFANQILSYGAELDADHPG 148
Query: 221 FSDQVYRQRRKLIAEIAFQYRHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLE 280
F D VYR RRK A+IA+ YRHG PIPRVEY EE TW V+ TLK LY THAC E+
Sbjct: 149 FKDPVYRARRKQFADIAYNYRHGQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNH 208
Query: 281 AFALLERFSGYREDNIPQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQY 340
F LLE++ G+ EDNIPQLEDVS+FL+ TGF+LRPVAGLLS+RDFL LAFRVF CTQY
Sbjct: 209 IFPLLEKYCGFHEDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQY 268
Query: 341 IRHASSPMHSPEPDCCHELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFT 400
IRH S PM++PEPD CHELLGHVP+ +DR+FAQFSQ+IGLASLGA DE IEKL+T+YWFT
Sbjct: 269 IRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFT 328
Query: 401 VEFGLCKQNGEVKAYGAGLLSSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFV 460
VEFGLCKQ +KAYGAGLLSS+GEL +CLSE+P++ + E A+Q Y +Q +Y+V
Sbjct: 329 VEFGLCKQGDSIKAYGAGLLSSFGELQYCLSEKPKLLPLELEKTAIQNYTVTEFQPLYYV 388
Query: 461 SESFSDAKDKLRSYASRIQRPFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHAL 520
+ESF+DAK+K+R++A+ I RPFSV++DPYT I+VLD+ Q ++ + + E+ L AL
Sbjct: 389 AESFNDAKEKVRNFAATIPRPFSVRYDPYTQRIEVLDNTQQLKILADSINSEIGILCSAL 448
Query: 521 SAI 523
I
Sbjct: 449 QKI 451
>gi|31795563 tryptophan hydroxylase 2 [Homo sapiens]
Length = 490
Score = 438 bits (1127), Expect = e-123
Identities = 215/409 (52%), Positives = 290/409 (70%), Gaps = 13/409 (3%)
Query: 123 LSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVR-QVSED 181
L +A+++F+ + H+E+R ++R + +E FV E + + L+ ++ Q +
Sbjct: 77 LVKALRLFQEKRVNMVHIESRKSRRRSS---EVEIFVDCECGKTEFNELIQLLKFQTTIV 133
Query: 182 VRSPAG---------PKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKL 232
+P VPWFPRK+SELDKC H V + +LD DHPGF D VYRQRRK
Sbjct: 134 TLNPPENIWTEEEELEDVPWFPRKISELDKCSHRVLMYGSELDADHPGFKDNVYRQRRKY 193
Query: 233 IAEIAFQYRHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYR 292
++A Y++G PIPRVEYT EE TW V+ L LY THAC E+L+ F LL ++ GYR
Sbjct: 194 FVDVAMGYKYGQPIPRVEYTEEETKTWGVVFRELSKLYPTHACREYLKNFPLLTKYCGYR 253
Query: 293 EDNIPQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPE 352
EDN+PQLEDVS FLKER+GF +RPVAG LS RDFLA LA+RVF CTQYIRH S P+++PE
Sbjct: 254 EDNVPQLEDVSMFLKERSGFTVRPVAGYLSPRDFLAGLAYRVFHCTQYIRHGSDPLYTPE 313
Query: 353 PDCCHELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEV 412
PD CHELLGHVP+LAD FAQFSQ+IGLASLGASDE+++KL+T Y+FT+EFGLCKQ G++
Sbjct: 314 PDTCHELLGHVPLLADPKFAQFSQEIGLASLGASDEDVQKLATCYFFTIEFGLCKQEGQL 373
Query: 413 KAYGAGLLSSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLR 472
+AYGAGLLSS GEL H LS++ ++AFDP+ +Q T+Q YFVSESF +AK+K+R
Sbjct: 374 RAYGAGLLSSIGELKHALSDKACVKAFDPKTTCLQECLITTFQEAYFVSESFEEAKEKMR 433
Query: 473 SYASRIQRPFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALS 521
+A I RPFSV F+PYT +I++L +++ ++ ++ +L+T+ AL+
Sbjct: 434 DFAKSITRPFSVYFNPYTQSIEILKDTRSIENVVQDLRSDLNTVCDALN 482
>gi|4759248 tryptophan hydroxylase 1 [Homo sapiens]
Length = 444
Score = 434 bits (1117), Expect = e-122
Identities = 213/424 (50%), Positives = 293/424 (69%), Gaps = 14/424 (3%)
Query: 110 NLLFSPRATKPSALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRR---G 166
+L+FS + + L +A+K+F+ + H+E+R ++R + E FV ++ R
Sbjct: 19 SLIFSLK-NEVGGLIKALKIFQEKHVNLLHIESRKSKRRNS---EFEIFVDCDINREQLN 74
Query: 167 DLAALLSGVRQVSE-------DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHP 219
D+ LL V ++ VPWFP+K+S+LD C + V + +LD DHP
Sbjct: 75 DIFHLLKSHTNVLSVNLPDNFTLKEDGMETVPWFPKKISDLDHCANRVLMYGSELDADHP 134
Query: 220 GFSDQVYRQRRKLIAEIAFQYRHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHL 279
GF D VYR+RRK A++A Y+HGDPIP+VE+T EEI TW V+ L LY THAC E+L
Sbjct: 135 GFKDNVYRKRRKYFADLAMNYKHGDPIPKVEFTEEEIKTWGTVFQELNKLYPTHACREYL 194
Query: 280 EAFALLERFSGYREDNIPQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQ 339
+ LL ++ GYREDNIPQLEDVS FLKERTGF +RPVAG LS RDFL+ LAFRVF CTQ
Sbjct: 195 KNLPLLSKYCGYREDNIPQLEDVSNFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQ 254
Query: 340 YIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWF 399
Y+RH+S P ++PEPD CHELLGHVP+LA+ +FAQFSQ+IGLASLGAS+E ++KL+T Y+F
Sbjct: 255 YVRHSSDPFYTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASEEAVQKLATCYFF 314
Query: 400 TVEFGLCKQNGEVKAYGAGLLSSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYF 459
TVEFGLCKQ+G+++ +GAGLLSS EL H LS +++ FDP+ Q T+Q VYF
Sbjct: 315 TVEFGLCKQDGQLRVFGAGLLSSISELKHALSGHAKVKPFDPKITCKQECLITTFQDVYF 374
Query: 460 VSESFSDAKDKLRSYASRIQRPFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHA 519
VSESF DAK+K+R + I+RPF VK++PYT +I +L +++ ++ +Q +LD ++ A
Sbjct: 375 VSESFEDAKEKMREFTKTIKRPFGVKYNPYTRSIQILKDTKSITSAMNELQHDLDVVSDA 434
Query: 520 LSAI 523
L+ +
Sbjct: 435 LAKV 438
>gi|33188461 GATA binding protein 4 [Homo sapiens]
Length = 442
Score = 37.0 bits (84), Expect = 0.044
Identities = 33/83 (39%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 28 AIMGAPGPSLTGSP-WPGTAAPAASYTPTPRSPRFI--GRRQSLIEDARKEREAAVAAAA 84
A GA + GSP W A A+YTP P SPRF G SL A AA A A
Sbjct: 74 AASGAGPGTQQGSPGWSQAGADGAAYTPPPVSPRFSFPGTTGSLAAAA----AAAAAREA 129
Query: 85 AAVPSEPGDPLEAVAFEEKEGKA 107
AA S G +A E+ G+A
Sbjct: 130 AAYSSGGGAAGAGLAGREQYGRA 152
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 36.6 bits (83), Expect = 0.058
Identities = 51/187 (27%), Positives = 70/187 (37%), Gaps = 25/187 (13%)
Query: 11 AKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPRFIGRRQ-SLI 69
A GF A ++A + + +P PSL SP G +P A P+P+ G Q +
Sbjct: 754 AFGFPGASPRASRRRAWSPLASPQPSLRSSPGLGYCSPLA--PPSPQLSLRTGPFQPPFL 811
Query: 70 EDARKER---EAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKPSALSRA 126
AR+ R E+ AA PG PL + L L SPR + + SR
Sbjct: 812 PPARRPRSLQESPAPRRAAGRLGPPGSPLPG---SPRPPSPPLGLCHSPRRSSLNLPSR- 867
Query: 127 VKVFETFEAKIHHLETRPAQRP-RAGGPHLEYFVRLEVRRGDLAALLSGVRQVSEDVRSP 185
+ H R ++ P RA P VRL R A + E R P
Sbjct: 868 ----------LPHTWRRLSEPPTRAVKPQ----VRLPFHRPPRAGAWRAPLEHRESPREP 913
Query: 186 AGPKVPW 192
+ PW
Sbjct: 914 EDSETPW 920
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 36.2 bits (82), Expect = 0.075
Identities = 49/193 (25%), Positives = 62/193 (32%), Gaps = 13/193 (6%)
Query: 1 MPTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPR 60
+PTP+ T A A P P P A+ PTP P
Sbjct: 1059 VPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPA 1118
Query: 61 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKP 120
S E A AAA P EP P AV E+ A + + + P
Sbjct: 1119 ------SPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASP 1172
Query: 121 SALSRAVKVFETFEAKIHHLE--TRPA---QRPRAGGPHLEYFV--RLEVRRGDLAALLS 173
+A +F A + LE T PA P A LE F V + A L+
Sbjct: 1173 AAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLA 1232
Query: 174 GVRQVSEDVRSPA 186
E+ SPA
Sbjct: 1233 AAVSNPEEPTSPA 1245
Score = 31.6 bits (70), Expect = 1.9
Identities = 29/100 (29%), Positives = 37/100 (37%), Gaps = 9/100 (9%)
Query: 22 DAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPRFIGRRQSLIEDARKEREAAVA 81
DA A G S+ P P A A+ P P + SL E+ V
Sbjct: 845 DALDAALPSPEEGTSIAAVPAPEGTAVVAALVPFPHEDILVASIVSLEEED-------VT 897
Query: 82 AAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKPS 121
AAA + P P AV EG A + + SP T P+
Sbjct: 898 AAAVSAPERATVP--AVTVSVPEGTAAVAAVSSPEETAPA 935
Score = 31.2 bits (69), Expect = 2.4
Identities = 37/146 (25%), Positives = 48/146 (32%), Gaps = 28/146 (19%)
Query: 2 PTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPGTAAPA------------ 49
P TP+ F + A A + P P + SP PA
Sbjct: 1133 PAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAESASFAAVVATL 1192
Query: 50 ------ASYTPTPRSPRFIGRRQSLIEDARK---EREAAVAAAAAAVPSEPGDPLEAV-A 99
A+ PTP + + + A E A AAA + P EP P AV
Sbjct: 1193 EEPTSPAASVPTPAA--MVATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPT 1250
Query: 100 FEEKEGKAVLNL----LFSPRATKPS 121
EE A L L SP A+ P+
Sbjct: 1251 LEEPTSSAAAVLTPEELSSPAASVPT 1276
>gi|4503843 adaptor-related protein complex 1, gamma 2 subunit [Homo
sapiens]
Length = 785
Score = 35.4 bits (80), Expect = 0.13
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 70 EDARKEREAAVAAAAAAVPSEP----------------GDPLEAVAFEEKEGKAVLNLLF 113
E+A++ +EAA + AA VP+EP GD + G A+++LL
Sbjct: 597 EEAKESKEAAQLSEAAPVPTEPQASQLLDLLDLLDGASGDVQHPPHLDPSPGGALVHLLD 656
Query: 114 SPRATKPSALSRAVKVFETFEAKIHHLETRPAQRP 148
P P A +KVFE +++ RP + P
Sbjct: 657 LPCVPPPPAPIPDLKVFEREGVQLNLSFIRPPENP 691
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 34.7 bits (78), Expect = 0.22
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 24 KQAEAIMGAPGPSLTGSPWPGTAA-PAASYTPTPRSPRFIGRRQS---------LIEDAR 73
K +A+ G P S SP P A P A+ P +P +G + L A+
Sbjct: 1282 KPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAK 1341
Query: 74 KEREAAVAAAAAAVPSEP 91
R AA AAAAAA P P
Sbjct: 1342 PPRAAAAAAAAAAAPPAP 1359
>gi|196115290 glial fibrillary acidic protein isoform 2 [Homo
sapiens]
Length = 431
Score = 34.7 bits (78), Expect = 0.22
Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 18/150 (12%)
Query: 32 APGPSLTGSPWPGTAAPAASYTPTPRSPRFIGRRQSLIEDARKEREAAVAAAAAAVPSEP 91
APG L PGT A P P R + KE A+ A +
Sbjct: 26 APGRRLG----PGTRLSLARMPP-PLPTRVDFSLAGALNAGFKETRASERAEMMELNDRF 80
Query: 92 GDPLEAVAFEEKEGKAVLNLLFSPRATKPSALSRAVKVFETFEAKIHHLETRPAQRPRAG 151
+E V F E++ KA+ L RA +P+ L+ + ++A++ L R Q
Sbjct: 81 ASYIEKVRFLEQQNKALAAELNQLRAKEPTKLA------DVYQAELRELRLRLDQLTANS 134
Query: 152 GPHLEYFVRLEVRRGDLAALLSGVRQVSED 181
RLEV R +LA L+ VRQ +D
Sbjct: 135 A-------RLEVERDNLAQDLATVRQKLQD 157
>gi|4503979 glial fibrillary acidic protein isoform 1 [Homo sapiens]
Length = 432
Score = 34.7 bits (78), Expect = 0.22
Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 18/150 (12%)
Query: 32 APGPSLTGSPWPGTAAPAASYTPTPRSPRFIGRRQSLIEDARKEREAAVAAAAAAVPSEP 91
APG L PGT A P P R + KE A+ A +
Sbjct: 26 APGRRLG----PGTRLSLARMPP-PLPTRVDFSLAGALNAGFKETRASERAEMMELNDRF 80
Query: 92 GDPLEAVAFEEKEGKAVLNLLFSPRATKPSALSRAVKVFETFEAKIHHLETRPAQRPRAG 151
+E V F E++ KA+ L RA +P+ L+ + ++A++ L R Q
Sbjct: 81 ASYIEKVRFLEQQNKALAAELNQLRAKEPTKLA------DVYQAELRELRLRLDQLTANS 134
Query: 152 GPHLEYFVRLEVRRGDLAALLSGVRQVSED 181
RLEV R +LA L+ VRQ +D
Sbjct: 135 A-------RLEVERDNLAQDLATVRQKLQD 157
>gi|112821690 G protein-regulated inducer of neurite outgrowth 3
[Homo sapiens]
Length = 776
Score = 34.7 bits (78), Expect = 0.22
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 2 PTPDATTPQAKGFRRAVSE-LDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPR 60
PTP +P K + E K A ++ P SP G P+ S +PR P
Sbjct: 580 PTP---SPIRKNQESTLEENRQTKTATSLSLPSDPMGDSSPGSGKKTPSRSVKASPRRP- 635
Query: 61 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEK 103
S + + KE++ V AAAA V PGD + + + K
Sbjct: 636 ------SRVSEFLKEQKLNVTAAAAQVGLTPGDKKKQLGADSK 672
>gi|102469037 jun D proto-oncogene [Homo sapiens]
Length = 347
Score = 34.3 bits (77), Expect = 0.29
Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 13/94 (13%)
Query: 11 AKGFRRAVSELD----------AKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPR 60
A+GF +A+ +L A A A G P + TGS PG APAA+ P +P
Sbjct: 137 AEGFVKALEDLHKQNQLGAGAAAAAAAAAAGGPSGTATGSAPPGELAPAAA---APEAPV 193
Query: 61 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDP 94
+ A VA AA VP P P
Sbjct: 194 YANLSSYAGGAGGAGGAATVAFAAEPVPFPPPPP 227
>gi|118498339 EMI domain containing 2 [Homo sapiens]
Length = 439
Score = 34.3 bits (77), Expect = 0.29
Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 2 PTPDATTPQAKGFRRAVSELDAKQAEAIMGAPG----PSLTGSPW-PGTAAPAASYTPTP 56
P A P +KG R E ++G PG P G P PG PA + P+P
Sbjct: 207 PPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGNPGPSP 266
Query: 57 RSPRFIGRRQSLIEDARKER------EAAVAAAAAAVPSEPGDP 94
SP+ G SL K+ A V A VP G P
Sbjct: 267 NSPQ--GALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPP 308
>gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]
Length = 617
Score = 33.9 bits (76), Expect = 0.37
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 2 PTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPG-TAAPAASYTPTP 56
P P +T + G + + A A +P P+ T SP P T +PA +YTP+P
Sbjct: 300 PVPASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSP 355
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 33.9 bits (76), Expect = 0.37
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 2 PTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPG-TAAPAASYTPTP 56
P P +T + G + + A A +P P+ T SP P T +PA +YTP+P
Sbjct: 410 PVPASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSP 465
>gi|46249414 latent transforming growth factor beta binding protein
1 isoform LTBP-1L [Homo sapiens]
Length = 1722
Score = 33.1 bits (74), Expect = 0.64
Identities = 30/87 (34%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 41 PWPGTAAPAASYTPTPRSPRFIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAF 100
P PG AA A + PRS F ++ +AR R +A AA A + PG P E
Sbjct: 34 PGPGLAAGALPLSGPPRSRTF-----NVALNARYSRSSA--AAGAPSRASPGVPSERTRR 86
Query: 101 EEKEGKAVLNLLFSPRATKPSALSRAV 127
K G A L L P P AV
Sbjct: 87 TSKPGGAALQGLRPPPPPPPEPARPAV 113
>gi|18426913 drebrin 1 isoform b [Homo sapiens]
Length = 651
Score = 33.1 bits (74), Expect = 0.64
Identities = 35/135 (25%), Positives = 47/135 (34%), Gaps = 31/135 (22%)
Query: 6 ATTPQAKGFRRAVSELDAKQAEAIMGAPGPSL-TGSPWP-------GTAAPAASYTPTPR 57
A+TP A+ RA+ E+ + Q + P P+ T P P AAP A P
Sbjct: 346 ASTPVAEQIERALDEVTSSQPPPLPPPPPPAQETQEPSPILDSEETRAAAPQAWAGPMEE 405
Query: 58 SPRFIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRA 117
P+ A A P PG P E + F E +AVL P
Sbjct: 406 PPQ-----------------------AQAPPRGPGSPAEDLMFMESAEQAVLAAPVEPAT 442
Query: 118 TKPSALSRAVKVFET 132
+ + A ET
Sbjct: 443 ADATEIHDAADTIET 457
>gi|18426915 drebrin 1 isoform a [Homo sapiens]
Length = 649
Score = 33.1 bits (74), Expect = 0.64
Identities = 35/135 (25%), Positives = 47/135 (34%), Gaps = 31/135 (22%)
Query: 6 ATTPQAKGFRRAVSELDAKQAEAIMGAPGPSL-TGSPWP-------GTAAPAASYTPTPR 57
A+TP A+ RA+ E+ + Q + P P+ T P P AAP A P
Sbjct: 344 ASTPVAEQIERALDEVTSSQPPPLPPPPPPAQETQEPSPILDSEETRAAAPQAWAGPMEE 403
Query: 58 SPRFIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRA 117
P+ A A P PG P E + F E +AVL P
Sbjct: 404 PPQ-----------------------AQAPPRGPGSPAEDLMFMESAEQAVLAAPVEPAT 440
Query: 118 TKPSALSRAVKVFET 132
+ + A ET
Sbjct: 441 ADATEIHDAADTIET 455
>gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo
sapiens]
Length = 824
Score = 32.7 bits (73), Expect = 0.83
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 2 PTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPS-LTGSPWPGTAAPAASYTPTPRSP 59
P P TTP L + + + G+P P +G+P P + APA S T P+ P
Sbjct: 407 PPPLPTTPTPVPREPGRKPLSSSRLGEVTGSPSPPPRSGAPTPSSRAPALSPTRPPKKP 465
>gi|224586846 sorbin and SH3 domain containing 2 isoform 4 [Homo
sapiens]
Length = 731
Score = 32.7 bits (73), Expect = 0.83
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 2 PTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPS-LTGSPWPGTAAPAASYTPTPRSP 59
P P TTP L + + + G+P P +G+P P + APA S T P+ P
Sbjct: 314 PPPLPTTPTPVPREPGRKPLSSSRLGEVTGSPSPPPRSGAPTPSSRAPALSPTRPPKKP 372
>gi|126722969 centromere protein T [Homo sapiens]
Length = 561
Score = 32.7 bits (73), Expect = 0.83
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 18 VSELDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPRFIGRRQSLIEDARKERE 77
V+E + Q A PG S G AA S + TP S + Q L E
Sbjct: 367 VTEAEGSQGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFL--------E 418
Query: 78 AAVAAAAAAVPSEPGDPL 95
A A AA + SEP +PL
Sbjct: 419 PAPAPGAAVLSSEPAEPL 436
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo
sapiens]
Length = 1747
Score = 32.7 bits (73), Expect = 0.83
Identities = 33/132 (25%), Positives = 48/132 (36%), Gaps = 17/132 (12%)
Query: 31 GAPGPSLTGSPWPGT-----AAPAASYTPTPRSPRFIGRRQSLIEDARKEREAAVAAAAA 85
G P P T P P + P +++P P GR + + K A A A
Sbjct: 828 GIPPPPQTAPPPPPAPYYFDSGPPPAFSPPPPP----GRAYDTVRSSFKPGLEARLGAGA 883
Query: 86 AVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKPSALSRAVKVFETFEAKIHHLETRPA 145
A EPG L + + E++ +A ++ A + R E RP
Sbjct: 884 AGLYEPGAALGPLPYPERQKRARSMIILQDSAPESGDAPRPPPAATPPE--------RPK 935
Query: 146 QRPRAGGPHLEY 157
+RPR GP Y
Sbjct: 936 RRPRPPGPDSPY 947
>gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens]
Length = 566
Score = 32.7 bits (73), Expect = 0.83
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 13/127 (10%)
Query: 2 PTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPRF 61
P+P P RRA E + PG + + + + APAA+ PTP
Sbjct: 108 PSPSPAKPAGAELRRAFLERCLSSPVSAESFPGGAAAVAAFSCSVAPAAA--PTPGEQFL 165
Query: 62 IGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRAT--- 118
+ R E A + A ++AA + L+ A E+ GKA + P A
Sbjct: 166 LPLRAPFPEPALQPDPAPLSAALQS--------LKRAAGGERRGKAPTDCASGPAAAGIK 217
Query: 119 KPSALSR 125
KP A+ +
Sbjct: 218 KPKAMRK 224
>gi|188497618 connector enhancer of kinase suppressor of Ras 1 [Homo
sapiens]
Length = 713
Score = 32.7 bits (73), Expect = 0.83
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 25 QAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPR 60
+A + +P P+ GSP G +PAA TPT RSPR
Sbjct: 523 EAGSHSASPSPAQAGSPLHGDTSPAA--TPTQRSPR 556
>gi|21359951 RNA binding motif protein 42 [Homo sapiens]
Length = 480
Score = 32.3 bits (72), Expect = 1.1
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 1 MPTPDATTPQAKGFRRAVSELDAKQA---EAIMGAPGPSLTGSPWPGTAAPAASYTPTPR 57
+P P A P G R + E++A+ A + ++GAP P G P A P PT
Sbjct: 18 VPGPGAGIPGKSGEER-LKEMEAEMALFEQEVLGAPVP---GIPTAVPAVPTVPTVPTVE 73
Query: 58 SPRFIGR-------RQSLIEDARKEREAAVAAAAAAVPSEPGDP--LEAVAFEEKEGKAV 108
+ + + + ++ EA AAAA VP G P + V F G
Sbjct: 74 AMQVPAAPVIRPIIATNTYQQVQQTLEARAAAAATVVPPMVGGPPFVGPVGF----GPGD 129
Query: 109 LNLLFSPRATKPSALSRA 126
+ L SP A + L RA
Sbjct: 130 RSHLDSPEAREAMFLRRA 147
>gi|115511030 hypothetical protein LOC115004 [Homo sapiens]
Length = 522
Score = 32.3 bits (72), Expect = 1.1
Identities = 74/321 (23%), Positives = 117/321 (36%), Gaps = 57/321 (17%)
Query: 23 AKQAEAIMGAPGPSLT-----GSPWPGTAAPAASYTPTPRSPRF-----IGRRQSLIEDA 72
A Q + GA P + G+P T +PAA P++ +F G RQ
Sbjct: 8 AMQRASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSAPD 67
Query: 73 RKERE--AAVAAAAAAVPSEPGD--PLEAVAFEEKEGKAVLNLLFSPRATKPSALSRAVK 128
+ER A A A P D P +A + EG P A + ALSRA
Sbjct: 68 TQERPPVRATGARAKKAPQRAQDTQPSDATSAPGAEG-------LEPPAAREPALSRA-- 118
Query: 129 VFETFEAKIHHLETRPAQRPRAG-----GPHLEYFVRLEVRR------GDLAALLSGVRQ 177
+ + T+P RP G P L + VRR L A+L ++
Sbjct: 119 --GSCRQRGARCSTKP--RPPPGPWDVPSPGLPVSAPILVRRDAAPGASKLRAVLEKLKL 174
Query: 178 VSEDVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPG-FSDQVYRQRRKLIAEI 236
+D+ + AG + V + HL+ + D G + Y + K+ A
Sbjct: 175 SRDDISTAAG-----MVKGVVD-----HLLLRLKCDSAFRGVGLLNTGSYYEHVKISAPN 224
Query: 237 AFQYRHGDPIPRVEYTAEEIATWKEVY------TTLKGLYATHACGEHLEAFALLERFSG 290
F +PR++ EE + + Y + + GE L A +L +F
Sbjct: 225 EFDVMFKLEVPRIQ--LEEYSNTRAYYFVKFKRNPKENPLSQFLEGEILSASKMLSKFRK 282
Query: 291 YREDNIPQLEDVSRFLKERTG 311
++ I ++D +K + G
Sbjct: 283 IIKEEINDIKDTDVIMKRKRG 303
>gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Homo
sapiens]
Length = 501
Score = 32.0 bits (71), Expect = 1.4
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 23 AKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPT-PRSPRFIGRRQSLIEDARKEREAAVA 81
A Q +GA G S +G P T A AA+ T T R PR +G +R + A++A
Sbjct: 259 AAQPMGPLGAAGRS-SGKPRQPTGAAAAAATSTWSRGPRGLGIPDQACASSRADPGASLA 317
Query: 82 AAAAAV 87
AA+ AV
Sbjct: 318 AASQAV 323
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,571,822
Number of Sequences: 37866
Number of extensions: 1079849
Number of successful extensions: 4567
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 4428
Number of HSP's gapped (non-prelim): 196
length of query: 524
length of database: 18,247,518
effective HSP length: 107
effective length of query: 417
effective length of database: 14,195,856
effective search space: 5919671952
effective search space used: 5919671952
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.