Search of human proteins with 78486578

Search of human proteins with 78486578

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|78486578 bolA-like 3 isoform 2 [Homo sapiens]
         (101 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|78486578 bolA-like 3 isoform 2 [Homo sapiens]                      216   2e-57
gi|78486586 bolA-like 3 isoform 1 [Homo sapiens]                      115   6e-27
gi|4885307 G protein-coupled receptor 21 [Homo sapiens]                27   3.5  
gi|71979663 growth factor receptor-bound protein 14 [Homo sapiens]     27   4.5  
gi|155969714 nuclear protein,  ataxia-telangiectasia locus [Homo...    26   7.7  
gi|7661844 coiled-coil domain containing 22 [Homo sapiens]             26   7.7  
gi|31377468 dedicator of cytokinesis 2 [Homo sapiens]                  26   7.7  

>gi|78486578 bolA-like 3 isoform 2 [Homo sapiens]
          Length = 101

 Score =  216 bits (551), Expect = 2e-57
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 1   MAAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISGTKR 60
           MAAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISGTKR
Sbjct: 1   MAAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISGTKR 60

Query: 61  RNQRDAWIADIYLCPQTLTTPWLHRCCCLRPWMNFTDIILP 101
           RNQRDAWIADIYLCPQTLTTPWLHRCCCLRPWMNFTDIILP
Sbjct: 61  RNQRDAWIADIYLCPQTLTTPWLHRCCCLRPWMNFTDIILP 101


>gi|78486586 bolA-like 3 isoform 1 [Homo sapiens]
          Length = 107

 Score =  115 bits (289), Expect = 6e-27
 Identities = 57/57 (100%), Positives = 57/57 (100%)

Query: 1  MAAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISG 57
          MAAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISG
Sbjct: 1  MAAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISG 57


>gi|4885307 G protein-coupled receptor 21 [Homo sapiens]
          Length = 349

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 77  TLTTPWLHRCCCLRPWMNFTDIILP 101
           TL TPW  R C    W+  T + LP
Sbjct: 139 TLVTPWRLRLCIFLIWLYSTLVFLP 163


>gi|71979663 growth factor receptor-bound protein 14 [Homo sapiens]
          Length = 540

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)

Query: 20  PLHHRMFATQTEGELRVTQILK 41
           P H   FAT+T GE+  TQIL+
Sbjct: 205 PEHMVSFATETNGEISPTQILQ 226


>gi|155969714 nuclear protein,  ataxia-telangiectasia locus [Homo
            sapiens]
          Length = 1427

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 22   HHRMFATQTEGELRVTQILKEKFPRATAIKVTDISGTKRRNQ 63
            H  +  TQ+E ++  T+I+ E F +ATA K  ++     R +
Sbjct: 1138 HTTIRETQSEKKVSPTEIVLESFHKATANKENELCSDVERQK 1179


>gi|7661844 coiled-coil domain containing 22 [Homo sapiens]
          Length = 627

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 45  PRATAIKVTDISGTKRRNQRDAWIA 69
           P+A A +V+D+  T RR ++  W A
Sbjct: 305 PQAQATQVSDVPATSRRPEQVTWAA 329


>gi|31377468 dedicator of cytokinesis 2 [Homo sapiens]
          Length = 1830

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 32 GELRVTQILKEKFPRATAIKVTDISGTKRRNQRDAWIADIYLCPQTLTTPW 82
          G L   ++L+  FP++  I + +++  KRRN  +   A+I L  +  TT W
Sbjct: 47 GYLIKHKMLQGIFPKSF-IHIKEVTVEKRRNTENIIPAEIPLAQEVTTTLW 96


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.138    0.470 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,942,916
Number of Sequences: 37866
Number of extensions: 141368
Number of successful extensions: 416
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 410
Number of HSP's gapped (non-prelim): 7
length of query: 101
length of database: 18,247,518
effective HSP length: 72
effective length of query: 29
effective length of database: 15,521,166
effective search space: 450113814
effective search space used: 450113814
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.