Guide to the Human Genome
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Name: SAR1B Sequence: fasta or formatted (198aa) NCBI GI: 7705827
Description:

SAR1a gene homolog 2

Referenced in:

ADP-Ribosylation Factors
ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt mRNA [198aa] SAR1a gene homolog 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          9           1
 C cysteine            1.0          2           1
 D aspartate           5.6         11           2
 E glutamate           7.1         14           2
 F phenylalanine       5.6         11           1
 G glycine             9.1         18           2
 H histidine           2.5          5           1
 I isoleucine          6.1         12           1
 K lysine              5.6         11           2
 L leucine            13.6         27           2
 M methionine          3.5          7           1
 N asparagine          3.0          6           1
 P proline             3.0          6           1
 Q glutamine           3.0          6           1
 R arginine            5.1         10           2
 S serine              5.6         11           2
 T threonine           6.6         13           2
 V valine              5.1         10           1
 W tryptophan          1.5          3           1
 Y tyrosine            3.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SAR1a gene homolog 2 
SAR1B                 1.000   SAR1a gene homolog 2 
SAR1A                 0.920   SAR1a gene homolog 1 
SAR1A                 0.920   SAR1a gene homolog 1 
ARF6                  0.194   ADP-ribosylation factor 6 
ARL6                  0.194   ADP-ribosylation factor-like 6 
ARL6                  0.194   ADP-ribosylation factor-like 6 
ARL2                  0.191   ADP-ribosylation factor-like 2 
ARL11                 0.186   ADP-ribosylation factor-like 11 
ARF1                  0.186   ADP-ribosylation factor 1 
ARF1                  0.186   ADP-ribosylation factor 1 
ARF1                  0.186   ADP-ribosylation factor 1 
ARF1                  0.186   ADP-ribosylation factor 1 
ARL14                 0.186   ADP-ribosylation factor-like 14 
TRIM23                0.186   ADP-ribosylation factor domain protein 1 isoform alph...
ARF3                  0.183   ADP-ribosylation factor 3 
TRIM23                0.183   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.183   ADP-ribosylation factor domain protein 1 isoform bet...
ARL3                  0.180   ADP-ribosylation factor-like 3 
ARL8B                 0.180   ADP-ribosylation factor-like 10C 
ARF5                  0.178   ADP-ribosylation factor 5 
ARL4D                 0.178   ADP-ribosylation factor-like 4D 
ARL8A                 0.172   ADP-ribosylation factor-like 8A 
ARL1                  0.170   ADP-ribosylation factor-like 1 
ARF4                  0.170   ADP-ribosylation factor 4 
ARL5B                 0.164   ADP-ribosylation factor-like 8 
ARFRP1                0.162   ADP-ribosylation factor related protein 1 isoform a [...
ARL13B                0.162   ADP-ribosylation factor-like 2-like 1 isoform 1 [Hom...
ARL4C                 0.154   ADP-ribosylation factor-like 4C 
ARL5A                 0.154   ADP-ribosylation factor-like 5A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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