Guide to the Human Genome
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Name: GORASP1 Sequence: fasta or formatted (440aa) NCBI GI: 13994253
Description:

Golgi reassembly stacking protein 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         34           2
 C cysteine            0.9          4           1
 D aspartate           5.2         23           1
 E glutamate           8.6         38           3
 F phenylalanine       2.7         12           2
 G glycine             9.3         41           2
 H histidine           2.5         11           1
 I isoleucine          2.3         10           2
 K lysine              2.5         11           2
 L leucine             9.8         43           2
 M methionine          2.0          9           1
 N asparagine          2.3         10           1
 P proline            11.1         49           4
 Q glutamine           4.3         19           2
 R arginine            2.7         12           2
 S serine             11.8         52           5
 T threonine           5.7         25           3
 V valine              5.5         24           2
 W tryptophan          1.1          5           1
 Y tyrosine            1.8          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Golgi reassembly stacking protein 1 
GORASP2               0.338   golgi reassembly stacking protein 2 
WIPF1                 0.037   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.037   WAS/WASL interacting protein family, member 1 
PRR12                 0.033   proline rich 12 
SMARCC2               0.032   SWI/SNF-related matrix-associated actin-dependent re...
MLL2                  0.031   myeloid/lymphoid or mixed-lineage leukemia 2 
EP300                 0.031   E1A binding protein p300 
RGS3                  0.030   regulator of G-protein signalling 3 isoform 6 [Homo...
RGS3                  0.030   regulator of G-protein signalling 3 isoform 2 
RGS3                  0.030   regulator of G-protein signalling 3 isoform 1 
PRB1                  0.029   proline-rich protein BstNI subfamily 1 isoform 1 pre...
FMN2                  0.028   formin 2 
GLTSCR1               0.028   glioma tumor suppressor candidate region gene 1 [Ho...
SMARCC2               0.028   SWI/SNF-related matrix-associated actin-dependent r...
YLPM1                 0.028   YLP motif containing 1 
WBP11                 0.028   WW domain binding protein 11 
FLJ22184              0.028   PREDICTED: hypothetical protein FLJ22184 
MNT                   0.026   MAX binding protein 
EP400                 0.026   E1A binding protein p400 
LMTK3                 0.026   lemur tyrosine kinase 3 
PRB2                  0.026   proline-rich protein BstNI subfamily 2 
SFPQ                  0.026   splicing factor proline/glutamine rich (polypyrimidin...
MUC7                  0.025   mucin 7, secreted precursor 
MUC7                  0.025   mucin 7, secreted precursor 
MUC7                  0.025   mucin 7, secreted precursor 
SF3B4                 0.025   splicing factor 3b, subunit 4 
CASKIN1               0.025   CASK interacting protein 1 
FLJ22184              0.025   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.025   PREDICTED: hypothetical protein LOC80164 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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