Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 76880484
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|76880484 calcitonin isoform CALCA preproprotein [Homo
sapiens]
(141 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|76880484 calcitonin isoform CALCA preproprotein [Homo sapiens] 281 1e-76
gi|4502545 calcitonin isoform CALCA preproprotein [Homo sapiens] 281 1e-76
gi|76880478 calcitonin isoform CGRP preproprotein [Homo sapiens] 147 3e-36
gi|9945304 calcitonin-related polypeptide, beta [Homo sapiens] 129 6e-31
gi|156766050 AHNAK nucleoprotein 2 [Homo sapiens] 31 0.39
gi|82546847 hypothetical protein LOC9907 [Homo sapiens] 28 1.9
gi|239756272 PREDICTED: hypothetical protein XP_002344878 [Homo ... 28 3.3
gi|239750813 PREDICTED: hypothetical protein XP_002347569 [Homo ... 28 3.3
gi|239745173 PREDICTED: hypothetical protein XP_002343380 [Homo ... 28 3.3
gi|13699803 WAS protein family, member 3 [Homo sapiens] 28 3.3
gi|115298645 mitogen-activated protein kinase kinase kinase 14 [... 27 4.3
gi|13376245 zinc finger protein 403 [Homo sapiens] 27 4.3
gi|195927059 axin 2 [Homo sapiens] 27 5.6
gi|62422571 collapsin response mediator protein 1 isoform 1 [Hom... 27 7.3
gi|197313732 pleckstrin homology-like domain, family B, member 2... 27 7.3
gi|197313730 pleckstrin homology-like domain, family B, member 2... 27 7.3
gi|197313728 pleckstrin homology-like domain, family B, member 2... 27 7.3
gi|21955172 pleckstrin homology-like domain, family B, member 2 ... 27 7.3
gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens] 26 9.5
gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo ... 26 9.5
gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo ... 26 9.5
gi|94721239 isoleucine tRNA synthetase [Homo sapiens] 26 9.5
gi|94721241 isoleucine tRNA synthetase [Homo sapiens] 26 9.5
gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Ho... 26 9.5
>gi|76880484 calcitonin isoform CALCA preproprotein [Homo sapiens]
Length = 141
Score = 281 bits (720), Expect = 1e-76
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQ 60
MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQ
Sbjct: 1 MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQ 60
Query: 61 MKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFNKFHTFPQTAIGVGAPGKKR 120
MKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFNKFHTFPQTAIGVGAPGKKR
Sbjct: 61 MKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFNKFHTFPQTAIGVGAPGKKR 120
Query: 121 DMSSDLERDHRPHVSMPQNAN 141
DMSSDLERDHRPHVSMPQNAN
Sbjct: 121 DMSSDLERDHRPHVSMPQNAN 141
>gi|4502545 calcitonin isoform CALCA preproprotein [Homo sapiens]
Length = 141
Score = 281 bits (720), Expect = 1e-76
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQ 60
MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQ
Sbjct: 1 MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQ 60
Query: 61 MKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFNKFHTFPQTAIGVGAPGKKR 120
MKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFNKFHTFPQTAIGVGAPGKKR
Sbjct: 61 MKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFNKFHTFPQTAIGVGAPGKKR 120
Query: 121 DMSSDLERDHRPHVSMPQNAN 141
DMSSDLERDHRPHVSMPQNAN
Sbjct: 121 DMSSDLERDHRPHVSMPQNAN 141
>gi|76880478 calcitonin isoform CGRP preproprotein [Homo sapiens]
Length = 128
Score = 147 bits (371), Expect = 3e-36
Identities = 85/125 (68%), Positives = 96/125 (76%), Gaps = 7/125 (5%)
Query: 1 MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQ 60
MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQ
Sbjct: 1 MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQ 60
Query: 61 MKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFNKF-----HTFPQTAIGVGA 115
MKASELEQEQEREGS + + KR + +TC+ ++ + F T +G A
Sbjct: 61 MKASELEQEQEREGSRIIA--QKRACDTATCVTHRLAGLLSRSGGVVKNNFVPTNVGSKA 118
Query: 116 PGKKR 120
G++R
Sbjct: 119 FGRRR 123
>gi|9945304 calcitonin-related polypeptide, beta [Homo sapiens]
Length = 127
Score = 129 bits (325), Expect = 6e-31
Identities = 72/92 (78%), Positives = 80/92 (86%), Gaps = 3/92 (3%)
Query: 1 MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQ 60
MGF+KFSPFLALSILVL QAGSL AAPFRSALESSP DPATLS+++ARLLLAALVQDYVQ
Sbjct: 1 MGFRKFSPFLALSILVLYQAGSLQAAPFRSALESSP-DPATLSKEDARLLLAALVQDYVQ 59
Query: 61 MKASELEQEQEREGSSLDSPRSKRCGNLSTCM 92
MKASEL+QEQE +GSS S KR N +TC+
Sbjct: 60 MKASELKQEQETQGSS--SAAQKRACNTATCV 89
>gi|156766050 AHNAK nucleoprotein 2 [Homo sapiens]
Length = 5795
Score = 30.8 bits (68), Expect = 0.39
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 59 VQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFN-KFHTFPQTAIGVGAPG 117
V++ +E + E G+ LDS R + G+LS +D K F + GV APG
Sbjct: 1782 VEVSLPSVEVDVEAPGAKLDSVRLE--GDLSLADKDVTAKDSKFKMPKFKMPSFGVSAPG 1839
Query: 118 KKRDMSSDLERDH-RPHVSMP 137
K + S D+ VS+P
Sbjct: 1840 KSIEASVDVSAPKVEAEVSLP 1860
Score = 30.8 bits (68), Expect = 0.39
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 59 VQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFN-KFHTFPQTAIGVGAPG 117
V+M S +E + + + LD R + G+LS G +D K F + GV APG
Sbjct: 2772 VKMSLSSMEVDVQAPRAKLDGARLE--GDLSLADKGMTAKDSKFKMPKFKMPSFGVSAPG 2829
Query: 118 KKRDMSSDL 126
K + S D+
Sbjct: 2830 KSIEASVDV 2838
Score = 30.8 bits (68), Expect = 0.39
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 52 AALVQDYVQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFN-KFHTFPQTA 110
A ++ V++ +E + E G+ LDS R + G+LS +D K F +
Sbjct: 4250 ADVMTPVVEVSLPSMEVDVEAPGAKLDSVRLE--GDLSLADKDMTAKDSKFKMPKFKMPS 4307
Query: 111 IGVGAPGKKRDMSSDL 126
GV APGK + S D+
Sbjct: 4308 FGVSAPGKSIEASLDV 4323
Score = 30.4 bits (67), Expect = 0.50
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 59 VQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFNKFHTFPQTAIGVGAPGK 118
V++ +E + E G+ LD R + +L+ L T F K F + GV APGK
Sbjct: 1452 VEVSLPSVEVDVEAPGAKLDGGRLEEDMSLADKDLTTKDSKF-KMPKFKMPSFGVSAPGK 1510
Query: 119 KRDMSSDL 126
+ S D+
Sbjct: 1511 SIEASVDV 1518
Score = 29.6 bits (65), Expect = 0.86
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 59 VQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFN-KFHTFPQTAIGVGAPG 117
V++ +E + E G+ LD R + G+LS +D K F + GV APG
Sbjct: 3927 VEVSLPSVEVDVEAPGAKLDGARLE--GDLSLADKDMTAKDSKFKMPKFKMPSFGVSAPG 3984
Query: 118 KKRDMSSDL 126
K + S D+
Sbjct: 3985 KSMEASVDV 3993
Score = 29.3 bits (64), Expect = 1.1
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 59 VQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFN-KFHTFPQTAIGVGAPG 117
V+M S +E + + + LD + + G+LS +D K F + GV APG
Sbjct: 4092 VKMSLSSMEVDVQAPRAKLDGVQLE--GDLSLADKDVTAKDSKFKMPKFKMPSFGVSAPG 4149
Query: 118 KKRDMSSDL-ERDHRPHVSMP 137
K + S D+ E + VS+P
Sbjct: 4150 KSMEASVDVSELKAKADVSLP 4170
Score = 28.9 bits (63), Expect = 1.5
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 59 VQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFN-KFHTFPQTAIGVGAPG 117
V++ +E + E G+ LDS R + G LS +D K F + G APG
Sbjct: 1122 VEVSLPSVEVDVEAPGAKLDSARLE--GELSLADKDVTAKDSRFKMPKFKMPSFGASAPG 1179
Query: 118 KKRDMSSDL 126
K + S D+
Sbjct: 1180 KSIEASVDV 1188
Score = 28.5 bits (62), Expect = 1.9
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 59 VQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFN-KFHTFPQTAIGVGAPG 117
V++ +E + E G+ LD + G+LS T+D K F + GV APG
Sbjct: 2442 VEVSQPSVEVDVEAPGAKLDGAWLE--GDLSVADKDVTTKDSRFKIPKFKMPSFGVSAPG 2499
Query: 118 KKRDMSSDL 126
K + S D+
Sbjct: 2500 KSIEASVDV 2508
Score = 28.1 bits (61), Expect = 2.5
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 59 VQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFN-KFHTFPQTAIGVGAPG 117
V+M S +E + + + LD R + G+LS +D K F + GV APG
Sbjct: 792 VKMSLSSMEVDVQAPRAKLDGARLE--GDLSLADKEVTAKDSKFKMPKFKMPSFGVSAPG 849
Query: 118 KKRDMSSDL 126
K + S D+
Sbjct: 850 KSMEDSVDV 858
Score = 28.1 bits (61), Expect = 2.5
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 59 VQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFN-KFHTFPQTAIGVGAPG 117
V+M S +E + + + LD + + G+LS +D K F + GV APG
Sbjct: 1617 VKMSLSSMEVDVQAPRAKLDGAQLE--GDLSLADKAVTAKDSKFKMPKFKMPSFGVSAPG 1674
Query: 118 KKRDMSSDL-ERDHRPHVSMP 137
K + S D+ E VS+P
Sbjct: 1675 KSIEASVDVSEPKVEADVSLP 1695
Score = 27.3 bits (59), Expect = 4.3
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 59 VQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFN-KFHTFPQTAIGVGAPG 117
V++ +E + E + LD R + G+LS +D K F + GV APG
Sbjct: 2937 VEVSLPSVEVDVEAPRAKLDGARLE--GDLSLADKDVTAKDSKFKMPKFKMPSFGVSAPG 2994
Query: 118 KKRDMSSDLERDH-RPHVSMP 137
K ++S D+ VS+P
Sbjct: 2995 KSIEVSVDVSAPKVEAEVSLP 3015
Score = 27.3 bits (59), Expect = 4.3
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 59 VQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFN-KFHTFPQTAIGVGAPG 117
V++ +E + E G+ LD R + G+LS +D K F + GV APG
Sbjct: 3102 VEVSQPGMEVDVEAPGAKLDGARLE--GDLSLADKDVTAKDSKFKMPKFKMPSFGVSAPG 3159
Query: 118 KKRDMSSDL 126
K ++ D+
Sbjct: 3160 KSIEVLVDV 3168
Score = 26.6 bits (57), Expect = 7.3
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 59 VQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFN-KFHTFPQTAIGVGAPG 117
V + +E + + G+ LD + G+LS +D K F + GV APG
Sbjct: 1287 VAVSLPSVEVDMQAPGAKLDGAQLD--GDLSLADKDVTAKDSKFKMPKFKMPSFGVSAPG 1344
Query: 118 KKRDMSSDL 126
K + S DL
Sbjct: 1345 KSIEASVDL 1353
>gi|82546847 hypothetical protein LOC9907 [Homo sapiens]
Length = 807
Score = 28.5 bits (62), Expect = 1.9
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 39 PATLSEDEARLLLAALVQDYVQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQ 98
P TL ED+A LL LV ++ + L+Q G +PR+++ G + T + G
Sbjct: 165 PGTLQEDQATLLSKRLVD---WLRYASLQQGLPHSGGFFSTPRARQPGPV-TEVDGAVAT 220
Query: 99 DF 100
DF
Sbjct: 221 DF 222
>gi|239756272 PREDICTED: hypothetical protein XP_002344878 [Homo
sapiens]
Length = 141
Score = 27.7 bits (60), Expect = 3.3
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 8 PFLALSILVL----LQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQ 56
P L L +L+ G H APF SA P P T E ++RL L Q
Sbjct: 81 PSLPLGVLITDPLTRHPGHHHPAPFHSAALLVPVKPPTAWEGKSRLARPCLSQ 133
>gi|239750813 PREDICTED: hypothetical protein XP_002347569 [Homo
sapiens]
Length = 141
Score = 27.7 bits (60), Expect = 3.3
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 8 PFLALSILVL----LQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQ 56
P L L +L+ G H APF SA P P T E ++RL L Q
Sbjct: 81 PSLPLGVLITDPLTRHPGHHHPAPFHSAALLVPVKPPTAWEGKSRLARPCLSQ 133
>gi|239745173 PREDICTED: hypothetical protein XP_002343380 [Homo
sapiens]
Length = 141
Score = 27.7 bits (60), Expect = 3.3
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 8 PFLALSILVL----LQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQ 56
P L L +L+ G H APF SA P P T E ++RL L Q
Sbjct: 81 PSLPLGVLITDPLTRHPGHHHPAPFHSAALLVPVKPPTAWEGKSRLARPCLSQ 133
>gi|13699803 WAS protein family, member 3 [Homo sapiens]
Length = 502
Score = 27.7 bits (60), Expect = 3.3
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 18 LQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQMKASELEQEQE 71
L + +H P A PA P +AR L A ++ +Q+K + ++EQE
Sbjct: 414 LSSSPMHGPPVAEAKRQEPAQPPI---SDARSDLLAAIRMGIQLKKVQEQREQE 464
>gi|115298645 mitogen-activated protein kinase kinase kinase 14
[Homo sapiens]
Length = 947
Score = 27.3 bits (59), Expect = 4.3
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 18 LQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQMKASELEQEQEREGSSL 77
L SL AP R+ SSP AT+ E E + L L + + S EQEQ S+
Sbjct: 743 LPLSSLEPAPARNP--SSPERKATVPEQELQQLEIELFLNSLSQPFSLEEQEQILSCLSI 800
Query: 78 DS 79
DS
Sbjct: 801 DS 802
>gi|13376245 zinc finger protein 403 [Homo sapiens]
Length = 697
Score = 27.3 bits (59), Expect = 4.3
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 63 ASELEQEQEREGSSLDSPRSKRCGNL---STCMLGTYTQDFNKFHTFPQTAIGVGAPGKK 119
A E E QE+E +++ K CG+ +TC+ T + N T P + +G+P K
Sbjct: 396 ADEKEVSQEKETDFIENSSCKACGSTEDGNTCVEVIVTNE-NTSCTCPSSGNLLGSPKIK 454
Query: 120 RDMS 123
+ +S
Sbjct: 455 KGLS 458
>gi|195927059 axin 2 [Homo sapiens]
Length = 843
Score = 26.9 bits (58), Expect = 5.6
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 25/119 (21%)
Query: 33 ESSPADPATLSEDEA----RLLLAALVQDYVQMKASELEQEQEREGSSLDSPRSKRCGN- 87
E +P +PAT + + +L L + ++ + ++ +++EREGS L +
Sbjct: 361 EMTPVEPATFAAELISRLEKLKLELESRHSLEERLQQIREDEEREGSELTLNSREGAPTQ 420
Query: 88 --LSTCMLGTYTQDFNKFHTFPQTAI-----------GVGAPGKKRDMSSDLERDHRPH 133
LS G+Y +D PQT + G +PG R DH H
Sbjct: 421 HPLSLLPSGSYEED-------PQTILDDHLSRVLKTPGCQSPGVGRYSPRSRSPDHHHH 472
>gi|62422571 collapsin response mediator protein 1 isoform 1 [Homo
sapiens]
Length = 686
Score = 26.6 bits (57), Expect = 7.3
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 72 REGSSLDSPRSKRCGNLSTCMLGTY---TQDFNKFHT-------FPQTA-----IGVGAP 116
R GS+ +PR K G + + G Y T DF+ + P++A +G+ P
Sbjct: 20 RPGSAAQTPRQKY-GGMFAAVEGAYENKTIDFDAYSVGRRGSARTPRSAGRPDAVGLPGP 78
Query: 117 GKKRDMSSDLERDHRPHVSMP 137
G D +SD+ VS P
Sbjct: 79 GGSEDTASDVSEPSGSAVSSP 99
>gi|197313732 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 26.6 bits (57), Expect = 7.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 36 PADPATLSEDEARLLLAALVQDYVQMKASELEQEQEREGSSLDS--PRSKRCGNLS 89
PAD ++ + A +LA+ Q ++ E ++Q +EG L PR K ++S
Sbjct: 854 PADADAVATEPATAVLASQPQSKEHFRSLEERKKQHKEGLYLSDTLPRKKTTSSIS 909
>gi|197313730 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 26.6 bits (57), Expect = 7.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 36 PADPATLSEDEARLLLAALVQDYVQMKASELEQEQEREGSSLDS--PRSKRCGNLS 89
PAD ++ + A +LA+ Q ++ E ++Q +EG L PR K ++S
Sbjct: 854 PADADAVATEPATAVLASQPQSKEHFRSLEERKKQHKEGLYLSDTLPRKKTTSSIS 909
>gi|197313728 pleckstrin homology-like domain, family B, member 2
isoform b [Homo sapiens]
Length = 1237
Score = 26.6 bits (57), Expect = 7.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 36 PADPATLSEDEARLLLAALVQDYVQMKASELEQEQEREGSSLDS--PRSKRCGNLS 89
PAD ++ + A +LA+ Q ++ E ++Q +EG L PR K ++S
Sbjct: 838 PADADAVATEPATAVLASQPQSKEHFRSLEERKKQHKEGLYLSDTLPRKKTTSSIS 893
>gi|21955172 pleckstrin homology-like domain, family B, member 2
isoform c [Homo sapiens]
Length = 1210
Score = 26.6 bits (57), Expect = 7.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 36 PADPATLSEDEARLLLAALVQDYVQMKASELEQEQEREGSSLDS--PRSKRCGNLS 89
PAD ++ + A +LA+ Q ++ E ++Q +EG L PR K ++S
Sbjct: 811 PADADAVATEPATAVLASQPQSKEHFRSLEERKKQHKEGLYLSDTLPRKKTTSSIS 866
>gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens]
Length = 1950
Score = 26.2 bits (56), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 105 TFPQTAIGVGAPGKKRDMSSD 125
T P ++G+GAPGK D S D
Sbjct: 83 TKPFFSLGLGAPGKAEDKSGD 103
>gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo
sapiens]
Length = 2134
Score = 26.2 bits (56), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 105 TFPQTAIGVGAPGKKRDMSSD 125
T P ++G+GAPGK D S D
Sbjct: 94 TKPFFSLGLGAPGKAEDKSGD 114
>gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo
sapiens]
Length = 2134
Score = 26.2 bits (56), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 105 TFPQTAIGVGAPGKKRDMSSD 125
T P ++G+GAPGK D S D
Sbjct: 94 TKPFFSLGLGAPGKAEDKSGD 114
>gi|94721239 isoleucine tRNA synthetase [Homo sapiens]
Length = 1262
Score = 26.2 bits (56), Expect = 9.5
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 54 LVQDYVQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGT 95
L+Q+ Q+K SELE R GSSL P NL+ C G+
Sbjct: 1053 LIQEKTQLKGSELEITLTR-GSSLPGPACAYV-NLNICANGS 1092
>gi|94721241 isoleucine tRNA synthetase [Homo sapiens]
Length = 1262
Score = 26.2 bits (56), Expect = 9.5
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 54 LVQDYVQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGT 95
L+Q+ Q+K SELE R GSSL P NL+ C G+
Sbjct: 1053 LIQEKTQLKGSELEITLTR-GSSLPGPACAYV-NLNICANGS 1092
>gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Homo
sapiens]
Length = 1288
Score = 26.2 bits (56), Expect = 9.5
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 34 SSPADPATLS----EDEARLLLAALVQDYVQMKASELEQEQERE 73
+SP + + LS E + R +LAA+++ + A L QEQ++E
Sbjct: 983 ASPEESSGLSLLHQESKRRAMLAAVLEQELPALAENLHQEQKQE 1026
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,501,229
Number of Sequences: 37866
Number of extensions: 220626
Number of successful extensions: 830
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 802
Number of HSP's gapped (non-prelim): 40
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.