LAMP2 35974

Name: LAMP2	Sequence: fasta or formatted (410aa)		NCBI GI: 7669503
Description: lysosomal-associated membrane protein 2 isoform B precursor		Referenced in: Glycogen Lysosomes and Related Organelles
Other entries for this name: alt prot [411aa] lysosomal-associated membrane protein 2 isoform C precursor alt prot [410aa] lysosomal-associated membrane protein 2 isoform A precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 24 2 C cysteine 2.4 10 1 D aspartate 5.4 22 3 E glutamate 3.2 13 1 F phenylalanine 4.4 18 1 G glycine 6.1 25 1 H histidine 1.2 5 1 I isoleucine 6.1 25 2 K lysine 4.4 18 1 L leucine 8.8 36 2 M methionine 1.2 5 1 N asparagine 7.8 32 3 P proline 3.9 16 1 Q glutamine 3.4 14 1 R arginine 2.7 11 2 S serine 8.5 35 2 T threonine 10.5 43 3 V valine 8.8 36 2 W tryptophan 1.0 4 1 Y tyrosine 4.4 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lysosomal-associated membrane protein 2 isoform B pre... LAMP2 0.956 lysosomal-associated membrane protein 2 isoform A pre... LAMP2 0.954 lysosomal-associated membrane protein 2 isoform C p... LAMP1 0.301 lysosomal-associated membrane protein 1 LAMP3 0.095 lysosomal-associated membrane protein 3 CD68 0.068 CD68 antigen isoform B CD68 0.068 CD68 antigen isoform A ATP6AP1L 0.017 ATPase, H+ transporting, lysosomal accessory protein... C20orf103 0.017 chromosome 20 open reading frame 103 precursor FRYL 0.011 furry-like GPR112 0.011 G-protein coupled receptor 112 LOC100131514 0.010 PREDICTED: similar to hCG1747327, partial MUC2 0.007 mucin 2 precursor PRG4 0.006 proteoglycan 4 isoform D PRG4 0.006 proteoglycan 4 isoform C PRG4 0.006 proteoglycan 4 isoform B PRG4 0.006 proteoglycan 4 isoform A CA12 0.006 carbonic anhydrase XII isoform 1 precursor EPHB2 0.005 ephrin receptor EphB2 isoform 2 precursor LOC728804 0.005 PREDICTED: hypothetical protein LOC728804 0.005 PREDICTED: hypothetical protein MUC5AC 0.005 mucin 5AC PTPRC 0.005 protein tyrosine phosphatase, receptor type, C isofo... MUC7 0.005 mucin 7, secreted precursor MUC7 0.005 mucin 7, secreted precursor MUC7 0.005 mucin 7, secreted precursor MUC5B 0.005 mucin 5, subtype B, tracheobronchial RFX7 0.005 regulatory factor X domain containing 2 MAP3K10 0.005 mitogen-activated protein kinase kinase kinase 10 [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.