WDR43 6381

Name: WDR43	Sequence: fasta or formatted (677aa)		NCBI GI: 157743245
Description: WD repeat domain 43		Referenced in: Nucleus and Nucleolus Small RNAs in RNA Processing WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 41 2 C cysteine 2.5 17 1 D aspartate 5.6 38 2 E glutamate 9.0 61 3 F phenylalanine 1.9 13 1 G glycine 6.2 42 4 H histidine 3.2 22 2 I isoleucine 4.0 27 2 K lysine 7.4 50 2 L leucine 10.2 69 3 M methionine 1.9 13 1 N asparagine 4.0 27 2 P proline 5.3 36 2 Q glutamine 3.8 26 1 R arginine 3.4 23 1 S serine 8.7 59 2 T threonine 6.4 43 2 V valine 6.9 47 2 W tryptophan 1.6 11 1 Y tyrosine 1.8 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 WD repeat domain 43 KATNB1 0.030 katanin p80 subunit B 1 TAF5L 0.030 PCAF associated factor 65 beta isoform a WDR5B 0.028 WD repeat domain 5B TRIM44 0.027 DIPB protein PELP1 0.025 proline, glutamic acid and leucine rich protein 1 [... MYT1 0.024 myelin transcription factor 1 SMU1 0.024 smu-1 suppressor of mec-8 and unc-52 homolog LOC647020 0.024 PREDICTED: similar to acidic (leucine-rich) nuclear... LOC647020 0.024 PREDICTED: similar to acidic (leucine-rich) nuclear... PAFAH1B1 0.024 platelet-activating factor acetylhydrolase, isoform I... RPGR 0.024 retinitis pigmentosa GTPase regulator isoform C [Hom... MYT1L 0.024 myelin transcription factor 1-like ANP32B 0.024 acidic (leucine-rich) nuclear phosphoprotein 32 famil... WDR5 0.023 WD repeat domain 5 WDR5 0.023 WD repeat domain 5 CENPB 0.023 centromere protein B UBTF 0.023 upstream binding transcription factor, RNA polymera... UBTF 0.023 upstream binding transcription factor, RNA polymera... UBTF 0.023 upstream binding transcription factor, RNA polymerase... SNRNP40 0.022 WD repeat domain 57 (U5 snRNP specific) EIF5B 0.022 eukaryotic translation initiation factor 5B YTHDC1 0.022 splicing factor YT521-B isoform 2 YTHDC1 0.022 splicing factor YT521-B isoform 1 LOC728792 0.021 PREDICTED: hypothetical protein RRP9 0.021 RNA, U3 small nucleolar interacting protein 2 TAF5 0.021 TBP-associated factor 5 WDR3 0.021 WD repeat-containing protein 3 NCL 0.021 nucleolin NRD1 0.020 nardilysin isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.