Search of human proteins with 73808271

Search of human proteins with 73808271

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|73808271 matrix metalloproteinase 28 isoform 3 [Homo
sapiens]
         (130 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|73808271 matrix metalloproteinase 28 isoform 3 [Homo sapiens]      265   1e-71
gi|13236530 matrix metalloproteinase 28 isoform 1 preproprotein ...   256   4e-69
gi|22218341 matrix metalloproteinase 21 preproprotein [Homo sapi...    55   2e-08
gi|239750339 PREDICTED: hypothetical protein XP_002347374 [Homo ...    51   3e-07
gi|4505213 matrix metalloproteinase 19 isoform rasi-1 preproprot...    51   3e-07
gi|4505209 matrix metalloproteinase 13 preproprotein [Homo sapiens]    47   3e-06
gi|5729929 matrix metalloproteinase 24 preproprotein [Homo sapiens]    47   4e-06
gi|4826834 matrix metalloproteinase 14 preproprotein [Homo sapiens]    44   4e-05
gi|149999365 matrix metalloproteinase 16 isoform 2 preproprotein...    44   5e-05
gi|13027802 matrix metalloproteinase 16 isoform 1 preproprotein ...    44   5e-05
gi|4505211 matrix metalloproteinase 15 preproprotein [Homo sapiens]    44   5e-05
gi|74272287 matrix metalloproteinase 9 preproprotein [Homo sapiens]    42   1e-04
gi|11968059 matrix metalloproteinase 25 preproprotein [Homo sapi...    41   2e-04
gi|112382270 matrix metalloproteinase 17 preproprotein [Homo sap...    40   4e-04
gi|4505215 matrix metalloproteinase 1 isoform 1 preproprotein [H...    40   7e-04
gi|4505205 matrix metalloproteinase 10 preproprotein [Homo sapiens]    40   7e-04
gi|4505219 matrix metalloproteinase 7 preproprotein [Homo sapiens]     38   0.003
gi|45359865 matrix metalloproteinase 20 preproprotein [Homo sapi...    38   0.003
gi|73808268 matrix metalloproteinase 27 [Homo sapiens]                 38   0.003
gi|73858572 matrix metalloproteinase 12 preproprotein [Homo sapi...    37   0.006
gi|4505217 matrix metalloproteinase 3 preproprotein [Homo sapiens]     36   0.008
gi|189217853 matrix metalloproteinase 2 isoform b [Homo sapiens]       33   0.049
gi|11342666 matrix metalloproteinase 2 isoform a preproprotein [...    33   0.049
gi|4505221 matrix metalloproteinase 8 preproprotein [Homo sapiens]     31   0.32 
gi|225543094 matrix metalloproteinase 1 isoform 2 [Homo sapiens]       29   0.92 
gi|45594240 limbic system-associated membrane protein [Homo sapi...    28   1.6  
gi|162951877 scinderin isoform 1 [Homo sapiens]                        27   3.5  
gi|14916473 scinderin isoform 2 [Homo sapiens]                         27   3.5  
gi|71772838 sorting nexin 22 [Homo sapiens]                            27   4.6  
gi|221139926 NHS-like 1 [Homo sapiens]                                 26   7.8  

>gi|73808271 matrix metalloproteinase 28 isoform 3 [Homo sapiens]
          Length = 130

 Score =  265 bits (676), Expect = 1e-71
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MVARVGLLLRALQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAPTSTRFS 60
           MVARVGLLLRALQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAPTSTRFS
Sbjct: 1   MVARVGLLLRALQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAPTSTRFS 60

Query: 61  DAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMRRK 120
           DAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMRRK
Sbjct: 61  DAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMRRK 120

Query: 121 KRFAKQGEHC 130
           KRFAKQGEHC
Sbjct: 121 KRFAKQGEHC 130


>gi|13236530 matrix metalloproteinase 28 isoform 1 preproprotein
           [Homo sapiens]
          Length = 520

 Score =  256 bits (654), Expect = 4e-69
 Identities = 127/127 (100%), Positives = 127/127 (100%)

Query: 1   MVARVGLLLRALQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAPTSTRFS 60
           MVARVGLLLRALQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAPTSTRFS
Sbjct: 1   MVARVGLLLRALQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAPTSTRFS 60

Query: 61  DAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMRRK 120
           DAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMRRK
Sbjct: 61  DAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMRRK 120

Query: 121 KRFAKQG 127
           KRFAKQG
Sbjct: 121 KRFAKQG 127


>gi|22218341 matrix metalloproteinase 21 preproprotein [Homo
           sapiens]
          Length = 569

 Score = 55.1 bits (131), Expect = 2e-08
 Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 9/69 (13%)

Query: 36  AEAFLEKYGYLN---------EQVPKAPTSTRFSDAIRAFQWVSQLPVSGVLDRATLRQM 86
           A+ FL +YG+           E  P+ P     ++A+R FQ  + LP SG LD ATL  M
Sbjct: 53  AQRFLSRYGWSGVWAAWGPSPEGPPETPKGAALAEAVRRFQRANALPASGELDAATLAAM 112

Query: 87  TRPRCGVTD 95
            RPRCGV D
Sbjct: 113 NRPRCGVPD 121


>gi|239750339 PREDICTED: hypothetical protein XP_002347374 [Homo
          sapiens]
          Length = 183

 Score = 50.8 bits (120), Expect = 3e-07
 Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%)

Query: 39 FLEKYGYLNEQVPKAPT--STRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTD 95
          +L +YGYL + +  +        ++A+RAFQ  S+LPVSG LD AT  +M +PRCG+ D
Sbjct: 31 YLSQYGYLQKPLEGSNNFKPEDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLED 89


>gi|4505213 matrix metalloproteinase 19 isoform rasi-1
          preproprotein [Homo sapiens]
          Length = 508

 Score = 50.8 bits (120), Expect = 3e-07
 Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%)

Query: 39 FLEKYGYLNEQVPKAPT--STRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTD 95
          +L +YGYL + +  +        ++A+RAFQ  S+LPVSG LD AT  +M +PRCG+ D
Sbjct: 31 YLSQYGYLQKPLEGSNNFKPEDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLED 89


>gi|4505209 matrix metalloproteinase 13 preproprotein [Homo sapiens]
          Length = 471

 Score = 47.4 bits (111), Expect = 3e-06
 Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 8/100 (8%)

Query: 8   LLRALQLLLWGHLDAQPAERGGQE--LRKEAEAFLEKY--GYLNEQ----VPKAPTSTRF 59
           +L A   L W H  A P   GG E  L +E   F E+Y   Y +      + K   ++  
Sbjct: 5   VLAAFLFLSWTHCRALPLPSGGDEDDLSEEDLQFAERYLRSYYHPTNLAGILKENAASSM 64

Query: 60  SDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSY 99
           ++ +R  Q    L V+G LD  TL  M +PRCGV D   Y
Sbjct: 65  TERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGVPDVGEY 104


>gi|5729929 matrix metalloproteinase 24 preproprotein [Homo sapiens]
          Length = 645

 Score = 47.0 bits (110), Expect = 4e-06
 Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 24/103 (23%)

Query: 35  EAEA------FLEKYGYL---NEQVPKAPTSTRFSDAIRAFQWVSQLPVSGVLDRATLRQ 85
           EAEA      +L+ YGYL   + +     ++     A+   Q    +PV+GVLD+ T+  
Sbjct: 74  EAEAPFAGQNWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEW 133

Query: 86  MTRPRCGVTDTNSYAAWAERISDLFARHRTKMRRKKRFAKQGE 128
           M +PRCGV D                 H ++ RR KR+A  G+
Sbjct: 134 MKKPRCGVPD---------------HPHLSRRRRNKRYALTGQ 161


>gi|4826834 matrix metalloproteinase 14 preproprotein [Homo sapiens]
          Length = 582

 Score = 43.9 bits (102), Expect = 4e-05
 Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 20/96 (20%)

Query: 37  EAFLEKYGYL-----NEQVPKAPTSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRC 91
           EA+L++YGYL          ++P S   S AI A Q    L V+G  D  T++ M RPRC
Sbjct: 36  EAWLQQYGYLPPGDLRTHTQRSPQS--LSAAIAAMQKFYGLQVTGKADADTMKAMRRPRC 93

Query: 92  GVTDTNSYAAWAERISDLFARHRTKMRRKKRFAKQG 127
           GV D              F        R+KR+A QG
Sbjct: 94  GVPDK-------------FGAEIKANVRRKRYAIQG 116


>gi|149999365 matrix metalloproteinase 16 isoform 2 preproprotein
           [Homo sapiens]
          Length = 457

 Score = 43.5 bits (101), Expect = 5e-05
 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 12  LQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQW 68
           LQ LLW       A   G E     E +L+KYGYL    P+     ++     A+ A Q 
Sbjct: 23  LQTLLW----ILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQ 78

Query: 69  VSQLPVSGVLDRATLRQMTRPRCGVTD 95
              + ++G +DR T+  M +PRCGV D
Sbjct: 79  FYGINMTGKVDRNTIDWMKKPRCGVPD 105


>gi|13027802 matrix metalloproteinase 16 isoform 1 preproprotein
           [Homo sapiens]
          Length = 607

 Score = 43.5 bits (101), Expect = 5e-05
 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 12  LQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQW 68
           LQ LLW       A   G E     E +L+KYGYL    P+     ++     A+ A Q 
Sbjct: 23  LQTLLW----ILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQ 78

Query: 69  VSQLPVSGVLDRATLRQMTRPRCGVTD 95
              + ++G +DR T+  M +PRCGV D
Sbjct: 79  FYGINMTGKVDRNTIDWMKKPRCGVPD 105


>gi|4505211 matrix metalloproteinase 15 preproprotein [Homo sapiens]
          Length = 669

 Score = 43.5 bits (101), Expect = 5e-05
 Identities = 42/124 (33%), Positives = 52/124 (41%), Gaps = 21/124 (16%)

Query: 9   LRALQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAPTSTRFS-----DAI 63
           L  L L+L G L    A    ++    AE +L  YGYL +  P    ST  S      A+
Sbjct: 29  LLPLLLVLLGCLGLGVA---AEDAEVHAENWLRLYGYLPQ--PSRHMSTMRSAQILASAL 83

Query: 64  RAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMRRKKRF 123
              Q    +PV+GVLD  T   M RPRCGV D       A              RR+KR+
Sbjct: 84  AEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQFGVRVKA-----------NLRRRRKRY 132

Query: 124 AKQG 127
           A  G
Sbjct: 133 ALTG 136


>gi|74272287 matrix metalloproteinase 9 preproprotein [Homo sapiens]
          Length = 707

 Score = 42.4 bits (98), Expect = 1e-04
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 33  RKEAEAFLEKYGYLNEQVPKAPTSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCG 92
           R+ AE +L +YGY      +  + +    A+   Q    LP +G LD ATL+ M  PRCG
Sbjct: 42  RQLAEEYLYRYGYTRVAEMRGESKS-LGPALLLLQKQLSLPETGELDSATLKAMRTPRCG 100

Query: 93  VTDTNSY 99
           V D   +
Sbjct: 101 VPDLGRF 107


>gi|11968059 matrix metalloproteinase 25 preproprotein [Homo
           sapiens]
          Length = 562

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 19/127 (14%)

Query: 4   RVGLLLRALQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVP---KAPTSTRFS 60
           R+ L L AL LLL     A+  +   Q++    + +L +YGYL    P   +  +  +  
Sbjct: 2   RLRLRLLALLLLLLAP-PARAPKPSAQDVSLGVD-WLTRYGYLPPPHPAQAQLQSPEKLR 59

Query: 61  DAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMRRK 120
           DAI+  Q  + LP +G +D  T+  M +PRC + D    A                +RR+
Sbjct: 60  DAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPDVLGVAG--------------LVRRR 105

Query: 121 KRFAKQG 127
           +R+A  G
Sbjct: 106 RRYALSG 112


>gi|112382270 matrix metalloproteinase 17 preproprotein [Homo
           sapiens]
          Length = 603

 Score = 40.4 bits (93), Expect = 4e-04
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 39  FLEKYGYLNEQVP---KAPTSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTD 95
           +L ++GYL    P   +  T    S AI A Q    L  +G+LD ATL  M  PRC + D
Sbjct: 55  WLSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPD 114


>gi|4505215 matrix metalloproteinase 1 isoform 1 preproprotein [Homo
           sapiens]
          Length = 469

 Score = 39.7 bits (91), Expect = 7e-04
 Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 5/93 (5%)

Query: 12  LQLLLWGHLDAQ-PAERGGQELRKE-AEAFLEKYGYLNE---QVPKAPTSTRFSDAIRAF 66
           L LL WG +    PA    QE   +  + +LEKY  L     QV K   S    + ++  
Sbjct: 8   LLLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQM 67

Query: 67  QWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSY 99
           Q    L V+G  D  TL+ M +PRCGV D   +
Sbjct: 68  QEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQF 100


>gi|4505205 matrix metalloproteinase 10 preproprotein [Homo sapiens]
          Length = 476

 Score = 39.7 bits (91), Expect = 7e-04
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 36  AEAFLEKYGYLNEQVP--KAPTSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGV 93
           A+ +LEKY  L + V   +   S      I+  Q    L V+G LD  TL  M +PRCGV
Sbjct: 34  AQQYLEKYYNLEKDVKQFRRKDSNLIVKKIQGMQKFLGLEVTGKLDTDTLEVMRKPRCGV 93

Query: 94  TDTNSYAAW 102
            D   ++++
Sbjct: 94  PDVGHFSSF 102


>gi|4505219 matrix metalloproteinase 7 preproprotein [Homo sapiens]
          Length = 267

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 24  PAERGGQ-ELR-KEAEAFLEKYGYLNEQVPKAPTSTRFSDAIRAFQWVSQLPVSGVLDRA 81
           P E GG  EL+ ++A+ +L+++ YL +   K   S      ++  Q    LP++G+L+  
Sbjct: 21  PQEAGGMSELQWEQAQDYLKRF-YLYDSETKNANSLEAK--LKEMQKFFGLPITGMLNSR 77

Query: 82  TLRQMTRPRCGVTDTNSYA 100
            +  M +PRCGV D   Y+
Sbjct: 78  VIEIMQKPRCGVPDVAEYS 96


>gi|45359865 matrix metalloproteinase 20 preproprotein [Homo
           sapiens]
          Length = 483

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 36  AEAFLEKYGYLNEQVPK-----APTSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPR 90
           A+A+L+KY Y N++  +     A  S      I+  Q    L V+G LD+ T+  + +PR
Sbjct: 41  AQAYLDKY-YTNKEGHQIGEMVARGSNSMIRKIKELQAFFGLQVTGKLDQTTMNVIKKPR 99

Query: 91  CGVTDTNSY 99
           CGV D  +Y
Sbjct: 100 CGVPDVANY 108


>gi|73808268 matrix metalloproteinase 27 [Homo sapiens]
          Length = 513

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 30 QELRKEAEAFLEKYGYLN---EQVPKAPTSTRFSDAIRAFQWVSQLPVSGVLDRATLRQM 86
          +E  + A+A+L ++  L      + ++   +   D IR  Q    L V+G LD  TL  M
Sbjct: 27 EENMQLAQAYLNQFYSLEIEGNHLVQSKNRSLIDDKIREMQAFFGLTVTGKLDSNTLEIM 86

Query: 87 TRPRCGVTDTNSY 99
            PRCGV D   Y
Sbjct: 87 KTPRCGVPDVGQY 99


>gi|73858572 matrix metalloproteinase 12 preproprotein [Homo
           sapiens]
          Length = 470

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)

Query: 37  EAFLEKYGYLNEQVPKAP-TSTRFS-----DAIRAFQWVSQLPVSGVLDRATLRQMTRPR 90
           E +LEK+  L  ++ K P T  ++S     + I+  Q    L V+G LD +TL  M  PR
Sbjct: 34  ERYLEKFYGL--EINKLPVTKMKYSGNLMKEKIQEMQHFLGLKVTGQLDTSTLEMMHAPR 91

Query: 91  CGVTDTNSY 99
           CGV D + +
Sbjct: 92  CGVPDVHHF 100


>gi|4505217 matrix metalloproteinase 3 preproprotein [Homo sapiens]
          Length = 477

 Score = 36.2 bits (82), Expect = 0.008
 Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 25  AERGGQELRKEAEAFLEKYGYLNEQVP---KAPTSTRFSDAIRAFQWVSQLPVSGVLDRA 81
           A RG        + +LE Y  L + V    +   S      IR  Q    L V+G LD  
Sbjct: 23  AARGEDTSMNLVQKYLENYYDLKKDVKQFVRRKDSGPVVKKIREMQKFLGLEVTGKLDSD 82

Query: 82  TLRQMTRPRCGVTDTNSY 99
           TL  M +PRCGV D   +
Sbjct: 83  TLEVMRKPRCGVPDVGHF 100


>gi|189217853 matrix metalloproteinase 2 isoform b [Homo sapiens]
          Length = 610

 Score = 33.5 bits (75), Expect = 0.049
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 61 DAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSY 99
          D ++  Q    LP +G LD+ T+  M +PRCG  D  +Y
Sbjct: 22 DTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANY 60


>gi|11342666 matrix metalloproteinase 2 isoform a preproprotein
           [Homo sapiens]
          Length = 660

 Score = 33.5 bits (75), Expect = 0.049
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 61  DAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSY 99
           D ++  Q    LP +G LD+ T+  M +PRCG  D  +Y
Sbjct: 72  DTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANY 110


>gi|4505221 matrix metalloproteinase 8 preproprotein [Homo
          sapiens]
          Length = 467

 Score = 30.8 bits (68), Expect = 0.32
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 5/96 (5%)

Query: 9  LRALQLLLWGHLDAQPA--ERGGQELRKEAEAFLEKYGYLNE---QVPKAPTSTRFSDAI 63
          L+ L  LL  H+    A      ++  K  + +LEK+  L     Q  +   +    + +
Sbjct: 4  LKTLPFLLLLHVQISKAFPVSSKEKNTKTVQDYLEKFYQLPSNQYQSTRKNGTNVIVEKL 63

Query: 64 RAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSY 99
          +  Q    L V+G  +  TL  M +PRCGV D+  +
Sbjct: 64 KEMQRFFGLNVTGKPNEETLDMMKKPRCGVPDSGGF 99


>gi|225543094 matrix metalloproteinase 1 isoform 2 [Homo sapiens]
          Length = 403

 Score = 29.3 bits (64), Expect = 0.92
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 72 LPVSGVLDRATLRQMTRPRCGVTDTNSY 99
          L V+G  D  TL+ M +PRCGV D   +
Sbjct: 7  LKVTGKPDAETLKVMKQPRCGVPDVAQF 34


>gi|45594240 limbic system-associated membrane protein [Homo
           sapiens]
          Length = 338

 Score = 28.5 bits (62), Expect = 1.6
 Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 7/49 (14%)

Query: 72  LPVSGV-----LDRATLRQMTRP--RCGVTDTNSYAAWAERISDLFARH 113
           LPV  V      D  T+RQ      RC V D NS  AW  R   +FA H
Sbjct: 27  LPVRSVDFNRGTDNITVRQGDTAILRCVVEDKNSKVAWLNRSGIIFAGH 75


>gi|162951877 scinderin isoform 1 [Homo sapiens]
          Length = 715

 Score = 27.3 bits (59), Expect = 3.5
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 11  ALQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGY-LNEQVPKAP 54
           A Q+ +W   DA P ER  +   K AE FL++  Y  N Q+   P
Sbjct: 290 AKQIFVWKGKDANPQER--KAAMKTAEEFLQQMNYSKNTQIQVLP 332


>gi|14916473 scinderin isoform 2 [Homo sapiens]
          Length = 468

 Score = 27.3 bits (59), Expect = 3.5
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 11 ALQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGY-LNEQVPKAP 54
          A Q+ +W   DA P ER  +   K AE FL++  Y  N Q+   P
Sbjct: 43 AKQIFVWKGKDANPQER--KAAMKTAEEFLQQMNYSKNTQIQVLP 85


>gi|71772838 sorting nexin 22 [Homo sapiens]
          Length = 193

 Score = 26.9 bits (58), Expect = 4.6
 Identities = 11/26 (42%), Positives = 19/26 (73%)

Query: 27 RGGQELRKEAEAFLEKYGYLNEQVPK 52
          RG ++ R+  EA+++   YLN++VPK
Sbjct: 74 RGLEQRRQGLEAYIQGILYLNQEVPK 99


>gi|221139926 NHS-like 1 [Homo sapiens]
          Length = 1606

 Score = 26.2 bits (56), Expect = 7.8
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 41  EKYGYLNEQVPKAPTSTRFSDAIRAFQWVSQLPV 74
           E+  +++ + PK P S+ FSD      W   LP+
Sbjct: 120 EEERFISIRRPKTPASSDFSDLNTQTNWTKSLPL 153


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,741,860
Number of Sequences: 37866
Number of extensions: 177499
Number of successful extensions: 507
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 476
Number of HSP's gapped (non-prelim): 34
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.