MMP28 3075

Name: MMP28	Sequence: fasta or formatted (520aa)		NCBI GI: 13236530
Description: matrix metalloproteinase 28 isoform 1 preproprotein		Referenced in: Metalloproteases
Other entries for this name: alt prot [130aa] matrix metalloproteinase 28 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.0 52 3 C cysteine 1.0 5 1 D aspartate 5.2 27 2 E glutamate 4.6 24 2 F phenylalanine 5.4 28 2 G glycine 9.0 47 2 H histidine 2.7 14 1 I isoleucine 2.1 11 2 K lysine 3.5 18 2 L leucine 11.0 57 3 M methionine 1.0 5 1 N asparagine 2.3 12 1 P proline 7.1 37 2 Q glutamine 4.8 25 3 R arginine 9.6 50 3 S serine 5.4 28 2 T threonine 3.5 18 2 V valine 5.0 26 2 W tryptophan 3.7 19 1 Y tyrosine 3.3 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 matrix metalloproteinase 28 isoform 1 preproprotein ... MMP28 0.216 matrix metalloproteinase 28 isoform 3 MMP19 0.216 matrix metalloproteinase 19 isoform rasi-1 preproprot... MMP24 0.207 matrix metalloproteinase 24 preproprotein MMP16 0.205 matrix metalloproteinase 16 isoform 1 preproprotein ... MMP15 0.198 matrix metalloproteinase 15 preproprotein MMP14 0.195 matrix metalloproteinase 14 preproprotein MMP17 0.179 matrix metalloproteinase 17 preproprotein MMP11 0.174 matrix metalloproteinase 11 preproprotein MMP25 0.171 matrix metalloproteinase 25 preproprotein MMP1 0.165 matrix metalloproteinase 1 isoform 1 preproprotein [H... MMP16 0.157 matrix metalloproteinase 16 isoform 2 preproprotein... MMP13 0.157 matrix metalloproteinase 13 preproprotein MMP1 0.156 matrix metalloproteinase 1 isoform 2 MMP12 0.155 matrix metalloproteinase 12 preproprotein MMP3 0.153 matrix metalloproteinase 3 preproprotein MMP20 0.153 matrix metalloproteinase 20 preproprotein MMP10 0.152 matrix metalloproteinase 10 preproprotein MMP8 0.138 matrix metalloproteinase 8 preproprotein MMP27 0.120 matrix metalloproteinase 27 MMP21 0.106 matrix metalloproteinase 21 preproprotein MMP7 0.101 matrix metalloproteinase 7 preproprotein MMP26 0.099 matrix metalloproteinase 26 preproprotein MMP23B 0.081 matrix metalloproteinase 23B precursor MMP2 0.072 matrix metalloproteinase 2 isoform b MMP2 0.072 matrix metalloproteinase 2 isoform a preproprotein [... LOC100289688 0.072 PREDICTED: hypothetical protein XP_002347374 MMP9 0.070 matrix metalloproteinase 9 preproprotein LOC100128088 0.025 PREDICTED: similar to hCG2042634 LOC100128088 0.025 PREDICTED: similar to hCG2042634 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.