TMPO 35394

Name: TMPO	Sequence: fasta or formatted (345aa)		NCBI GI: 73760401
Description: thymopoietin isoform gamma		Referenced in: Nucleus and Nucleolus Additional Interaction Domain Families
Other entries for this name: alt prot [694aa] thymopoietin isoform alpha alt prot [454aa] thymopoietin isoform beta
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 20 4 C cysteine 0.3 1 1 D aspartate 5.8 20 2 E glutamate 9.0 31 2 F phenylalanine 2.9 10 1 G glycine 5.2 18 1 H histidine 0.9 3 1 I isoleucine 2.6 9 1 K lysine 9.3 32 2 L leucine 9.6 33 2 M methionine 1.2 4 1 N asparagine 4.3 15 2 P proline 7.5 26 2 Q glutamine 3.2 11 1 R arginine 7.5 26 2 S serine 8.1 28 3 T threonine 6.4 22 2 V valine 7.5 26 3 W tryptophan 0.3 1 1 Y tyrosine 2.6 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 thymopoietin isoform gamma TMPO 0.629 thymopoietin isoform beta TMPO 0.537 thymopoietin isoform alpha EMD 0.056 emerin LEMD3 0.037 LEM domain containing 3 LEMD1 0.029 LEM domain containing 1 NOLC1 0.026 nucleolar and coiled-body phosphoprotein 1 THOC2 0.023 THO complex 2 ARL6IP4 0.021 SRp25 nuclear protein isoform 1 ANKLE2 0.021 ankyrin repeat and LEM domain containing 2 CCNI 0.020 cyclin I HOOK3 0.018 golgi-associated microtubule-binding protein HOOK3 [... ARL6IP4 0.015 SRp25 nuclear protein isoform 3 LOC100130506 0.015 PREDICTED: hypothetical protein LOC100288911 0.015 PREDICTED: hypothetical protein XP_002342241 SMARCC1 0.015 SWI/SNF-related matrix-associated actin-dependent r... ATRX 0.015 transcriptional regulator ATRX isoform 2 ATRX 0.015 transcriptional regulator ATRX isoform 1 RERE 0.015 atrophin-1 like protein isoform b RERE 0.015 atrophin-1 like protein isoform a RERE 0.015 atrophin-1 like protein isoform a ZFP37 0.015 zinc finger protein 37 homolog DSP 0.014 desmoplakin isoform I PHACTR3 0.014 phosphatase and actin regulator 3 isoform 3 PHACTR3 0.014 phosphatase and actin regulator 3 isoform 2 PHACTR3 0.014 phosphatase and actin regulator 3 isoform 1 MLLT3 0.014 myeloid/lymphoid or mixed-lineage leukemia (trithor... BOD1L 0.014 biorientation of chromosomes in cell division 1-like... KIAA1704 0.014 hypothetical protein LOC55425 SMARCA4 0.012 SWI/SNF-related matrix-associated actin-dependent r... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.