Guide to the Human Genome
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Name: PI16 Sequence: fasta or formatted (463aa) NCBI GI: 70780384
Description:

protease inhibitor 16 precursor

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         45           2
 C cysteine            2.6         12           1
 D aspartate           3.5         16           1
 E glutamate           8.4         39           2
 F phenylalanine       2.2         10           1
 G glycine             7.1         33           2
 H histidine           3.5         16           2
 I isoleucine          1.7          8           1
 K lysine              4.3         20           1
 L leucine            11.4         53           5
 M methionine          2.4         11           1
 N asparagine          2.8         13           1
 P proline             9.7         45           2
 Q glutamine           2.8         13           1
 R arginine            3.2         15           2
 S serine              8.9         41           2
 T threonine           7.1         33           2
 V valine              5.8         27           2
 W tryptophan          1.1          5           1
 Y tyrosine            1.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protease inhibitor 16 precursor 
CRISPLD2              0.118   cysteine-rich secretory protein LCCL domain containi...
GLIPR1                0.112   GLI pathogenesis-related 1 precursor 
R3HDML                0.109   R3H domain containing-like 
CRISPLD1              0.107   cysteine-rich secretory protein LCCL domain containi...
PI15                  0.107   protease inhibitor 15 preproprotein 
GLIPR1L1              0.102   GLI pathogenesis-related 1 like 1 
CRISP3                0.091   cysteine-rich secretory protein 3 
CRISP2                0.088   cysteine-rich secretory protein 2 
CRISP2                0.088   cysteine-rich secretory protein 2 
CRISP2                0.088   cysteine-rich secretory protein 2 
CRISP2                0.088   cysteine-rich secretory protein 2 
CRISP2                0.088   cysteine-rich secretory protein 2 
GLIPR1L2              0.081   GLI pathogenesis-related 1 like 2 
CLEC18B               0.080   C-type lectin domain family 18, member B 
CLEC18A               0.078   secretory protein LOC348174 
CLEC18A               0.078   secretory protein LOC348174 
CLEC18C               0.077   mannose receptor-like 
CRISP1                0.062   acidic epididymal glycoprotein-like 1 isoform 1 prec...
CRISP1                0.039   acidic epididymal glycoprotein-like 1 isoform 2 prec...
SRCAP                 0.025   Snf2-related CBP activator protein 
MUC2                  0.024   mucin 2 precursor 
ACAN                  0.024   aggrecan isoform 2 precursor 
ACAN                  0.024   aggrecan isoform 1 precursor 
GLIPR2                0.023   GLI pathogenesis-related 2 
LOC100134147          0.021   PREDICTED: hypothetical protein 
MUC12                 0.021   PREDICTED: mucin 12 
MUC12                 0.021   PREDICTED: mucin 12, cell surface associated 
MUC5B                 0.021   mucin 5, subtype B, tracheobronchial 
MUC7                  0.021   mucin 7, secreted precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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