Guide to the Human Genome
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Name: FLRT2 Sequence: fasta or formatted (660aa) NCBI GI: 7019381
Description:

fibronectin leucine rich transmembrane protein 2

Referenced in:

Fibronectin Family
Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         26           2
 C cysteine            2.3         15           1
 D aspartate           3.9         26           2
 E glutamate           4.5         30           2
 F phenylalanine       3.5         23           2
 G glycine             5.3         35           2
 H histidine           3.3         22           1
 I isoleucine          5.5         36           2
 K lysine              3.9         26           2
 L leucine            12.7         84           2
 M methionine          2.0         13           1
 N asparagine          7.1         47           2
 P proline             6.2         41           3
 Q glutamine           4.1         27           1
 R arginine            4.8         32           2
 S serine              8.9         59           2
 T threonine           7.1         47           3
 V valine              6.5         43           2
 W tryptophan          1.5         10           1
 Y tyrosine            2.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibronectin leucine rich transmembrane protein 2 [Hom... 
FLRT3                 0.421   fibronectin leucine rich transmembrane protein 3 pre...
FLRT3                 0.421   fibronectin leucine rich transmembrane protein 3 prec...
FLRT1                 0.390   fibronectin leucine rich transmembrane protein 1 [Ho...
CPN2                  0.088   carboxypeptidase N, polypeptide 2, 83kD 
LRRC15                0.081   leucine rich repeat containing 15 isoform a 
LRRC15                0.081   leucine rich repeat containing 15 isoform b 
LRRC4C                0.078   netrin-G1 ligand 
PODN                  0.076   podocan 
FMOD                  0.074   fibromodulin precursor 
LRRC70                0.074   synleurin 
LRRC4                 0.073   leucine rich repeat containing 4 
PODNL1                0.072   podocan-like 1 isoform 2 
PODNL1                0.072   podocan-like 1 isoform 1 
VASN                  0.072   slit-like 2 
ASPN                  0.070   asporin 
LRRC4B                0.069   leucine rich repeat containing 4B 
LRRTM3                0.065   leucine rich repeat transmembrane neuronal 3 
LRRN3                 0.064   leucine rich repeat neuronal 3 
LRRN3                 0.064   leucine rich repeat neuronal 3 
LRRN3                 0.064   leucine rich repeat neuronal 3 
LRIG3                 0.063   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.063   leucine-rich repeats and immunoglobulin-like domain...
LRRTM4                0.062   leucine rich repeat transmembrane neuronal 4 isofor...
LRRTM4                0.062   leucine rich repeat transmembrane neuronal 4 isofor...
LRIG2                 0.061   leucine-rich repeats and immunoglobulin-like domains ...
IGFALS                0.061   insulin-like growth factor binding protein, acid la...
IGFALS                0.061   insulin-like growth factor binding protein, acid labi...
DCN                   0.060   decorin isoform a preproprotein 
DCN                   0.060   decorin isoform a preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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