Name: ASPN | Sequence: fasta or formatted (380aa) | NCBI GI: 41350214 | |
Description: asporin
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Referenced in: Protein Composition and Structure
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 3.7 14 1 C cysteine 1.8 7 1 D aspartate 7.4 28 14 E glutamate 5.8 22 1 F phenylalanine 5.5 21 2 G glycine 4.2 16 1 H histidine 2.9 11 1 I isoleucine 5.8 22 2 K lysine 8.7 33 2 L leucine 13.4 51 3 M methionine 3.2 12 2 N asparagine 7.4 28 3 P proline 6.3 24 2 Q glutamine 2.1 8 1 R arginine 3.9 15 2 S serine 6.3 24 1 T threonine 4.5 17 2 V valine 4.5 17 2 W tryptophan 0.3 1 1 Y tyrosine 2.4 9 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 asporin BGN 0.498 biglycan preproprotein DCN 0.459 decorin isoform a preproprotein DCN 0.459 decorin isoform a preproprotein DCN 0.250 decorin isoform b precursor DCN 0.202 decorin isoform c precursor LUM 0.163 lumican precursor ECM2 0.154 extracellular matrix protein 2 precursor OMD 0.152 osteomodulin PRELP 0.150 proline arginine-rich end leucine-rich repeat protei... PRELP 0.150 proline arginine-rich end leucine-rich repeat protein... FLRT1 0.147 fibronectin leucine rich transmembrane protein 1 [Ho... KERA 0.139 keratocan FLRT3 0.134 fibronectin leucine rich transmembrane protein 3 pre... FLRT3 0.134 fibronectin leucine rich transmembrane protein 3 prec... PODNL1 0.132 podocan-like 1 isoform 2 PODNL1 0.132 podocan-like 1 isoform 1 FMOD 0.130 fibromodulin precursor FLRT2 0.123 fibronectin leucine rich transmembrane protein 2 [Hom... PODN 0.117 podocan LGR4 0.115 leucine-rich repeat-containing G protein-coupled re... LRRTM3 0.111 leucine rich repeat transmembrane neuronal 3 LRIG1 0.111 leucine-rich repeats and immunoglobulin-like domains... CHAD 0.109 chondroadherin precursor SLIT1 0.104 slit homolog 1 LRRC70 0.104 synleurin LRRC15 0.103 leucine rich repeat containing 15 isoform a LRRC15 0.103 leucine rich repeat containing 15 isoform b LRRTM4 0.101 leucine rich repeat transmembrane neuronal 4 isofor... LRRTM4 0.101 leucine rich repeat transmembrane neuronal 4 isofor...Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.