Guide to the Human Genome
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Name: OR7A17 Sequence: fasta or formatted (309aa) NCBI GI: 13775162
Description:

olfactory receptor, family 7, subfamily A, member 17

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         23           2
 C cysteine            3.9         12           2
 D aspartate           2.9          9           1
 E glutamate           2.6          8           2
 F phenylalanine       6.8         21           2
 G glycine             5.5         17           2
 H histidine           2.9          9           1
 I isoleucine          7.1         22           2
 K lysine              2.6          8           1
 L leucine            14.9         46           3
 M methionine          4.5         14           1
 N asparagine          3.6         11           1
 P proline             3.6         11           1
 Q glutamine           2.6          8           1
 R arginine            2.3          7           1
 S serine             10.4         32           2
 T threonine           6.5         20           2
 V valine              5.8         18           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 7, subfamily A, member 17... 
OR7A10                0.820   olfactory receptor, family 7, subfamily A, member 10...
OR7A5                 0.774   olfactory receptor, family 7, subfamily A, member 5 [...
OR7D4                 0.666   olfactory receptor, family 7, subfamily D, member 4 ...
OR7C1                 0.654   olfactory receptor, family 7, subfamily C, member 1 ...
OR7C2                 0.651   olfactory receptor, family 7, subfamily C, member 2 ...
OR7D2                 0.651   olfactory receptor, family 7, subfamily D, member 2 ...
OR7G2                 0.639   olfactory receptor, family 7, subfamily G, member 2 ...
OR7E24                0.621   olfactory receptor, family 7, subfamily E, member 2...
OR7G3                 0.614   olfactory receptor, family 7, subfamily G, member 3 ...
OR7G1                 0.594   olfactory receptor, family 7, subfamily G, member 1 ...
OR1G1                 0.541   olfactory receptor, family 1, subfamily G, member 1 ...
OR1M1                 0.523   olfactory receptor, family 1, subfamily M, member 1 ...
OR1E1                 0.516   olfactory receptor, family 1, subfamily E, member 1...
OR1N2                 0.511   olfactory receptor, family 1, subfamily N, member 2 ...
OR1J4                 0.503   olfactory receptor, family 1, subfamily J, member 4 ...
OR1F1                 0.503   olfactory receptor, family 1, subfamily F, member 1 [...
OR1C1                 0.499   olfactory receptor, family 1, subfamily C, member 1...
OR1J1                 0.494   olfactory receptor, family 1, subfamily J, member 1 ...
OR1N1                 0.491   olfactory receptor, family 1, subfamily N, member 1 ...
OR1E2                 0.489   olfactory receptor, family 1, subfamily E, member 2 ...
OR1J2                 0.487   olfactory receptor, family 1, subfamily J, member 2 ...
OR1S1                 0.482   olfactory receptor, family 1, subfamily S, member 1 ...
OR1I1                 0.481   olfactory receptor, family 1, subfamily I, member 1 ...
OR1S2                 0.477   olfactory receptor, family 1, subfamily S, member 2 ...
OR1L4                 0.462   olfactory receptor, family 1, subfamily L, member 4 ...
OR1L6                 0.460   olfactory receptor, family 1, subfamily L, member 6 ...
OR1D4                 0.459   olfactory receptor, family 1, subfamily D, member 4...
OR1D2                 0.459   olfactory receptor, family 1, subfamily D, member 2 [...
OR1D5                 0.455   olfactory receptor, family 1, subfamily D, member 5 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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