Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR1D4 Sequence: fasta or formatted (330aa) NCBI GI: 119943143
Description:

olfactory receptor, family 1, subfamily D, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         18           1
 C cysteine            3.0         10           2
 D aspartate           2.7          9           1
 E glutamate           1.2          4           1
 F phenylalanine       6.1         20           2
 G glycine             4.8         16           2
 H histidine           3.0         10           1
 I isoleucine          5.5         18           2
 K lysine              3.0         10           2
 L leucine            17.0         56           3
 M methionine          5.5         18           2
 N asparagine          3.6         12           1
 P proline             3.9         13           1
 Q glutamine           3.6         12           3
 R arginine            3.0         10           1
 S serine              7.6         25           2
 T threonine           7.3         24           2
 V valine              7.3         24           2
 W tryptophan          1.2          4           1
 Y tyrosine            5.2         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 1, subfamily D, member 4... 
OR1D5                 0.935   olfactory receptor, family 1, subfamily D, member 5 [...
OR1D2                 0.774   olfactory receptor, family 1, subfamily D, member 2 [...
OR1N2                 0.472   olfactory receptor, family 1, subfamily N, member 2 ...
OR7D4                 0.455   olfactory receptor, family 7, subfamily D, member 4 ...
OR7C1                 0.455   olfactory receptor, family 7, subfamily C, member 1 ...
OR1F1                 0.453   olfactory receptor, family 1, subfamily F, member 1 [...
OR7D2                 0.445   olfactory receptor, family 7, subfamily D, member 2 ...
OR1N1                 0.444   olfactory receptor, family 1, subfamily N, member 1 ...
OR1L1                 0.442   olfactory receptor, family 1, subfamily L, member 1...
OR7A5                 0.441   olfactory receptor, family 7, subfamily A, member 5 [...
OR1E1                 0.438   olfactory receptor, family 1, subfamily E, member 1...
OR1L8                 0.438   olfactory receptor, family 1, subfamily L, member 8 ...
OR1G1                 0.438   olfactory receptor, family 1, subfamily G, member 1 ...
OR7A10                0.438   olfactory receptor, family 7, subfamily A, member 10...
OR7C2                 0.436   olfactory receptor, family 7, subfamily C, member 2 ...
OR7G2                 0.435   olfactory receptor, family 7, subfamily G, member 2 ...
OR1M1                 0.431   olfactory receptor, family 1, subfamily M, member 1 ...
OR1E2                 0.425   olfactory receptor, family 1, subfamily E, member 2 ...
OR7A17                0.424   olfactory receptor, family 7, subfamily A, member 17...
OR7G3                 0.419   olfactory receptor, family 7, subfamily G, member 3 ...
OR1A1                 0.414   olfactory receptor, family 1, subfamily A, member 1 [...
OR1J4                 0.414   olfactory receptor, family 1, subfamily J, member 4 ...
OR1I1                 0.414   olfactory receptor, family 1, subfamily I, member 1 ...
OR1L4                 0.414   olfactory receptor, family 1, subfamily L, member 4 ...
OR1Q1                 0.413   olfactory receptor, family 1, subfamily Q, member 1 ...
OR1L6                 0.413   olfactory receptor, family 1, subfamily L, member 6 ...
OR1L3                 0.413   olfactory receptor, family 1, subfamily L, member 3 ...
OR1S1                 0.410   olfactory receptor, family 1, subfamily S, member 1 ...
OR7E24                0.407   olfactory receptor, family 7, subfamily E, member 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press