BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|6912274 brain-specific membrane-anchored protein precursor [Homo sapiens] (342 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|6912274 brain-specific membrane-anchored protein precursor [H... 703 0.0 gi|20070191 thymic dendritic cell-derived factor 1 [Homo sapiens] 156 2e-38 gi|153792110 HEG homolog 1 [Homo sapiens] 33 0.28 gi|5454086 sushi-repeat-containing protein, X-linked [Homo sapiens] 33 0.37 gi|54607018 RYK receptor-like tyrosine kinase isoform 2 [Homo sa... 32 1.1 gi|54607020 RYK receptor-like tyrosine kinase isoform 1 [Homo sa... 32 1.1 gi|13994335 Mix-like homeobox protein 1 [Homo sapiens] 31 1.8 gi|237820711 lymphocyte antigen 6 complex, locus K isoform 1 [Ho... 30 2.4 gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi... 30 3.1 gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapi... 30 3.1 gi|51317380 D-glucuronyl C5-epimerase [Homo sapiens] 30 3.1 gi|4505891 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 pr... 30 4.1 gi|157384971 cyclin G associated kinase [Homo sapiens] 30 4.1 gi|162461738 guanine nucleotide binding protein, alpha activatin... 30 4.1 gi|10567816 guanine nucleotide binding protein, alpha activating... 30 4.1 gi|4504217 guanylate cyclase 2D, membrane (retina-specific) [Hom... 29 5.3 gi|21450721 enkurin [Homo sapiens] 29 5.3 gi|13376888 hole protein [Homo sapiens] 29 5.3 gi|226342935 podocan-like 1 isoform 3 [Homo sapiens] 29 7.0 gi|226342933 podocan-like 1 isoform 2 [Homo sapiens] 29 7.0 gi|226342931 podocan-like 1 isoform 1 [Homo sapiens] 29 7.0 gi|19923122 cholinergic receptor, nicotinic, alpha 3 [Homo sapiens] 29 7.0 gi|239756716 PREDICTED: hypothetical protein XP_002345022 [Homo ... 28 9.1 gi|239751211 PREDICTED: hypothetical protein XP_002347748 [Homo ... 28 9.1 gi|239740999 PREDICTED: hypothetical protein [Homo sapiens] 28 9.1 >gi|6912274 brain-specific membrane-anchored protein precursor [Homo sapiens] Length = 342 Score = 703 bits (1814), Expect = 0.0 Identities = 342/342 (100%), Positives = 342/342 (100%) Query: 1 MAAVALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGL 60 MAAVALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGL Sbjct: 1 MAAVALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGL 60 Query: 61 EGASESPYDRAVLISACERGCRLFSICRFVARSSKPNATQTECEAACVEAYVKEAEQQAC 120 EGASESPYDRAVLISACERGCRLFSICRFVARSSKPNATQTECEAACVEAYVKEAEQQAC Sbjct: 61 EGASESPYDRAVLISACERGCRLFSICRFVARSSKPNATQTECEAACVEAYVKEAEQQAC 120 Query: 121 SHGCWSQPAEPEPEQKRKVLEAPSGALSLLDLFSTLCNDLVNSAQGFVSSTWTYYLQTDN 180 SHGCWSQPAEPEPEQKRKVLEAPSGALSLLDLFSTLCNDLVNSAQGFVSSTWTYYLQTDN Sbjct: 121 SHGCWSQPAEPEPEQKRKVLEAPSGALSLLDLFSTLCNDLVNSAQGFVSSTWTYYLQTDN 180 Query: 181 GKVVVFQTQPIVESLGFQGGRLQRVEVTWRGSHPEALEVHVDPVGPLDKVRKAKIRVKTS 240 GKVVVFQTQPIVESLGFQGGRLQRVEVTWRGSHPEALEVHVDPVGPLDKVRKAKIRVKTS Sbjct: 181 GKVVVFQTQPIVESLGFQGGRLQRVEVTWRGSHPEALEVHVDPVGPLDKVRKAKIRVKTS 240 Query: 241 SKAKVESEEPQDNDFLSCMSRRSGLPRWILACCLFLSVLVMLWLSCSTLVTAPGQHLKFQ 300 SKAKVESEEPQDNDFLSCMSRRSGLPRWILACCLFLSVLVMLWLSCSTLVTAPGQHLKFQ Sbjct: 241 SKAKVESEEPQDNDFLSCMSRRSGLPRWILACCLFLSVLVMLWLSCSTLVTAPGQHLKFQ 300 Query: 301 PLTLEQHKGFMMEPDWPLYPPPSHACEDSLPPYKLKLDLTKL 342 PLTLEQHKGFMMEPDWPLYPPPSHACEDSLPPYKLKLDLTKL Sbjct: 301 PLTLEQHKGFMMEPDWPLYPPPSHACEDSLPPYKLKLDLTKL 342 >gi|20070191 thymic dendritic cell-derived factor 1 [Homo sapiens] Length = 323 Score = 156 bits (395), Expect = 2e-38 Identities = 104/319 (32%), Positives = 160/319 (50%), Gaps = 41/319 (12%) Query: 7 MPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQNCQLRCR-DRDLGPQPSQAGLEGASE 65 +PP LLL + LA S ++ + F LGDT +C C+ L P + L Sbjct: 16 LPPLLLLTMALAG---GSGTASAEAFDSVLGDTASCHRACQLTYPLHTYPKEEELY---- 68 Query: 66 SPYDRAVLISACERGCRLFSICRFVARSSKPNATQTECEAACVEAYVKEAEQQACSHGCW 125 AC+RGCRLFSIC+FV N T+ ECE+AC EAY + EQ AC GC Sbjct: 69 ----------ACQRGCRLFSICQFVDDGIDLNRTKLECESACTEAYSQSDEQYACHLGCQ 118 Query: 126 SQPAEPEPEQKRKVLEAPSGALSL-LDLFSTLCNDLVNSAQGFVSSTWTYYLQTDNGKVV 184 +Q E Q++ + P L L L + +D+++SAQ F++S+WT+YLQ D+GK+V Sbjct: 119 NQLPFAELRQEQLMSLMPKMHLLFPLTLVRSFWSDMMDSAQSFITSSWTFYLQADDGKIV 178 Query: 185 VFQTQPIVESLGFQGGRLQRVEVTWRGSHPEALEVHVDPVGPLDKVRKAKIRVKTSSKAK 244 +FQ++P ++ + LE + + + ++++ S + Sbjct: 179 IFQSKPEIQ-------------------YAPHLEQEPTNLRESSLSKMSYLQMRNSQAHR 219 Query: 245 VESEEPQDNDFLSCMSRRSGLPRWILACCLFLSVLVMLWLSCSTLVTAPGQHLKFQPLTL 304 E+ + + FL C+S SG WIL L LSV+V+LW+ C+T+ TA Q++ + L++ Sbjct: 220 NFLEDGESDGFLRCLSLNSG---WILTTTLVLSVMVLLWICCATVATAVEQYVPSEKLSI 276 Query: 305 EQHKGFMMEPDWPLYPPPS 323 FM E YP S Sbjct: 277 YGDLEFMNEQKLNRYPASS 295 >gi|153792110 HEG homolog 1 [Homo sapiens] Length = 1381 Score = 33.5 bits (75), Expect = 0.28 Identities = 31/77 (40%), Positives = 35/77 (45%), Gaps = 15/77 (19%) Query: 8 PPPLLLLL--LLASPPAASAPSARDP----------FAPQLGDTQNCQLRCR-DRDLGPQ 54 PPPLLLLL LL PPA AP RDP AP G QL R +R+ P Sbjct: 10 PPPLLLLLLPLLLLPPA--APGTRDPPPSPARRALSLAPLAGAGLELQLERRPEREPPPT 67 Query: 55 PSQAGLEGASESPYDRA 71 P + A+ P RA Sbjct: 68 PPRERRGPATPGPSYRA 84 >gi|5454086 sushi-repeat-containing protein, X-linked [Homo sapiens] Length = 464 Score = 33.1 bits (74), Expect = 0.37 Identities = 16/28 (57%), Positives = 20/28 (71%) Query: 3 AVALMPPPLLLLLLLASPPAASAPSARD 30 A+ L+ PPLLLLLLL PP+ S P + D Sbjct: 9 ALLLLLPPLLLLLLLRVPPSRSFPGSGD 36 >gi|54607018 RYK receptor-like tyrosine kinase isoform 2 [Homo sapiens] Length = 607 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 4/28 (14%) Query: 8 PPPLLLLL----LLASPPAASAPSARDP 31 PPPLLLLL LL +P AA+AP+ R P Sbjct: 26 PPPLLLLLALLPLLPAPGAAAAPAPRPP 53 >gi|54607020 RYK receptor-like tyrosine kinase isoform 1 [Homo sapiens] Length = 610 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 4/28 (14%) Query: 8 PPPLLLLL----LLASPPAASAPSARDP 31 PPPLLLLL LL +P AA+AP+ R P Sbjct: 26 PPPLLLLLALLPLLPAPGAAAAPAPRPP 53 >gi|13994335 Mix-like homeobox protein 1 [Homo sapiens] Length = 232 Score = 30.8 bits (68), Expect = 1.8 Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 15/78 (19%) Query: 2 AAVALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGLE 61 A AL+PPP LL +PPA P+ FA LG RD GP P Sbjct: 25 AGGALLPPPSPAAALLPAPPAGPGPAT---FAGFLG-----------RDPGPAPPPPASL 70 Query: 62 GASESPYDRAVLISACER 79 G S +P A SA +R Sbjct: 71 G-SPAPPKGAAAPSASQR 87 >gi|237820711 lymphocyte antigen 6 complex, locus K isoform 1 [Homo sapiens] Length = 165 Score = 30.4 bits (67), Expect = 2.4 Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 23/108 (21%) Query: 41 NCQLRCRDRDLGPQPSQAGLEGASESPYDRAVLISACERG----CRLFSICRFVARSSKP 96 + L R RD P+ SQ EG D V CER C+ C++ Sbjct: 18 DANLTARQRD--PEDSQRTDEG------DNRVWCHVCERENTFECQNPRRCKW------- 62 Query: 97 NATQTECEAACVEAYVKE-AEQQACSHGCWSQPAEPEPEQKRKVLEAP 143 T+ C A V+ + + + CS GC + P+PE+KR +LE P Sbjct: 63 --TEPYCVIAAVKIFPRFFMVAKQCSAGCAAME-RPKPEEKRFLLEEP 107 >gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapiens] Length = 547 Score = 30.0 bits (66), Expect = 3.1 Identities = 39/150 (26%), Positives = 56/150 (37%), Gaps = 27/150 (18%) Query: 11 LLLLLLLASPPA--ASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGLEGASESPY 68 L L LLLA PP+ A AP A+ P AP + RCR + G + P+ Sbjct: 24 LRLALLLARPPSGRAGAPEAQGPAAPGTTAPEGGD-RCR--------GYYDVMGQWDPPF 74 Query: 69 DRAVLISACERGCRLFSIC------RFVARSSKPNATQTECEAACVEAYVKEAEQQACSH 122 + C G +S C RF Q+ C A+V+ A + Sbjct: 75 N-------CSSGA--YSFCCGTCGYRFCCHDGPRRLDQSRCSNYDTPAWVQTGRPPARAR 125 Query: 123 GCWSQPAEPEPEQKRKVLEAPSGALSLLDL 152 + P +P E+ + A G +LL L Sbjct: 126 DT-AAPRDPGRERSHTAVYAVCGVAALLVL 154 >gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapiens] Length = 492 Score = 30.0 bits (66), Expect = 3.1 Identities = 39/150 (26%), Positives = 56/150 (37%), Gaps = 27/150 (18%) Query: 11 LLLLLLLASPPA--ASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGLEGASESPY 68 L L LLLA PP+ A AP A+ P AP + RCR + G + P+ Sbjct: 24 LRLALLLARPPSGRAGAPEAQGPAAPGTTAPEGGD-RCR--------GYYDVMGQWDPPF 74 Query: 69 DRAVLISACERGCRLFSIC------RFVARSSKPNATQTECEAACVEAYVKEAEQQACSH 122 + C G +S C RF Q+ C A+V+ A + Sbjct: 75 N-------CSSGA--YSFCCGTCGYRFCCHDGPRRLDQSRCSNYDTPAWVQTGRPPARAR 125 Query: 123 GCWSQPAEPEPEQKRKVLEAPSGALSLLDL 152 + P +P E+ + A G +LL L Sbjct: 126 DT-AAPRDPGRERSHTAVYAVCGVAALLVL 154 >gi|51317380 D-glucuronyl C5-epimerase [Homo sapiens] Length = 617 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/33 (36%), Positives = 18/33 (54%) Query: 256 LSCMSRRSGLPRWILACCLFLSVLVMLWLSCST 288 + C++ R I+ C LF V V+LW CS+ Sbjct: 1 MRCLAARVNYKTLIIICALFTLVTVLLWNKCSS 33 >gi|4505891 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 precursor [Homo sapiens] Length = 738 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Query: 9 PPLLLLLLLASPPAASA---PSARDPFAPQ 35 P LLLL L PPAASA P RDP P+ Sbjct: 8 PRFLLLLPLLLPPAASASDRPRGRDPVNPE 37 >gi|157384971 cyclin G associated kinase [Homo sapiens] Length = 1311 Score = 29.6 bits (65), Expect = 4.1 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 12/56 (21%) Query: 8 PPPLLLL---LLLASP---------PAASAPSARDPFAPQLGDTQNCQLRCRDRDL 51 PP LL LLLASP P P+A DPF P L + N C + DL Sbjct: 925 PPEDLLSEDPLLLASPAPPLSVQSTPRGGPPAAADPFGPLLPSSGNNSQPCSNPDL 980 >gi|162461738 guanine nucleotide binding protein, alpha activating polypeptide O isoform b [Homo sapiens] Length = 354 Score = 29.6 bits (65), Expect = 4.1 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Query: 179 DNGKVVVFQTQPIVESLGFQGGRLQRVEVTWRGSHPEALEVHVDPVGPL-----DKVRKA 233 ++GK + + I+ GF G +++ + + ++L V + L DK RKA Sbjct: 43 ESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERKA 102 Query: 234 KIRVKTSSKAKVESEEPQDNDFLSCMSRRSG 264 ++ +++E EP + LS M R G Sbjct: 103 DAKMVCDVVSRMEDTEPFSAELLSAMMRLWG 133 >gi|10567816 guanine nucleotide binding protein, alpha activating polypeptide O isoform a [Homo sapiens] Length = 354 Score = 29.6 bits (65), Expect = 4.1 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Query: 179 DNGKVVVFQTQPIVESLGFQGGRLQRVEVTWRGSHPEALEVHVDPVGPL-----DKVRKA 233 ++GK + + I+ GF G +++ + + ++L V + L DK RKA Sbjct: 43 ESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERKA 102 Query: 234 KIRVKTSSKAKVESEEPQDNDFLSCMSRRSG 264 ++ +++E EP + LS M R G Sbjct: 103 DAKMVCDVVSRMEDTEPFSAELLSAMMRLWG 133 >gi|4504217 guanylate cyclase 2D, membrane (retina-specific) [Homo sapiens] Length = 1103 Score = 29.3 bits (64), Expect = 5.3 Identities = 38/132 (28%), Positives = 49/132 (37%), Gaps = 16/132 (12%) Query: 5 ALMPPPLLLLLLLASPPAASA--------PSARDPFAPQLGDTQNCQLRCRDRDLGPQPS 56 AL PLLLLLLL PPA SA P A DP + +L + P Sbjct: 32 ALPRLPLLLLLLLLQPPALSAVFTVGVLGPWACDPIFSRARPDLAARLAAARLNRDP--- 88 Query: 57 QAGLEGASESPYDRAVLISACERGCRLFSICRFVARSSKPNATQTECEAACVEAYVKEAE 116 GL G ++ A+L C L ++ +AR S E +EA Sbjct: 89 --GLAGGPR--FEVALLPEPCRTPGSLGAVSSALARVSGLVGPVNPAACRPAELLAEEAG 144 Query: 117 QQACSHGC-WSQ 127 GC W+Q Sbjct: 145 IALVPWGCPWTQ 156 >gi|21450721 enkurin [Homo sapiens] Length = 256 Score = 29.3 bits (64), Expect = 5.3 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Query: 228 DKVRKAKIRVKTSSKAKVESEEPQDNDFLSCMSRRSGLP 266 D ++KAK +KT AKVE P+ DFL S+ LP Sbjct: 37 DDMQKAKTAMKTMGPAKVEVPSPK--DFLKKHSKEKTLP 73 >gi|13376888 hole protein [Homo sapiens] Length = 319 Score = 29.3 bits (64), Expect = 5.3 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 262 RSGLPRWILACCLFLSVLVMLWLSCSTL--VTAPGQHLKFQPLTL 304 RSGLP W F +++L L C L V+ G+H+ Q + L Sbjct: 172 RSGLPLWAEGLTFFYCYMLLLVLPCVALSEVSMQGEHIAPQKMML 216 >gi|226342935 podocan-like 1 isoform 3 [Homo sapiens] Length = 421 Score = 28.9 bits (63), Expect = 7.0 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%) Query: 9 PPLLLLLLLASPPAASAPSARDPFAPQLGDT-----QNCQLRC 46 P LLLLLLL PP + D P LG++ + C LRC Sbjct: 8 PSLLLLLLLPGPPPVA--GLEDAAFPHLGESLQPLPRACPLRC 48 >gi|226342933 podocan-like 1 isoform 2 [Homo sapiens] Length = 510 Score = 28.9 bits (63), Expect = 7.0 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%) Query: 9 PPLLLLLLLASPPAASAPSARDPFAPQLGDT-----QNCQLRC 46 P LLLLLLL PP + D P LG++ + C LRC Sbjct: 8 PSLLLLLLLPGPPPVA--GLEDAAFPHLGESLQPLPRACPLRC 48 >gi|226342931 podocan-like 1 isoform 1 [Homo sapiens] Length = 512 Score = 28.9 bits (63), Expect = 7.0 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 8/50 (16%) Query: 2 AAVALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDT-----QNCQLRC 46 + +A+ P LLLLLL PP A D P LG++ + C LRC Sbjct: 4 SGLAMWPSLLLLLLLPGPPPVA---GLEDAAFPHLGESLQPLPRACPLRC 50 >gi|19923122 cholinergic receptor, nicotinic, alpha 3 [Homo sapiens] Length = 505 Score = 28.9 bits (63), Expect = 7.0 Identities = 17/38 (44%), Positives = 21/38 (55%) Query: 4 VALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQN 41 +AL PP LLLLLLL+ P A A A +L + N Sbjct: 10 LALSPPRLLLLLLLSLLPVARASEAEHRLFERLFEDYN 47 >gi|239756716 PREDICTED: hypothetical protein XP_002345022 [Homo sapiens] Length = 208 Score = 28.5 bits (62), Expect = 9.1 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%) Query: 124 CWSQPAEPEPEQKRKVLEAPSGALSLLDL 152 CWS P E KRK L AP G SL L Sbjct: 146 CWSHPLRRR-EGKRKTLSAPQGGSSLRTL 173 >gi|239751211 PREDICTED: hypothetical protein XP_002347748 [Homo sapiens] Length = 208 Score = 28.5 bits (62), Expect = 9.1 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%) Query: 124 CWSQPAEPEPEQKRKVLEAPSGALSLLDL 152 CWS P E KRK L AP G SL L Sbjct: 146 CWSHPLRRR-EGKRKTLSAPQGGSSLRTL 173 >gi|239740999 PREDICTED: hypothetical protein [Homo sapiens] Length = 249 Score = 28.5 bits (62), Expect = 9.1 Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Query: 19 SPPAASAPSARDPFAPQLGDTQNCQLRCRD 48 S PA ARDP AP+ G C RCRD Sbjct: 165 SKPAEPPAPARDP-APRRGRLARCWARCRD 193 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.133 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,742,724 Number of Sequences: 37866 Number of extensions: 764504 Number of successful extensions: 2808 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 2782 Number of HSP's gapped (non-prelim): 34 length of query: 342 length of database: 18,247,518 effective HSP length: 103 effective length of query: 239 effective length of database: 14,347,320 effective search space: 3429009480 effective search space used: 3429009480 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.